RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 FLT4P35916 1363 aa25.19■■□□□ 1.62
TSSC4-201ENST00000333256 MEX3CQ5U5Q3 659 aaKnown RBP25.19■■□□□ 1.62
TSSC4-201ENST00000333256 IP6K1Q92551 441 aa25.19■■□□□ 1.62
TSSC4-201ENST00000333256 C8orf37Q96NL8 207 aa25.19■■□□□ 1.62
TSSC4-201ENST00000333256 LTV1Q96GA3 475 aaPredicted RBP25.17■■□□□ 1.62
TSSC4-201ENST00000333256 RTL1A6NKG5 1358 aa25.16■■□□□ 1.62
TSSC4-201ENST00000333256 CDK12Q9NYV4 1490 aaPredicted RBP25.16■■□□□ 1.62
TSSC4-201ENST00000333256 NGLY1Q96IV0 654 aa25.15■■□□□ 1.62
TSSC4-201ENST00000333256 BTG4Q9NY30 223 aa25.15■■□□□ 1.62
TSSC4-201ENST00000333256 KIF24Q5T7B8 1368 aa25.14■■□□□ 1.62
TSSC4-201ENST00000333256 CAMTA1Q9Y6Y1 1673 aa25.14■■□□□ 1.62
TSSC4-201ENST00000333256 COL18A1P39060 1754 aa25.14■■□□□ 1.62
TSSC4-201ENST00000333256 CFAP53Q96M91 514 aa25.13■■□□□ 1.61
TSSC4-201ENST00000333256 INSRP06213 1382 aa25.13■■□□□ 1.61
TSSC4-201ENST00000333256 MRS2Q9HD23 443 aa25.12■■□□□ 1.61
TSSC4-201ENST00000333256 STRN4Q9NRL3 753 aa25.12■■□□□ 1.61
TSSC4-201ENST00000333256 LMO7Q8WWI1 1683 aa25.12■■□□□ 1.61
TSSC4-201ENST00000333256 COL14A1Q05707 1796 aaKnown RBP25.11■■□□□ 1.61
TSSC4-201ENST00000333256 EIF4A2Q14240 407 aaKnown RBP25.11■■□□□ 1.61
TSSC4-201ENST00000333256 ANKRD24Q8TF21 1146 aa25.11■■□□□ 1.61
TSSC4-201ENST00000333256 BLMP54132 1417 aaPredicted RBP25.11■■□□□ 1.61
TSSC4-201ENST00000333256 RGPD5Q99666 1765 aa25.1■■□□□ 1.61
TSSC4-201ENST00000333256 COL3A1P02461 1466 aaPredicted RBP25.1■■□□□ 1.61
TSSC4-201ENST00000333256 DIAPH1O60610 1272 aaKnown RBP25.09■■□□□ 1.61
TSSC4-201ENST00000333256 ERBB3P21860 1342 aa25.09■■□□□ 1.61
TSSC4-201ENST00000333256 PLCH1Q4KWH8 1693 aa25.08■■□□□ 1.61
TSSC4-201ENST00000333256 ABCC6O95255 1503 aa25.08■■□□□ 1.61
TSSC4-201ENST00000333256 COL5A2P05997 1499 aaPredicted RBP25.08■■□□□ 1.6
TSSC4-201ENST00000333256 CSB-PGBD3P0DP91 1061 aa25.07■■□□□ 1.6
TSSC4-201ENST00000333256 EVA1CP58658 441 aa25.07■■□□□ 1.6
TSSC4-201ENST00000333256 SLIT2O94813 1529 aa25.07■■□□□ 1.6
TSSC4-201ENST00000333256 IL13P35225 146 aa25.07■■□□□ 1.6
TSSC4-201ENST00000333256 AFF2P51816 1311 aa25.06■■□□□ 1.6
TSSC4-201ENST00000333256 CCER2I3L3R5 266 aa25.05■■□□□ 1.6
TSSC4-201ENST00000333256 U2SURPO15042 1029 aaKnown RBP25.05■■□□□ 1.6
TSSC4-201ENST00000333256 LARP1Q6PKG0 1096 aaKnown RBP25.05■■□□□ 1.6
TSSC4-201ENST00000333256 FNBP4Q8N3X1 1017 aaPredicted RBP25.05■■□□□ 1.6
TSSC4-201ENST00000333256 BCL9LQ86UU0 1499 aa25.04■■□□□ 1.6
TSSC4-201ENST00000333256 NLRP2Q9NX02 1062 aa25.04■■□□□ 1.6
TSSC4-201ENST00000333256 USP21Q9UK80 565 aa25.04■■□□□ 1.6
TSSC4-201ENST00000333256 WDR17Q8IZU2 1322 aa25.03■■□□□ 1.6
TSSC4-201ENST00000333256 USHBP1Q8N6Y0 703 aa25.03■■□□□ 1.6
TSSC4-201ENST00000333256 NBPF6Q5VWK0 638 aa25.02■■□□□ 1.6
TSSC4-201ENST00000333256 TOM1L2Q6ZVM7 507 aa25.02■■□□□ 1.6
TSSC4-201ENST00000333256 UNC5CLQ8IV45 518 aa25.02■■□□□ 1.6
TSSC4-201ENST00000333256 NBPF4Q96M43 638 aa25.02■■□□□ 1.6
TSSC4-201ENST00000333256 EYA1Q99502 592 aa25.02■■□□□ 1.6
TSSC4-201ENST00000333256 USP35Q9P2H5 1018 aa25.01■■□□□ 1.59
TSSC4-201ENST00000333256 NUDCQ9Y266 331 aa25.01■■□□□ 1.59
TSSC4-201ENST00000333256 NRAPQ86VF7 1730 aa24.99■■□□□ 1.59
TSSC4-201ENST00000333256 NWD2Q9ULI1 1742 aa24.99■■□□□ 1.59
TSSC4-201ENST00000333256 U2AF1L5P0DN76 240 aaPredicted RBP24.99■■□□□ 1.59
TSSC4-201ENST00000333256 U2AF1Q01081 240 aaKnown RBP eCLIP24.99■■□□□ 1.59
TSSC4-201ENST00000333256 HMOX1P09601 288 aa24.98■■□□□ 1.59
TSSC4-201ENST00000333256 WDR43Q15061 677 aaKnown RBP eCLIP24.98■■□□□ 1.59
TSSC4-201ENST00000333256 CCDC9Q9Y3X0 531 aaKnown RBP24.98■■□□□ 1.59
TSSC4-201ENST00000333256 AEBP1Q8IUX7 1158 aa24.97■■□□□ 1.59
TSSC4-201ENST00000333256 PNISRQ8TF01 805 aaKnown RBP24.97■■□□□ 1.59
TSSC4-201ENST00000333256 RGPD2P0DJD1 1756 aa24.97■■□□□ 1.59
TSSC4-201ENST00000333256 FAM9BQ8IZU0 186 aa24.97■■□□□ 1.59
TSSC4-201ENST00000333256 IGSF1Q8N6C5 1336 aa24.96■■□□□ 1.59
TSSC4-201ENST00000333256 CRB1P82279 1406 aa24.96■■□□□ 1.59
TSSC4-201ENST00000333256 SULT6B1Q6IMI4 303 aa24.96■■□□□ 1.59
TSSC4-201ENST00000333256 ADAMTS8Q9UP79 889 aa24.94■■□□□ 1.58
TSSC4-201ENST00000333256 RGPD1P0DJD0 1748 aa24.93■■□□□ 1.58
TSSC4-201ENST00000333256 VPS72Q15906 364 aa24.93■■□□□ 1.58
TSSC4-201ENST00000333256 CARD10Q9BWT7 1032 aa24.93■■□□□ 1.58
TSSC4-201ENST00000333256 SPATA31A1Q5TZJ5 1347 aa24.91■■□□□ 1.58
TSSC4-201ENST00000333256 SPATA31A5Q5VU36 1347 aa24.91■■□□□ 1.58
TSSC4-201ENST00000333256 SPATA31A7Q8IWB4 1347 aa24.91■■□□□ 1.58
TSSC4-201ENST00000333256 PHF23Q9BUL5 403 aaPredicted RBP24.91■■□□□ 1.58
TSSC4-201ENST00000333256 QTRT2Q9H974 415 aaKnown RBP24.91■■□□□ 1.58
TSSC4-201ENST00000333256 FAM208AQ9UK61 1670 aaKnown RBP24.9■■□□□ 1.58
TSSC4-201ENST00000333256 RGS17Q9UGC6 210 aaPredicted RBP24.89■■□□□ 1.58
TSSC4-201ENST00000333256 TRPC5Q9UL62 973 aaPredicted RBP24.89■■□□□ 1.58
TSSC4-201ENST00000333256 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.89■■□□□ 1.58
TSSC4-201ENST00000333256 ZNF772Q68DY9 489 aaPredicted RBP24.88■■□□□ 1.57
TSSC4-201ENST00000333256 RSPH6AQ9H0K4 717 aa24.88■■□□□ 1.57
TSSC4-201ENST00000333256 ATRNO75882 1429 aa24.88■■□□□ 1.57
TSSC4-201ENST00000333256 NCAPD2Q15021 1401 aa24.88■■□□□ 1.57
TSSC4-201ENST00000333256 PRKAR2BP31323 418 aa24.88■■□□□ 1.57
TSSC4-201ENST00000333256 CCDC146Q8IYE0 955 aa24.88■■□□□ 1.57
TSSC4-201ENST00000333256 TCP11L2Q8N4U5 519 aa24.88■■□□□ 1.57
TSSC4-201ENST00000333256 KDRP35968 1356 aa24.87■■□□□ 1.57
TSSC4-201ENST00000333256 GJD4Q96KN9 370 aaPredicted RBP24.86■■□□□ 1.57
TSSC4-201ENST00000333256 FCHSD2O94868 740 aa24.85■■□□□ 1.57
TSSC4-201ENST00000333256 SENP3-EIF4A1A0A087X0R7 540 aa24.85■■□□□ 1.57
TSSC4-201ENST00000333256 MEGF6O75095 1541 aa24.85■■□□□ 1.57
TSSC4-201ENST00000333256 FAM98CQ17RN3 349 aaKnown RBP24.85■■□□□ 1.57
TSSC4-201ENST00000333256 RAPGEF4Q8WZA2 1011 aa24.85■■□□□ 1.57
TSSC4-201ENST00000333256 IL2RBP14784 551 aa24.82■■□□□ 1.56
TSSC4-201ENST00000333256 PHACTR3Q96KR7 559 aa24.82■■□□□ 1.56
TSSC4-201ENST00000333256 GLI3P10071 1580 aa24.82■■□□□ 1.56
TSSC4-201ENST00000333256 PLEKHF1Q96S99 279 aa24.81■■□□□ 1.56
TSSC4-201ENST00000333256 THRAP3Q9Y2W1 955 aaKnown RBP24.81■■□□□ 1.56
TSSC4-201ENST00000333256 TATP17735 454 aaPredicted RBP24.81■■□□□ 1.56
TSSC4-201ENST00000333256 POTEAQ6S8J7 498 aa24.81■■□□□ 1.56
TSSC4-201ENST00000333256 A0A0G2JS52 829 aa24.79■■□□□ 1.56
TSSC4-201ENST00000333256 MYT1Q01538 1121 aa24.79■■□□□ 1.56
TSSC4-201ENST00000333256 BARGINQ6ZT62 677 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms