RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 FNBP4Q8N3X1 1017 aaPredicted RBP19.06■□□□□ 0.64
APOBEC3B-202ENST00000335760 IP6K1Q92551 441 aa19.06■□□□□ 0.64
APOBEC3B-202ENST00000335760 SLIT2O94813 1529 aa19.06■□□□□ 0.64
APOBEC3B-202ENST00000335760 CAMTA1Q9Y6Y1 1673 aa19.06■□□□□ 0.64
APOBEC3B-202ENST00000335760 RGPD5Q99666 1765 aa19.06■□□□□ 0.64
APOBEC3B-202ENST00000335760 ABCC6O95255 1503 aa19.06■□□□□ 0.64
APOBEC3B-202ENST00000335760 PPP2R1AP30153 589 aa19.06■□□□□ 0.64
APOBEC3B-202ENST00000335760 PRKRIP1Q9H875 184 aaPredicted RBP19.06■□□□□ 0.64
APOBEC3B-202ENST00000335760 RTL1A6NKG5 1358 aa19.05■□□□□ 0.64
APOBEC3B-202ENST00000335760 NWD2Q9ULI1 1742 aa19.05■□□□□ 0.64
APOBEC3B-202ENST00000335760 ANP32CO43423 234 aa19.05■□□□□ 0.64
APOBEC3B-202ENST00000335760 USP21Q9UK80 565 aa19.05■□□□□ 0.64
APOBEC3B-202ENST00000335760 FLT4P35916 1363 aa19.05■□□□□ 0.64
APOBEC3B-202ENST00000335760 KIF24Q5T7B8 1368 aa19.05■□□□□ 0.64
APOBEC3B-202ENST00000335760 SMG6Q86US8 1419 aaKnown RBP19.04■□□□□ 0.64
APOBEC3B-202ENST00000335760 MTHFSP49914 203 aa19.04■□□□□ 0.64
APOBEC3B-202ENST00000335760 EVA1CP58658 441 aa19.04■□□□□ 0.64
APOBEC3B-202ENST00000335760 STRN4Q9NRL3 753 aa19.04■□□□□ 0.64
APOBEC3B-202ENST00000335760 BCL9LQ86UU0 1499 aa19.03■□□□□ 0.64
APOBEC3B-202ENST00000335760 HSP90AB2PQ58FF8 381 aa19.03■□□□□ 0.64
APOBEC3B-202ENST00000335760 UNC5CLQ8IV45 518 aa19.03■□□□□ 0.64
APOBEC3B-202ENST00000335760 NRAPQ86VF7 1730 aa19.03■□□□□ 0.64
APOBEC3B-202ENST00000335760 BLMP54132 1417 aaPredicted RBP19.02■□□□□ 0.64
APOBEC3B-202ENST00000335760 COL5A2P05997 1499 aaPredicted RBP19.02■□□□□ 0.64
APOBEC3B-202ENST00000335760 LTV1Q96GA3 475 aaPredicted RBP19.02■□□□□ 0.64
APOBEC3B-202ENST00000335760 INSRP06213 1382 aa19.01■□□□□ 0.63
APOBEC3B-202ENST00000335760 DIEXFQ68CQ4 756 aaKnown RBP19.01■□□□□ 0.63
APOBEC3B-202ENST00000335760 ANKRD24Q8TF21 1146 aa19.01■□□□□ 0.63
APOBEC3B-202ENST00000335760 MYBBP1AQ9BQG0 1328 aaKnown RBP19.01■□□□□ 0.63
APOBEC3B-202ENST00000335760 CDK12Q9NYV4 1490 aaPredicted RBP19■□□□□ 0.63
APOBEC3B-202ENST00000335760 CSB-PGBD3P0DP91 1061 aa19■□□□□ 0.63
APOBEC3B-202ENST00000335760 ZNF772Q68DY9 489 aaPredicted RBP19■□□□□ 0.63
APOBEC3B-202ENST00000335760 TNKS1BP1Q9C0C2 1729 aaKnown RBP19■□□□□ 0.63
APOBEC3B-202ENST00000335760 LARP1Q6PKG0 1096 aaKnown RBP18.98■□□□□ 0.63
APOBEC3B-202ENST00000335760 ERBB3P21860 1342 aa18.98■□□□□ 0.63
APOBEC3B-202ENST00000335760 TRPC5Q9UL62 973 aaPredicted RBP18.97■□□□□ 0.63
APOBEC3B-202ENST00000335760 CCDC9Q9Y3X0 531 aaKnown RBP18.97■□□□□ 0.63
APOBEC3B-202ENST00000335760 WDR17Q8IZU2 1322 aa18.97■□□□□ 0.63
APOBEC3B-202ENST00000335760 VPS72Q15906 364 aa18.96■□□□□ 0.63
APOBEC3B-202ENST00000335760 TOM1L2Q6ZVM7 507 aa18.96■□□□□ 0.63
APOBEC3B-202ENST00000335760 CFAP53Q96M91 514 aa18.96■□□□□ 0.63
APOBEC3B-202ENST00000335760 QTRT2Q9H974 415 aaKnown RBP18.96■□□□□ 0.63
APOBEC3B-202ENST00000335760 RGS17Q9UGC6 210 aaPredicted RBP18.96■□□□□ 0.63
APOBEC3B-202ENST00000335760 EIF4A2Q14240 407 aaKnown RBP18.95■□□□□ 0.62
APOBEC3B-202ENST00000335760 ATRNO75882 1429 aa18.95■□□□□ 0.62
APOBEC3B-202ENST00000335760 NLRP2Q9NX02 1062 aa18.94■□□□□ 0.62
APOBEC3B-202ENST00000335760 CRB1P82279 1406 aa18.94■□□□□ 0.62
APOBEC3B-202ENST00000335760 FAM208AQ9UK61 1670 aaKnown RBP18.93■□□□□ 0.62
APOBEC3B-202ENST00000335760 DIAPH1O60610 1272 aaKnown RBP18.93■□□□□ 0.62
APOBEC3B-202ENST00000335760 USP35Q9P2H5 1018 aa18.93■□□□□ 0.62
APOBEC3B-202ENST00000335760 SPATA31A5Q5VU36 1347 aa18.93■□□□□ 0.62
APOBEC3B-202ENST00000335760 SPATA31A7Q8IWB4 1347 aa18.93■□□□□ 0.62
APOBEC3B-202ENST00000335760 COL3A1P02461 1466 aaPredicted RBP18.92■□□□□ 0.62
APOBEC3B-202ENST00000335760 RGPD2P0DJD1 1756 aa18.92■□□□□ 0.62
APOBEC3B-202ENST00000335760 IL13P35225 146 aa18.92■□□□□ 0.62
APOBEC3B-202ENST00000335760 SPATA31A1Q5TZJ5 1347 aa18.92■□□□□ 0.62
APOBEC3B-202ENST00000335760 CARD10Q9BWT7 1032 aa18.92■□□□□ 0.62
APOBEC3B-202ENST00000335760 NBPF6Q5VWK0 638 aa18.91■□□□□ 0.62
APOBEC3B-202ENST00000335760 POTEAQ6S8J7 498 aa18.91■□□□□ 0.62
APOBEC3B-202ENST00000335760 GJD4Q96KN9 370 aaPredicted RBP18.91■□□□□ 0.62
APOBEC3B-202ENST00000335760 NBPF4Q96M43 638 aa18.91■□□□□ 0.62
APOBEC3B-202ENST00000335760 USHBP1Q8N6Y0 703 aa18.9■□□□□ 0.62
APOBEC3B-202ENST00000335760 EYA1Q99502 592 aa18.9■□□□□ 0.62
APOBEC3B-202ENST00000335760 TCP11L2Q8N4U5 519 aa18.89■□□□□ 0.61
APOBEC3B-202ENST00000335760 GLI3P10071 1580 aa18.89■□□□□ 0.61
APOBEC3B-202ENST00000335760 U2SURPO15042 1029 aaKnown RBP18.87■□□□□ 0.61
APOBEC3B-202ENST00000335760 RXRBP28702 533 aa18.87■□□□□ 0.61
APOBEC3B-202ENST00000335760 RBM6P78332 1123 aaKnown RBP18.87■□□□□ 0.61
APOBEC3B-202ENST00000335760 NUDCQ9Y266 331 aa18.87■□□□□ 0.61
APOBEC3B-202ENST00000335760 THRAP3Q9Y2W1 955 aaKnown RBP18.87■□□□□ 0.61
APOBEC3B-202ENST00000335760 FAM98CQ17RN3 349 aaKnown RBP18.86■□□□□ 0.61
APOBEC3B-202ENST00000335760 CCDC184Q52MB2 194 aa18.86■□□□□ 0.61
APOBEC3B-202ENST00000335760 RGPD1P0DJD0 1748 aa18.85■□□□□ 0.61
APOBEC3B-202ENST00000335760 IGSF1Q8N6C5 1336 aa18.85■□□□□ 0.61
APOBEC3B-202ENST00000335760 SULT6B1Q6IMI4 303 aa18.84■□□□□ 0.61
APOBEC3B-202ENST00000335760 BARGINQ6ZT62 677 aa18.84■□□□□ 0.61
APOBEC3B-202ENST00000335760 MIER1Q8N108 512 aa18.84■□□□□ 0.61
APOBEC3B-202ENST00000335760 NCAPD2Q15021 1401 aa18.83■□□□□ 0.61
APOBEC3B-202ENST00000335760 MRS2Q9HD23 443 aa18.83■□□□□ 0.61
APOBEC3B-202ENST00000335760 WNK3Q9BYP7 1800 aa18.83■□□□□ 0.6
APOBEC3B-202ENST00000335760 HMOX1P09601 288 aa18.82■□□□□ 0.6
APOBEC3B-202ENST00000335760 U2AF1L5P0DN76 240 aaPredicted RBP18.82■□□□□ 0.6
APOBEC3B-202ENST00000335760 U2AF1Q01081 240 aaKnown RBP eCLIP18.82■□□□□ 0.6
APOBEC3B-202ENST00000335760 AEBP1Q8IUX7 1158 aa18.82■□□□□ 0.6
APOBEC3B-202ENST00000335760 A0A0G2JS52 829 aa18.81■□□□□ 0.6
APOBEC3B-202ENST00000335760 IL2RBP14784 551 aa18.81■□□□□ 0.6
APOBEC3B-202ENST00000335760 MYT1Q01538 1121 aa18.81■□□□□ 0.6
APOBEC3B-202ENST00000335760 ONECUT3O60422 494 aaPredicted RBP18.81■□□□□ 0.6
APOBEC3B-202ENST00000335760 RAPGEF4Q8WZA2 1011 aa18.81■□□□□ 0.6
APOBEC3B-202ENST00000335760 CDCA7Q9BWT1 371 aaPredicted RBP18.81■□□□□ 0.6
APOBEC3B-202ENST00000335760 DISP2A7MBM2 1401 aa18.8■□□□□ 0.6
APOBEC3B-202ENST00000335760 TATP17735 454 aaPredicted RBP18.8■□□□□ 0.6
APOBEC3B-202ENST00000335760 WDR43Q15061 677 aaKnown RBP eCLIP18.8■□□□□ 0.6
APOBEC3B-202ENST00000335760 SEPT12Q8IYM1 358 aa18.8■□□□□ 0.6
APOBEC3B-202ENST00000335760 KDRP35968 1356 aa18.79■□□□□ 0.6
APOBEC3B-202ENST00000335760 MEGF6O75095 1541 aa18.78■□□□□ 0.6
APOBEC3B-202ENST00000335760 THSD7AQ9UPZ6 1657 aa18.78■□□□□ 0.6
APOBEC3B-202ENST00000335760 PARP4Q9UKK3 1724 aaKnown RBP18.78■□□□□ 0.6
APOBEC3B-202ENST00000335760 CCER2I3L3R5 266 aa18.78■□□□□ 0.6
APOBEC3B-202ENST00000335760 RGS12O14924 1447 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms