RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 IP6K1Q92551 441 aa30.17■■■□□ 2.42
CCDC85B-201ENST00000312579 FLT4P35916 1363 aa30.17■■■□□ 2.42
CCDC85B-201ENST00000312579 COL18A1P39060 1754 aa30.16■■■□□ 2.42
CCDC85B-201ENST00000312579 CDK12Q9NYV4 1490 aaPredicted RBP30.16■■■□□ 2.42
CCDC85B-201ENST00000312579 LTV1Q96GA3 475 aaPredicted RBP30.14■■■□□ 2.42
CCDC85B-201ENST00000312579 MRS2Q9HD23 443 aa30.14■■■□□ 2.42
CCDC85B-201ENST00000312579 RGPD5Q99666 1765 aa30.14■■■□□ 2.41
CCDC85B-201ENST00000312579 RTL1A6NKG5 1358 aa30.13■■■□□ 2.41
CCDC85B-201ENST00000312579 COL3A1P02461 1466 aaPredicted RBP30.12■■■□□ 2.41
CCDC85B-201ENST00000312579 KIF24Q5T7B8 1368 aa30.12■■■□□ 2.41
CCDC85B-201ENST00000312579 CFAP53Q96M91 514 aa30.12■■■□□ 2.41
CCDC85B-201ENST00000312579 C8orf37Q96NL8 207 aa30.12■■■□□ 2.41
CCDC85B-201ENST00000312579 CAMTA1Q9Y6Y1 1673 aa30.11■■■□□ 2.41
CCDC85B-201ENST00000312579 INSRP06213 1382 aa30.1■■■□□ 2.41
CCDC85B-201ENST00000312579 LMO7Q8WWI1 1683 aa30.1■■■□□ 2.41
CCDC85B-201ENST00000312579 CCER2I3L3R5 266 aa30.1■■■□□ 2.41
CCDC85B-201ENST00000312579 MEX3CQ5U5Q3 659 aaKnown RBP30.1■■■□□ 2.41
CCDC85B-201ENST00000312579 EIF4A2Q14240 407 aaKnown RBP30.09■■■□□ 2.41
CCDC85B-201ENST00000312579 BTG4Q9NY30 223 aa30.09■■■□□ 2.41
CCDC85B-201ENST00000312579 COL14A1Q05707 1796 aaKnown RBP30.09■■■□□ 2.41
CCDC85B-201ENST00000312579 ANKRD24Q8TF21 1146 aa30.07■■■□□ 2.4
CCDC85B-201ENST00000312579 DIAPH1O60610 1272 aaKnown RBP30.06■■■□□ 2.4
CCDC85B-201ENST00000312579 IL13P35225 146 aa30.06■■■□□ 2.4
CCDC85B-201ENST00000312579 BLMP54132 1417 aaPredicted RBP30.06■■■□□ 2.4
CCDC85B-201ENST00000312579 NGLY1Q96IV0 654 aa30.06■■■□□ 2.4
CCDC85B-201ENST00000312579 STRN4Q9NRL3 753 aa30.05■■■□□ 2.4
CCDC85B-201ENST00000312579 PLCH1Q4KWH8 1693 aa30.04■■■□□ 2.4
CCDC85B-201ENST00000312579 ABCC6O95255 1503 aa30.04■■■□□ 2.4
CCDC85B-201ENST00000312579 ERBB3P21860 1342 aa30.02■■■□□ 2.4
CCDC85B-201ENST00000312579 COL5A2P05997 1499 aaPredicted RBP30.02■■■□□ 2.4
CCDC85B-201ENST00000312579 U2SURPO15042 1029 aaKnown RBP30.01■■■□□ 2.4
CCDC85B-201ENST00000312579 CSB-PGBD3P0DP91 1061 aa30.01■■■□□ 2.39
CCDC85B-201ENST00000312579 EVA1CP58658 441 aa30.01■■■□□ 2.39
CCDC85B-201ENST00000312579 SLIT2O94813 1529 aa30■■■□□ 2.39
CCDC85B-201ENST00000312579 LARP1Q6PKG0 1096 aaKnown RBP29.99■■■□□ 2.39
CCDC85B-201ENST00000312579 PNISRQ8TF01 805 aaKnown RBP29.99■■■□□ 2.39
CCDC85B-201ENST00000312579 USHBP1Q8N6Y0 703 aa29.98■■■□□ 2.39
CCDC85B-201ENST00000312579 EYA1Q99502 592 aa29.98■■■□□ 2.39
CCDC85B-201ENST00000312579 RGPD2P0DJD1 1756 aa29.98■■■□□ 2.39
CCDC85B-201ENST00000312579 NBPF6Q5VWK0 638 aa29.97■■■□□ 2.39
CCDC85B-201ENST00000312579 NBPF4Q96M43 638 aa29.97■■■□□ 2.39
CCDC85B-201ENST00000312579 FNBP4Q8N3X1 1017 aaPredicted RBP29.96■■■□□ 2.39
CCDC85B-201ENST00000312579 AFF2P51816 1311 aa29.96■■■□□ 2.39
CCDC85B-201ENST00000312579 NRAPQ86VF7 1730 aa29.96■■■□□ 2.39
CCDC85B-201ENST00000312579 U2AF1L5P0DN76 240 aaPredicted RBP29.96■■■□□ 2.39
CCDC85B-201ENST00000312579 U2AF1Q01081 240 aaKnown RBP eCLIP29.96■■■□□ 2.39
CCDC85B-201ENST00000312579 FAM9BQ8IZU0 186 aa29.96■■■□□ 2.39
CCDC85B-201ENST00000312579 NLRP2Q9NX02 1062 aa29.96■■■□□ 2.39
CCDC85B-201ENST00000312579 NUDCQ9Y266 331 aa29.96■■■□□ 2.39
CCDC85B-201ENST00000312579 WDR17Q8IZU2 1322 aa29.95■■■□□ 2.39
CCDC85B-201ENST00000312579 BCL9LQ86UU0 1499 aa29.95■■■□□ 2.38
CCDC85B-201ENST00000312579 HMOX1P09601 288 aa29.94■■■□□ 2.38
CCDC85B-201ENST00000312579 WDR43Q15061 677 aaKnown RBP eCLIP29.94■■■□□ 2.38
CCDC85B-201ENST00000312579 TOM1L2Q6ZVM7 507 aa29.94■■■□□ 2.38
CCDC85B-201ENST00000312579 NWD2Q9ULI1 1742 aa29.93■■■□□ 2.38
CCDC85B-201ENST00000312579 AEBP1Q8IUX7 1158 aa29.93■■■□□ 2.38
CCDC85B-201ENST00000312579 USP21Q9UK80 565 aa29.93■■■□□ 2.38
CCDC85B-201ENST00000312579 ADAMTS8Q9UP79 889 aa29.93■■■□□ 2.38
CCDC85B-201ENST00000312579 UNC5CLQ8IV45 518 aa29.92■■■□□ 2.38
CCDC85B-201ENST00000312579 RGPD1P0DJD0 1748 aa29.92■■■□□ 2.38
CCDC85B-201ENST00000312579 IGSF1Q8N6C5 1336 aa29.91■■■□□ 2.38
CCDC85B-201ENST00000312579 SULT6B1Q6IMI4 303 aa29.91■■■□□ 2.38
CCDC85B-201ENST00000312579 USP35Q9P2H5 1018 aa29.9■■■□□ 2.38
CCDC85B-201ENST00000312579 YTHDC1Q96MU7 727 aaKnown RBP29.88■■■□□ 2.37
CCDC85B-201ENST00000312579 CRB1P82279 1406 aa29.87■■■□□ 2.37
CCDC85B-201ENST00000312579 CCDC9Q9Y3X0 531 aaKnown RBP29.86■■■□□ 2.37
CCDC85B-201ENST00000312579 FAM208AQ9UK61 1670 aaKnown RBP29.86■■■□□ 2.37
CCDC85B-201ENST00000312579 CARD10Q9BWT7 1032 aa29.86■■■□□ 2.37
CCDC85B-201ENST00000312579 CCDC146Q8IYE0 955 aa29.84■■■□□ 2.37
CCDC85B-201ENST00000312579 RSPH6AQ9H0K4 717 aa29.84■■■□□ 2.37
CCDC85B-201ENST00000312579 VPS72Q15906 364 aa29.82■■■□□ 2.36
CCDC85B-201ENST00000312579 NCAPD2Q15021 1401 aa29.82■■■□□ 2.36
CCDC85B-201ENST00000312579 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.82■■■□□ 2.36
CCDC85B-201ENST00000312579 SPATA31A5Q5VU36 1347 aa29.82■■■□□ 2.36
CCDC85B-201ENST00000312579 SPATA31A7Q8IWB4 1347 aa29.82■■■□□ 2.36
CCDC85B-201ENST00000312579 SENP3-EIF4A1A0A087X0R7 540 aa29.81■■■□□ 2.36
CCDC85B-201ENST00000312579 PRKAR2BP31323 418 aa29.81■■■□□ 2.36
CCDC85B-201ENST00000312579 KDRP35968 1356 aa29.81■■■□□ 2.36
CCDC85B-201ENST00000312579 SPATA31A1Q5TZJ5 1347 aa29.81■■■□□ 2.36
CCDC85B-201ENST00000312579 FCHSD2O94868 740 aa29.79■■■□□ 2.36
CCDC85B-201ENST00000312579 ATRNO75882 1429 aa29.77■■■□□ 2.36
CCDC85B-201ENST00000312579 PLEKHF1Q96S99 279 aa29.77■■■□□ 2.36
CCDC85B-201ENST00000312579 QTRT2Q9H974 415 aaKnown RBP29.77■■■□□ 2.36
CCDC85B-201ENST00000312579 TCP11L2Q8N4U5 519 aa29.76■■■□□ 2.36
CCDC85B-201ENST00000312579 PHACTR3Q96KR7 559 aa29.76■■■□□ 2.36
CCDC85B-201ENST00000312579 RGS17Q9UGC6 210 aaPredicted RBP29.76■■■□□ 2.36
CCDC85B-201ENST00000312579 TRPC5Q9UL62 973 aaPredicted RBP29.76■■■□□ 2.36
CCDC85B-201ENST00000312579 MEGF6O75095 1541 aa29.76■■■□□ 2.35
CCDC85B-201ENST00000312579 ZNF772Q68DY9 489 aaPredicted RBP29.73■■■□□ 2.35
CCDC85B-201ENST00000312579 RAPGEF4Q8WZA2 1011 aa29.73■■■□□ 2.35
CCDC85B-201ENST00000312579 GJD4Q96KN9 370 aaPredicted RBP29.73■■■□□ 2.35
CCDC85B-201ENST00000312579 PHF23Q9BUL5 403 aaPredicted RBP29.72■■■□□ 2.35
CCDC85B-201ENST00000312579 IL2RBP14784 551 aa29.71■■■□□ 2.35
CCDC85B-201ENST00000312579 FAM98CQ17RN3 349 aaKnown RBP29.71■■■□□ 2.35
CCDC85B-201ENST00000312579 RUNDC1Q96C34 613 aa29.71■■■□□ 2.35
CCDC85B-201ENST00000312579 GLI3P10071 1580 aa29.71■■■□□ 2.35
CCDC85B-201ENST00000312579 TATP17735 454 aaPredicted RBP29.71■■■□□ 2.35
CCDC85B-201ENST00000312579 DISP2A7MBM2 1401 aa29.69■■■□□ 2.34
CCDC85B-201ENST00000312579 THRAP3Q9Y2W1 955 aaKnown RBP29.69■■■□□ 2.34
CCDC85B-201ENST00000312579 PNNQ9H307 717 aaKnown RBP29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms