RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 MIER1Q8N108 512 aa28.41■■■□□ 2.14
YBX1-201ENST00000321358 HSP90AB2PQ58FF8 381 aa28.4■■■□□ 2.14
YBX1-201ENST00000321358 SMG6Q86US8 1419 aaKnown RBP28.4■■■□□ 2.14
YBX1-201ENST00000321358 EVA1CP58658 441 aa28.38■■■□□ 2.13
YBX1-201ENST00000321358 RGS17Q9UGC6 210 aaPredicted RBP28.38■■■□□ 2.13
YBX1-201ENST00000321358 ABCA3Q99758 1704 aa28.38■■■□□ 2.13
YBX1-201ENST00000321358 BTG4Q9NY30 223 aa28.38■■■□□ 2.13
YBX1-201ENST00000321358 AXIN2Q9Y2T1 843 aa28.38■■■□□ 2.13
YBX1-201ENST00000321358 INSRP06213 1382 aa28.37■■■□□ 2.13
YBX1-201ENST00000321358 BLMP54132 1417 aaPredicted RBP28.37■■■□□ 2.13
YBX1-201ENST00000321358 CDK12Q9NYV4 1490 aaPredicted RBP28.37■■■□□ 2.13
YBX1-201ENST00000321358 LTV1Q96GA3 475 aaPredicted RBP28.36■■■□□ 2.13
YBX1-201ENST00000321358 LRP6O75581 1613 aa28.36■■■□□ 2.13
YBX1-201ENST00000321358 DIAPH1O60610 1272 aaKnown RBP28.35■■■□□ 2.13
YBX1-201ENST00000321358 CSB-PGBD3P0DP91 1061 aa28.35■■■□□ 2.13
YBX1-201ENST00000321358 MRS2Q9HD23 443 aa28.35■■■□□ 2.13
YBX1-201ENST00000321358 NUDCQ9Y266 331 aa28.35■■■□□ 2.13
YBX1-201ENST00000321358 CCER2I3L3R5 266 aa28.34■■■□□ 2.13
YBX1-201ENST00000321358 ANKRD24Q8TF21 1146 aa28.34■■■□□ 2.13
YBX1-201ENST00000321358 ABCC6O95255 1503 aa28.34■■■□□ 2.13
YBX1-201ENST00000321358 MAP2P11137 1827 aaKnown RBP28.33■■■□□ 2.13
YBX1-201ENST00000321358 STRN4Q9NRL3 753 aa28.33■■■□□ 2.13
YBX1-201ENST00000321358 SOCS7O14512 581 aa28.32■■■□□ 2.12
YBX1-201ENST00000321358 EIF4A2Q14240 407 aaKnown RBP28.31■■■□□ 2.12
YBX1-201ENST00000321358 FNBP4Q8N3X1 1017 aaPredicted RBP28.31■■■□□ 2.12
YBX1-201ENST00000321358 LTN1O94822 1766 aa28.3■■■□□ 2.12
YBX1-201ENST00000321358 COL14A1Q05707 1796 aaKnown RBP28.3■■■□□ 2.12
YBX1-201ENST00000321358 ERBB3P21860 1342 aa28.29■■■□□ 2.12
YBX1-201ENST00000321358 USP21Q9UK80 565 aa28.28■■■□□ 2.12
YBX1-201ENST00000321358 IL13P35225 146 aa28.28■■■□□ 2.12
YBX1-201ENST00000321358 UNC5CLQ8IV45 518 aa28.28■■■□□ 2.12
YBX1-201ENST00000321358 CAMTA1Q9Y6Y1 1673 aa28.27■■■□□ 2.12
YBX1-201ENST00000321358 U2SURPO15042 1029 aaKnown RBP28.27■■■□□ 2.12
YBX1-201ENST00000321358 TOM1L2Q6ZVM7 507 aa28.27■■■□□ 2.12
YBX1-201ENST00000321358 NLRP2Q9NX02 1062 aa28.27■■■□□ 2.12
YBX1-201ENST00000321358 PEAK1Q9H792 1746 aa28.27■■■□□ 2.12
YBX1-201ENST00000321358 AFF2P51816 1311 aa28.26■■■□□ 2.11
YBX1-201ENST00000321358 WDR17Q8IZU2 1322 aa28.26■■■□□ 2.11
YBX1-201ENST00000321358 WDR43Q15061 677 aaKnown RBP eCLIP28.26■■■□□ 2.11
YBX1-201ENST00000321358 SLIT2O94813 1529 aa28.25■■■□□ 2.11
YBX1-201ENST00000321358 COL5A2P05997 1499 aaPredicted RBP28.24■■■□□ 2.11
YBX1-201ENST00000321358 CCDC184Q52MB2 194 aa28.24■■■□□ 2.11
YBX1-201ENST00000321358 POTEAQ6S8J7 498 aa28.23■■■□□ 2.11
YBX1-201ENST00000321358 LARP1Q6PKG0 1096 aaKnown RBP28.23■■■□□ 2.11
YBX1-201ENST00000321358 CCDC9Q9Y3X0 531 aaKnown RBP28.23■■■□□ 2.11
YBX1-201ENST00000321358 COL18A1P39060 1754 aa28.22■■■□□ 2.11
YBX1-201ENST00000321358 LMO7Q8WWI1 1683 aa28.22■■■□□ 2.11
YBX1-201ENST00000321358 U2AF1L5P0DN76 240 aaPredicted RBP28.22■■■□□ 2.11
YBX1-201ENST00000321358 U2AF1Q01081 240 aaKnown RBP eCLIP28.22■■■□□ 2.11
YBX1-201ENST00000321358 EYA1Q99502 592 aa28.21■■■□□ 2.11
YBX1-201ENST00000321358 COL3A1P02461 1466 aaPredicted RBP28.21■■■□□ 2.11
YBX1-201ENST00000321358 ZNF772Q68DY9 489 aaPredicted RBP28.2■■■□□ 2.1
YBX1-201ENST00000321358 NBPF6Q5VWK0 638 aa28.19■■■□□ 2.1
YBX1-201ENST00000321358 NBPF4Q96M43 638 aa28.19■■■□□ 2.1
YBX1-201ENST00000321358 CARD10Q9BWT7 1032 aa28.19■■■□□ 2.1
YBX1-201ENST00000321358 BCL9LQ86UU0 1499 aa28.18■■■□□ 2.1
YBX1-201ENST00000321358 VPS72Q15906 364 aa28.18■■■□□ 2.1
YBX1-201ENST00000321358 USP35Q9P2H5 1018 aa28.18■■■□□ 2.1
YBX1-201ENST00000321358 TRPC5Q9UL62 973 aaPredicted RBP28.18■■■□□ 2.1
YBX1-201ENST00000321358 CRB1P82279 1406 aa28.17■■■□□ 2.1
YBX1-201ENST00000321358 PNISRQ8TF01 805 aaKnown RBP28.17■■■□□ 2.1
YBX1-201ENST00000321358 SULT6B1Q6IMI4 303 aa28.16■■■□□ 2.1
YBX1-201ENST00000321358 PNNQ9H307 717 aaKnown RBP28.16■■■□□ 2.1
YBX1-201ENST00000321358 IGSF1Q8N6C5 1336 aa28.16■■■□□ 2.1
YBX1-201ENST00000321358 PLCH1Q4KWH8 1693 aa28.15■■■□□ 2.1
YBX1-201ENST00000321358 USHBP1Q8N6Y0 703 aa28.14■■■□□ 2.1
YBX1-201ENST00000321358 QTRT2Q9H974 415 aaKnown RBP28.14■■■□□ 2.1
YBX1-201ENST00000321358 NWD2Q9ULI1 1742 aa28.14■■■□□ 2.1
YBX1-201ENST00000321358 HMOX1P09601 288 aa28.13■■■□□ 2.09
YBX1-201ENST00000321358 FAM9BQ8IZU0 186 aa28.13■■■□□ 2.09
YBX1-201ENST00000321358 TCP11L2Q8N4U5 519 aa28.13■■■□□ 2.09
YBX1-201ENST00000321358 SPATA31A5Q5VU36 1347 aa28.12■■■□□ 2.09
YBX1-201ENST00000321358 SPATA31A7Q8IWB4 1347 aa28.12■■■□□ 2.09
YBX1-201ENST00000321358 FCHSD2O94868 740 aa28.12■■■□□ 2.09
YBX1-201ENST00000321358 NEFMP07197 916 aa28.12■■■□□ 2.09
YBX1-201ENST00000321358 RAPGEF4Q8WZA2 1011 aa28.12■■■□□ 2.09
YBX1-201ENST00000321358 ADAMTS8Q9UP79 889 aa28.12■■■□□ 2.09
YBX1-201ENST00000321358 THRAP3Q9Y2W1 955 aaKnown RBP28.12■■■□□ 2.09
YBX1-201ENST00000321358 SPATA31A1Q5TZJ5 1347 aa28.11■■■□□ 2.09
YBX1-201ENST00000321358 RGPD5Q99666 1765 aa28.11■■■□□ 2.09
YBX1-201ENST00000321358 GJD4Q96KN9 370 aaPredicted RBP28.09■■■□□ 2.09
YBX1-201ENST00000321358 AEBP1Q8IUX7 1158 aa28.08■■■□□ 2.09
YBX1-201ENST00000321358 TATP17735 454 aaPredicted RBP28.07■■■□□ 2.08
YBX1-201ENST00000321358 FAM208AQ9UK61 1670 aaKnown RBP28.06■■■□□ 2.08
YBX1-201ENST00000321358 IL2RBP14784 551 aa28.06■■■□□ 2.08
YBX1-201ENST00000321358 CDCA7Q9BWT1 371 aaPredicted RBP28.06■■■□□ 2.08
YBX1-201ENST00000321358 KDRP35968 1356 aa28.06■■■□□ 2.08
YBX1-201ENST00000321358 NRAPQ86VF7 1730 aa28.06■■■□□ 2.08
YBX1-201ENST00000321358 ATRNO75882 1429 aa28.05■■■□□ 2.08
YBX1-201ENST00000321358 PRKAR2BP31323 418 aa28.05■■■□□ 2.08
YBX1-201ENST00000321358 RSPH6AQ9H0K4 717 aa28.05■■■□□ 2.08
YBX1-201ENST00000321358 BARGINQ6ZT62 677 aa28.04■■■□□ 2.08
YBX1-201ENST00000321358 MAPK8IP3Q9UPT6 1336 aa28.03■■■□□ 2.08
YBX1-201ENST00000321358 NCAPD2Q15021 1401 aa28.02■■■□□ 2.08
YBX1-201ENST00000321358 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.02■■■□□ 2.08
YBX1-201ENST00000321358 A0A0G2JS52 829 aa28.01■■■□□ 2.07
YBX1-201ENST00000321358 RBM6P78332 1123 aaKnown RBP28.01■■■□□ 2.07
YBX1-201ENST00000321358 MYT1Q01538 1121 aa28.01■■■□□ 2.07
YBX1-201ENST00000321358 FAM98CQ17RN3 349 aaKnown RBP28.01■■■□□ 2.07
YBX1-201ENST00000321358 PLEKHO1Q53GL0 409 aaPredicted RBP28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms