RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 CCDC192P0DO97 292 aa19.31■□□□□ 0.68
PTCH1-201ENST00000331920 IFFO1Q0D2I5 559 aa19.31■□□□□ 0.68
PTCH1-201ENST00000331920 CDC45O75419 566 aa19.31■□□□□ 0.68
PTCH1-201ENST00000331920 PRDM10Q9NQV6 1147 aa19.31■□□□□ 0.68
PTCH1-201ENST00000331920 POTEJP0CG39 1038 aa19.31■□□□□ 0.68
PTCH1-201ENST00000331920 RBM42Q9BTD8 480 aaKnown RBP19.31■□□□□ 0.68
PTCH1-201ENST00000331920 SHTN1A0MZ66 631 aa19.31■□□□□ 0.68
PTCH1-201ENST00000331920 TMX1Q9H3N1 280 aa19.31■□□□□ 0.68
PTCH1-201ENST00000331920 EPB41L2O43491 1005 aaKnown RBP19.3■□□□□ 0.68
PTCH1-201ENST00000331920 CRACR2AQ9BSW2 395 aa19.3■□□□□ 0.68
PTCH1-201ENST00000331920 WDR78Q5VTH9 848 aa19.3■□□□□ 0.68
PTCH1-201ENST00000331920 TRIM22Q8IYM9 498 aa19.3■□□□□ 0.68
PTCH1-201ENST00000331920 CCDC148Q8NFR7 591 aa19.3■□□□□ 0.68
PTCH1-201ENST00000331920 BRPF3Q9ULD4 1205 aa19.3■□□□□ 0.68
PTCH1-201ENST00000331920 JMYQ8N9B5 988 aa19.3■□□□□ 0.68
PTCH1-201ENST00000331920 PANK1Q8TE04 598 aa19.29■□□□□ 0.68
PTCH1-201ENST00000331920 CFAP57Q96MR6 1250 aa19.29■□□□□ 0.68
PTCH1-201ENST00000331920 TRERF1Q96PN7 1200 aa19.29■□□□□ 0.68
PTCH1-201ENST00000331920 BMS1Q14692 1282 aaKnown RBP19.29■□□□□ 0.68
PTCH1-201ENST00000331920 SIL1Q9H173 461 aa19.29■□□□□ 0.68
PTCH1-201ENST00000331920 ZNF397Q8NF99 534 aaPredicted RBP19.29■□□□□ 0.68
PTCH1-201ENST00000331920 ZFP91Q96JP5 570 aaPredicted RBP19.29■□□□□ 0.68
PTCH1-201ENST00000331920 SRRTQ9BXP5 876 aaKnown RBP19.28■□□□□ 0.68
PTCH1-201ENST00000331920 PDCP20941 246 aa19.28■□□□□ 0.68
PTCH1-201ENST00000331920 SURF6O75683 361 aaKnown RBP19.28■□□□□ 0.68
PTCH1-201ENST00000331920 BMP2KQ9NSY1 1161 aaPredicted RBP19.28■□□□□ 0.68
PTCH1-201ENST00000331920 NLRP2Q9NX02 1062 aa19.28■□□□□ 0.68
PTCH1-201ENST00000331920 WASHC2AQ641Q2 1341 aa19.28■□□□□ 0.68
PTCH1-201ENST00000331920 DRC1Q96MC2 740 aa19.28■□□□□ 0.68
PTCH1-201ENST00000331920 CBFA2T2O43439 604 aa19.27■□□□□ 0.68
PTCH1-201ENST00000331920 APBB1IPQ7Z5R6 666 aaPredicted RBP19.27■□□□□ 0.68
PTCH1-201ENST00000331920 CEP57L1Q8IYX8 460 aa19.27■□□□□ 0.68
PTCH1-201ENST00000331920 MRPS9P82933 396 aaKnown RBP19.27■□□□□ 0.68
PTCH1-201ENST00000331920 CA8P35219 290 aa19.27■□□□□ 0.68
PTCH1-201ENST00000331920 CCDC158Q5M9N0 1113 aa19.27■□□□□ 0.68
PTCH1-201ENST00000331920 C1orf115Q9H7X2 142 aa19.27■□□□□ 0.68
PTCH1-201ENST00000331920 GNL3LQ9NVN8 582 aaKnown RBP19.26■□□□□ 0.67
PTCH1-201ENST00000331920 RAI14Q9P0K7 980 aa19.26■□□□□ 0.67
PTCH1-201ENST00000331920 ST20-MTHFSA0A0A6YYL1 179 aa19.26■□□□□ 0.67
PTCH1-201ENST00000331920 HOOK3Q86VS8 718 aa19.26■□□□□ 0.67
PTCH1-201ENST00000331920 CETN2P41208 172 aa19.26■□□□□ 0.67
PTCH1-201ENST00000331920 TIGD1Q96MW7 591 aa19.26■□□□□ 0.67
PTCH1-201ENST00000331920 ANKRD30AQ9BXX3 1397 aa19.25■□□□□ 0.67
PTCH1-201ENST00000331920 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.25■□□□□ 0.67
PTCH1-201ENST00000331920 UBA5Q9GZZ9 404 aa19.25■□□□□ 0.67
PTCH1-201ENST00000331920 MBD3O95983 291 aa19.25■□□□□ 0.67
PTCH1-201ENST00000331920 FILIP1Q7Z7B0 1213 aa19.25■□□□□ 0.67
PTCH1-201ENST00000331920 CTNNA2P26232 953 aa19.25■□□□□ 0.67
PTCH1-201ENST00000331920 ARL1P40616 181 aaPredicted RBP19.25■□□□□ 0.67
PTCH1-201ENST00000331920 DHX8Q14562 1220 aaKnown RBP19.25■□□□□ 0.67
PTCH1-201ENST00000331920 LARP1Q6PKG0 1096 aaKnown RBP19.25■□□□□ 0.67
PTCH1-201ENST00000331920 ARHGAP29Q52LW3 1261 aa19.24■□□□□ 0.67
PTCH1-201ENST00000331920 CASQ1P31415 396 aa19.24■□□□□ 0.67
PTCH1-201ENST00000331920 FKBP4Q02790 459 aaKnown RBP eCLIP19.24■□□□□ 0.67
PTCH1-201ENST00000331920 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.24■□□□□ 0.67
PTCH1-201ENST00000331920 ANKRD18BA2A2Z9 1011 aa19.24■□□□□ 0.67
PTCH1-201ENST00000331920 SF3B2Q13435 895 aaKnown RBP19.24■□□□□ 0.67
PTCH1-201ENST00000331920 L3MBTL2Q969R5 705 aa19.24■□□□□ 0.67
PTCH1-201ENST00000331920 RAB3GAP2Q9H2M9 1393 aa19.24■□□□□ 0.67
PTCH1-201ENST00000331920 PABPN1LA6NDY0 278 aaKnown RBP19.23■□□□□ 0.67
PTCH1-201ENST00000331920 CCDC160A6NGH7 325 aa19.23■□□□□ 0.67
PTCH1-201ENST00000331920 FERP16591 822 aa19.23■□□□□ 0.67
PTCH1-201ENST00000331920 ATF3P18847 181 aa19.23■□□□□ 0.67
PTCH1-201ENST00000331920 LIG1P18858 919 aa19.23■□□□□ 0.67
PTCH1-201ENST00000331920 NOL7Q9UMY1 257 aaKnown RBP19.23■□□□□ 0.67
PTCH1-201ENST00000331920 POLR3GO15318 223 aaPredicted RBP19.23■□□□□ 0.67
PTCH1-201ENST00000331920 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.67
PTCH1-201ENST00000331920 GCOM1H8Y6P7 765 aaPredicted RBP19.22■□□□□ 0.67
PTCH1-201ENST00000331920 MYZAPP0CAP1 466 aa19.22■□□□□ 0.67
PTCH1-201ENST00000331920 LUZP1Q86V48 1076 aa19.22■□□□□ 0.67
PTCH1-201ENST00000331920 CCDC57Q2TAC2 916 aa19.22■□□□□ 0.67
PTCH1-201ENST00000331920 PAXIP1Q6ZW49 1069 aaPredicted RBP19.22■□□□□ 0.67
PTCH1-201ENST00000331920 DNAI2Q9GZS0 605 aa19.22■□□□□ 0.67
PTCH1-201ENST00000331920 CBX1P83916 185 aa19.22■□□□□ 0.67
PTCH1-201ENST00000331920 STRN4Q9NRL3 753 aa19.22■□□□□ 0.67
PTCH1-201ENST00000331920 FEZ1Q99689 392 aa19.21■□□□□ 0.67
PTCH1-201ENST00000331920 HIP1O00291 1037 aa19.21■□□□□ 0.67
PTCH1-201ENST00000331920 SPA17Q15506 151 aa19.2■□□□□ 0.66
PTCH1-201ENST00000331920 CFAP100Q494V2 611 aa19.2■□□□□ 0.66
PTCH1-201ENST00000331920 DDX11Q96FC9 970 aa19.2■□□□□ 0.66
PTCH1-201ENST00000331920 EFCAB2Q5VUJ9 269 aa19.2■□□□□ 0.66
PTCH1-201ENST00000331920 PPP1R12BO60237 982 aaPredicted RBP19.2■□□□□ 0.66
PTCH1-201ENST00000331920 NACAP1Q9BZK3 213 aa19.2■□□□□ 0.66
PTCH1-201ENST00000331920 CAMK4Q16566 473 aa19.2■□□□□ 0.66
PTCH1-201ENST00000331920 FERMT2Q96AC1 680 aa19.2■□□□□ 0.66
PTCH1-201ENST00000331920 TDO2P48775 406 aa19.2■□□□□ 0.66
PTCH1-201ENST00000331920 CCDC175P0C221 793 aa19.19■□□□□ 0.66
PTCH1-201ENST00000331920 KLHL10Q6JEL2 608 aa19.19■□□□□ 0.66
PTCH1-201ENST00000331920 CYP46A1Q9Y6A2 500 aa19.19■□□□□ 0.66
PTCH1-201ENST00000331920 TRMT1LQ7Z2T5 733 aaKnown RBP19.19■□□□□ 0.66
PTCH1-201ENST00000331920 CCDC150Q8NCX0 1101 aa19.19■□□□□ 0.66
PTCH1-201ENST00000331920 UPF3BQ9BZI7 483 aaKnown RBP19.19■□□□□ 0.66
PTCH1-201ENST00000331920 PPP4R3AQ6IN85 833 aa19.18■□□□□ 0.66
PTCH1-201ENST00000331920 LARP1BQ659C4 914 aaKnown RBP19.18■□□□□ 0.66
PTCH1-201ENST00000331920 CACNA2D4Q7Z3S7 1137 aa19.18■□□□□ 0.66
PTCH1-201ENST00000331920 UBXN4Q92575 508 aa19.18■□□□□ 0.66
PTCH1-201ENST00000331920 SPECC1Q5M775 1068 aa19.18■□□□□ 0.66
PTCH1-201ENST00000331920 IL27Q8NEV9 243 aa19.18■□□□□ 0.66
PTCH1-201ENST00000331920 SPATA32Q96LK8 384 aa19.18■□□□□ 0.66
PTCH1-201ENST00000331920 SSX2IPQ9Y2D8 614 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms