RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 RGPD5Q99666 1765 aa23.18■■□□□ 1.3
CLDN6-201ENST00000328796 COL5A2P05997 1499 aaPredicted RBP23.17■■□□□ 1.3
CLDN6-201ENST00000328796 AXIN2Q9Y2T1 843 aa23.16■■□□□ 1.3
CLDN6-201ENST00000328796 SPATA31A5Q5VU36 1347 aa23.15■■□□□ 1.3
CLDN6-201ENST00000328796 SPATA31A7Q8IWB4 1347 aa23.15■■□□□ 1.3
CLDN6-201ENST00000328796 STRN4Q9NRL3 753 aa23.14■■□□□ 1.3
CLDN6-201ENST00000328796 RGS12O14924 1447 aa23.14■■□□□ 1.29
CLDN6-201ENST00000328796 NSD2O96028 1365 aa23.14■■□□□ 1.29
CLDN6-201ENST00000328796 PER1O15534 1290 aaPredicted RBP23.14■■□□□ 1.29
CLDN6-201ENST00000328796 KNSTRNQ9Y448 316 aa23.14■■□□□ 1.29
CLDN6-201ENST00000328796 EVA1CP58658 441 aa23.13■■□□□ 1.29
CLDN6-201ENST00000328796 CCDC9Q9Y3X0 531 aaKnown RBP23.13■■□□□ 1.29
CLDN6-201ENST00000328796 MAP3K19Q56UN5 1328 aa23.12■■□□□ 1.29
CLDN6-201ENST00000328796 FBLN1P23142 703 aa23.12■■□□□ 1.29
CLDN6-201ENST00000328796 SPATA31A1Q5TZJ5 1347 aa23.11■■□□□ 1.29
CLDN6-201ENST00000328796 LARP1Q6PKG0 1096 aaKnown RBP23.11■■□□□ 1.29
CLDN6-201ENST00000328796 ONECUT3O60422 494 aaPredicted RBP23.1■■□□□ 1.29
CLDN6-201ENST00000328796 AMER1Q5JTC6 1135 aaPredicted RBP23.1■■□□□ 1.29
CLDN6-201ENST00000328796 IP6K1Q92551 441 aa23.1■■□□□ 1.29
CLDN6-201ENST00000328796 WDR17Q8IZU2 1322 aa23.08■■□□□ 1.29
CLDN6-201ENST00000328796 BLMP54132 1417 aaPredicted RBP23.08■■□□□ 1.29
CLDN6-201ENST00000328796 CRB1P82279 1406 aa23.08■■□□□ 1.29
CLDN6-201ENST00000328796 RRS1Q15050 365 aaKnown RBP23.08■■□□□ 1.29
CLDN6-201ENST00000328796 RTL1A6NKG5 1358 aa23.08■■□□□ 1.28
CLDN6-201ENST00000328796 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.28
CLDN6-201ENST00000328796 HOXC9P31274 260 aa23.06■■□□□ 1.28
CLDN6-201ENST00000328796 KIF24Q5T7B8 1368 aa23.06■■□□□ 1.28
CLDN6-201ENST00000328796 ERBB3P21860 1342 aa23.06■■□□□ 1.28
CLDN6-201ENST00000328796 PEAK1Q9H792 1746 aa23.06■■□□□ 1.28
CLDN6-201ENST00000328796 THSD7AQ9UPZ6 1657 aa23.05■■□□□ 1.28
CLDN6-201ENST00000328796 NPC1L1Q9UHC9 1359 aa23.04■■□□□ 1.28
CLDN6-201ENST00000328796 AMPHP49418 695 aa23.04■■□□□ 1.28
CLDN6-201ENST00000328796 FAM98CQ17RN3 349 aaKnown RBP23.04■■□□□ 1.28
CLDN6-201ENST00000328796 BRWD3Q6RI45 1802 aa23.04■■□□□ 1.28
CLDN6-201ENST00000328796 BARGINQ6ZT62 677 aa23.03■■□□□ 1.28
CLDN6-201ENST00000328796 TOM1L2Q6ZVM7 507 aa23.02■■□□□ 1.28
CLDN6-201ENST00000328796 SEPT12Q8IYM1 358 aa23.02■■□□□ 1.28
CLDN6-201ENST00000328796 TCP11L2Q8N4U5 519 aa23.02■■□□□ 1.28
CLDN6-201ENST00000328796 ANKRD24Q8TF21 1146 aa23.02■■□□□ 1.28
CLDN6-201ENST00000328796 THRAP3Q9Y2W1 955 aaKnown RBP23.02■■□□□ 1.28
CLDN6-201ENST00000328796 EMILIN1Q9Y6C2 1016 aa23.02■■□□□ 1.28
CLDN6-201ENST00000328796 FLT4P35916 1363 aa23.02■■□□□ 1.28
CLDN6-201ENST00000328796 FAM208AQ9UK61 1670 aaKnown RBP23.02■■□□□ 1.28
CLDN6-201ENST00000328796 CSB-PGBD3P0DP91 1061 aa23.01■■□□□ 1.27
CLDN6-201ENST00000328796 MORC1Q86VD1 984 aa23.01■■□□□ 1.27
CLDN6-201ENST00000328796 CARD10Q9BWT7 1032 aa23.01■■□□□ 1.27
CLDN6-201ENST00000328796 USP35Q9P2H5 1018 aa23.01■■□□□ 1.27
CLDN6-201ENST00000328796 POLKQ9UBT6 870 aa23■■□□□ 1.27
CLDN6-201ENST00000328796 INSRP06213 1382 aa22.99■■□□□ 1.27
CLDN6-201ENST00000328796 WNK3Q9BYP7 1800 aa22.99■■□□□ 1.27
CLDN6-201ENST00000328796 TNNT2P45379 298 aaPredicted RBP22.99■■□□□ 1.27
CLDN6-201ENST00000328796 SMG6Q86US8 1419 aaKnown RBP22.98■■□□□ 1.27
CLDN6-201ENST00000328796 HSP90AB2PQ58FF8 381 aa22.97■■□□□ 1.27
CLDN6-201ENST00000328796 CC2D1BQ5T0F9 858 aaKnown RBP22.97■■□□□ 1.27
CLDN6-201ENST00000328796 PARP4Q9UKK3 1724 aaKnown RBP22.96■■□□□ 1.27
CLDN6-201ENST00000328796 RGPD2P0DJD1 1756 aa22.96■■□□□ 1.27
CLDN6-201ENST00000328796 LTV1Q96GA3 475 aaPredicted RBP22.96■■□□□ 1.27
CLDN6-201ENST00000328796 NLRP2Q9NX02 1062 aa22.96■■□□□ 1.27
CLDN6-201ENST00000328796 A0A0G2JS52 829 aa22.95■■□□□ 1.26
CLDN6-201ENST00000328796 MYT1Q01538 1121 aa22.95■■□□□ 1.26
CLDN6-201ENST00000328796 DISP2A7MBM2 1401 aa22.94■■□□□ 1.26
CLDN6-201ENST00000328796 PPM1GO15355 546 aaPredicted RBP22.93■■□□□ 1.26
CLDN6-201ENST00000328796 KRT27Q7Z3Y8 459 aa22.92■■□□□ 1.26
CLDN6-201ENST00000328796 CDCA7Q9BWT1 371 aaPredicted RBP22.92■■□□□ 1.26
CLDN6-201ENST00000328796 LRRC37A3O60309 1634 aa22.9■■□□□ 1.26
CLDN6-201ENST00000328796 DDX10Q13206 875 aaKnown RBP22.89■■□□□ 1.26
CLDN6-201ENST00000328796 NBPF6Q5VWK0 638 aa22.89■■□□□ 1.25
CLDN6-201ENST00000328796 NBPF4Q96M43 638 aa22.89■■□□□ 1.25
CLDN6-201ENST00000328796 EP400Q96L91 3159 aa22.87■■□□□ 1.25
CLDN6-201ENST00000328796 IL2RBP14784 551 aa22.86■■□□□ 1.25
CLDN6-201ENST00000328796 CNGB1Q14028 1251 aaPredicted RBP22.86■■□□□ 1.25
CLDN6-201ENST00000328796 NCAPD2Q15021 1401 aa22.86■■□□□ 1.25
CLDN6-201ENST00000328796 EIF4A2Q14240 407 aaKnown RBP22.85■■□□□ 1.25
CLDN6-201ENST00000328796 DDB1Q16531 1140 aa22.85■■□□□ 1.25
CLDN6-201ENST00000328796 UPF1Q92900 1129 aaKnown RBP eCLIP22.85■■□□□ 1.25
CLDN6-201ENST00000328796 ZNF316A6NFI3 1004 aaPredicted RBP22.84■■□□□ 1.25
CLDN6-201ENST00000328796 MTHFSP49914 203 aa22.84■■□□□ 1.25
CLDN6-201ENST00000328796 PDE3BQ13370 1112 aa22.84■■□□□ 1.25
CLDN6-201ENST00000328796 TNS2Q63HR2 1409 aa22.83■■□□□ 1.25
CLDN6-201ENST00000328796 USHBP1Q8N6Y0 703 aa22.82■■□□□ 1.24
CLDN6-201ENST00000328796 EYA1Q99502 592 aa22.82■■□□□ 1.24
CLDN6-201ENST00000328796 EXOC5O00471 708 aa22.81■■□□□ 1.24
CLDN6-201ENST00000328796 FAM182BQ5T319 152 aa22.81■■□□□ 1.24
CLDN6-201ENST00000328796 MEGF6O75095 1541 aa22.81■■□□□ 1.24
CLDN6-201ENST00000328796 PARD3Q8TEW0 1356 aa22.8■■□□□ 1.24
CLDN6-201ENST00000328796 FAM196AQ6ZSG2 479 aa22.78■■□□□ 1.24
CLDN6-201ENST00000328796 OVOS2A0A0G2JMS6 1433 aa22.78■■□□□ 1.24
CLDN6-201ENST00000328796 RGPD1P0DJD0 1748 aa22.78■■□□□ 1.24
CLDN6-201ENST00000328796 IGSF1Q8N6C5 1336 aa22.78■■□□□ 1.24
CLDN6-201ENST00000328796 PPP2R1AP30153 589 aa22.77■■□□□ 1.24
CLDN6-201ENST00000328796 IL13P35225 146 aa22.77■■□□□ 1.24
CLDN6-201ENST00000328796 MARCH10Q8NA82 808 aaPredicted RBP22.77■■□□□ 1.24
CLDN6-201ENST00000328796 RAPGEF4Q8WZA2 1011 aa22.76■■□□□ 1.23
CLDN6-201ENST00000328796 COL3A1P02461 1466 aaPredicted RBP22.76■■□□□ 1.23
CLDN6-201ENST00000328796 SHANK3Q9BYB0 1731 aa22.76■■□□□ 1.23
CLDN6-201ENST00000328796 BCL9O00512 1426 aa22.76■■□□□ 1.23
CLDN6-201ENST00000328796 CCDC125Q86Z20 511 aa22.76■■□□□ 1.23
CLDN6-201ENST00000328796 TATP17735 454 aaPredicted RBP22.75■■□□□ 1.23
CLDN6-201ENST00000328796 SBF2Q86WG5 1849 aa22.74■■□□□ 1.23
CLDN6-201ENST00000328796 PKD1L3Q7Z443 1732 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms