RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 ZNF316A6NFI3 1004 aaPredicted RBP30.22■■■□□ 2.43
SNUPN-201ENST00000308588 STRN4Q9NRL3 753 aa30.22■■■□□ 2.43
SNUPN-201ENST00000308588 ABCC6O95255 1503 aa30.22■■■□□ 2.43
SNUPN-201ENST00000308588 COL5A2P05997 1499 aaPredicted RBP30.22■■■□□ 2.43
SNUPN-201ENST00000308588 DDX10Q13206 875 aaKnown RBP30.22■■■□□ 2.43
SNUPN-201ENST00000308588 NPC1L1Q9UHC9 1359 aa30.21■■■□□ 2.43
SNUPN-201ENST00000308588 EVA1CP58658 441 aa30.21■■■□□ 2.43
SNUPN-201ENST00000308588 MORC1Q86VD1 984 aa30.21■■■□□ 2.43
SNUPN-201ENST00000308588 RXRBP28702 533 aa30.2■■■□□ 2.42
SNUPN-201ENST00000308588 TNNT2P45379 298 aaPredicted RBP30.2■■■□□ 2.42
SNUPN-201ENST00000308588 CC2D1BQ5T0F9 858 aaKnown RBP30.2■■■□□ 2.42
SNUPN-201ENST00000308588 IP6K1Q92551 441 aa30.2■■■□□ 2.42
SNUPN-201ENST00000308588 GJD4Q96KN9 370 aaPredicted RBP30.2■■■□□ 2.42
SNUPN-201ENST00000308588 RBM6P78332 1123 aaKnown RBP30.19■■■□□ 2.42
SNUPN-201ENST00000308588 RGPD5Q99666 1765 aa30.19■■■□□ 2.42
SNUPN-201ENST00000308588 AMPHP49418 695 aa30.17■■■□□ 2.42
SNUPN-201ENST00000308588 LARP1Q6PKG0 1096 aaKnown RBP30.17■■■□□ 2.42
SNUPN-201ENST00000308588 HOXC9P31274 260 aa30.17■■■□□ 2.42
SNUPN-201ENST00000308588 CCDC9Q9Y3X0 531 aaKnown RBP30.17■■■□□ 2.42
SNUPN-201ENST00000308588 EMILIN1Q9Y6C2 1016 aa30.17■■■□□ 2.42
SNUPN-201ENST00000308588 POLKQ9UBT6 870 aa30.15■■■□□ 2.42
SNUPN-201ENST00000308588 SPATA31A5Q5VU36 1347 aa30.15■■■□□ 2.42
SNUPN-201ENST00000308588 SPATA31A7Q8IWB4 1347 aa30.15■■■□□ 2.42
SNUPN-201ENST00000308588 RTL1A6NKG5 1358 aa30.14■■■□□ 2.42
SNUPN-201ENST00000308588 ILDR2Q71H61 639 aa30.14■■■□□ 2.42
SNUPN-201ENST00000308588 BLMP54132 1417 aaPredicted RBP30.14■■■□□ 2.42
SNUPN-201ENST00000308588 GLI3P10071 1580 aa30.14■■■□□ 2.42
SNUPN-201ENST00000308588 MAP2P11137 1827 aaKnown RBP30.13■■■□□ 2.41
SNUPN-201ENST00000308588 CNGB1Q14028 1251 aaPredicted RBP30.13■■■□□ 2.41
SNUPN-201ENST00000308588 KIF24Q5T7B8 1368 aa30.13■■■□□ 2.41
SNUPN-201ENST00000308588 PEAK1Q9H792 1746 aa30.13■■■□□ 2.41
SNUPN-201ENST00000308588 ERBB3P21860 1342 aa30.12■■■□□ 2.41
SNUPN-201ENST00000308588 WDR17Q8IZU2 1322 aa30.12■■■□□ 2.41
SNUPN-201ENST00000308588 SPATA31A1Q5TZJ5 1347 aa30.11■■■□□ 2.41
SNUPN-201ENST00000308588 FLT4P35916 1363 aa30.1■■■□□ 2.41
SNUPN-201ENST00000308588 ANKRD24Q8TF21 1146 aa30.1■■■□□ 2.41
SNUPN-201ENST00000308588 CRB1P82279 1406 aa30.09■■■□□ 2.41
SNUPN-201ENST00000308588 PPM1GO15355 546 aaPredicted RBP30.09■■■□□ 2.41
SNUPN-201ENST00000308588 HSP90AB2PQ58FF8 381 aa30.09■■■□□ 2.41
SNUPN-201ENST00000308588 CSB-PGBD3P0DP91 1061 aa30.08■■■□□ 2.41
SNUPN-201ENST00000308588 TOM1L2Q6ZVM7 507 aa30.08■■■□□ 2.41
SNUPN-201ENST00000308588 USP35Q9P2H5 1018 aa30.07■■■□□ 2.4
SNUPN-201ENST00000308588 INSRP06213 1382 aa30.06■■■□□ 2.4
SNUPN-201ENST00000308588 CDK12Q9NYV4 1490 aaPredicted RBP30.06■■■□□ 2.4
SNUPN-201ENST00000308588 ONECUT3O60422 494 aaPredicted RBP30.06■■■□□ 2.4
SNUPN-201ENST00000308588 LTV1Q96GA3 475 aaPredicted RBP30.06■■■□□ 2.4
SNUPN-201ENST00000308588 SMG6Q86US8 1419 aaKnown RBP30.05■■■□□ 2.4
SNUPN-201ENST00000308588 RGS12O14924 1447 aa30.03■■■□□ 2.4
SNUPN-201ENST00000308588 FAM98CQ17RN3 349 aaKnown RBP30.03■■■□□ 2.4
SNUPN-201ENST00000308588 TCP11L2Q8N4U5 519 aa30.03■■■□□ 2.4
SNUPN-201ENST00000308588 CARD10Q9BWT7 1032 aa30.03■■■□□ 2.4
SNUPN-201ENST00000308588 NLRP2Q9NX02 1062 aa30.01■■■□□ 2.4
SNUPN-201ENST00000308588 THRAP3Q9Y2W1 955 aaKnown RBP30.01■■■□□ 2.4
SNUPN-201ENST00000308588 BARGINQ6ZT62 677 aa30.01■■■□□ 2.39
SNUPN-201ENST00000308588 MTHFSP49914 203 aa29.99■■■□□ 2.39
SNUPN-201ENST00000308588 SEPT12Q8IYM1 358 aa29.98■■■□□ 2.39
SNUPN-201ENST00000308588 PARD3Q8TEW0 1356 aa29.96■■■□□ 2.39
SNUPN-201ENST00000308588 FAM208AQ9UK61 1670 aaKnown RBP29.96■■■□□ 2.39
SNUPN-201ENST00000308588 NBPF6Q5VWK0 638 aa29.95■■■□□ 2.38
SNUPN-201ENST00000308588 NBPF4Q96M43 638 aa29.95■■■□□ 2.38
SNUPN-201ENST00000308588 THSD7AQ9UPZ6 1657 aa29.94■■■□□ 2.38
SNUPN-201ENST00000308588 RGPD2P0DJD1 1756 aa29.93■■■□□ 2.38
SNUPN-201ENST00000308588 EIF4A2Q14240 407 aaKnown RBP29.93■■■□□ 2.38
SNUPN-201ENST00000308588 A0A0G2JS52 829 aa29.92■■■□□ 2.38
SNUPN-201ENST00000308588 PPP2R1AP30153 589 aa29.92■■■□□ 2.38
SNUPN-201ENST00000308588 MYT1Q01538 1121 aa29.92■■■□□ 2.38
SNUPN-201ENST00000308588 DISP2A7MBM2 1401 aa29.9■■■□□ 2.38
SNUPN-201ENST00000308588 RALBP1Q15311 655 aa29.88■■■□□ 2.37
SNUPN-201ENST00000308588 EYA1Q99502 592 aa29.88■■■□□ 2.37
SNUPN-201ENST00000308588 BRWD3Q6RI45 1802 aa29.88■■■□□ 2.37
SNUPN-201ENST00000308588 USHBP1Q8N6Y0 703 aa29.87■■■□□ 2.37
SNUPN-201ENST00000308588 CDCA7Q9BWT1 371 aaPredicted RBP29.87■■■□□ 2.37
SNUPN-201ENST00000308588 WNK3Q9BYP7 1800 aa29.87■■■□□ 2.37
SNUPN-201ENST00000308588 IL13P35225 146 aa29.86■■■□□ 2.37
SNUPN-201ENST00000308588 IL2RBP14784 551 aa29.85■■■□□ 2.37
SNUPN-201ENST00000308588 PARP4Q9UKK3 1724 aaKnown RBP29.84■■■□□ 2.37
SNUPN-201ENST00000308588 NCAPD2Q15021 1401 aa29.84■■■□□ 2.37
SNUPN-201ENST00000308588 KRT27Q7Z3Y8 459 aa29.83■■■□□ 2.37
SNUPN-201ENST00000308588 COL3A1P02461 1466 aaPredicted RBP29.83■■■□□ 2.37
SNUPN-201ENST00000308588 IGSF1Q8N6C5 1336 aa29.82■■■□□ 2.36
SNUPN-201ENST00000308588 PRKRIP1Q9H875 184 aaPredicted RBP29.81■■■□□ 2.36
SNUPN-201ENST00000308588 DIAPH1O60610 1272 aaKnown RBP29.81■■■□□ 2.36
SNUPN-201ENST00000308588 DDB1Q16531 1140 aa29.81■■■□□ 2.36
SNUPN-201ENST00000308588 LRRC37A3O60309 1634 aa29.8■■■□□ 2.36
SNUPN-201ENST00000308588 MEGF6O75095 1541 aa29.78■■■□□ 2.36
SNUPN-201ENST00000308588 PDE3BQ13370 1112 aa29.78■■■□□ 2.36
SNUPN-201ENST00000308588 EXOC5O00471 708 aa29.77■■■□□ 2.36
SNUPN-201ENST00000308588 CFAP53Q96M91 514 aa29.77■■■□□ 2.36
SNUPN-201ENST00000308588 RAPGEF4Q8WZA2 1011 aa29.76■■■□□ 2.36
SNUPN-201ENST00000308588 RGPD1P0DJD0 1748 aa29.76■■■□□ 2.35
SNUPN-201ENST00000308588 MYBBP1AQ9BQG0 1328 aaKnown RBP29.76■■■□□ 2.35
SNUPN-201ENST00000308588 FAM182BQ5T319 152 aa29.76■■■□□ 2.35
SNUPN-201ENST00000308588 OVOS2A0A0G2JMS6 1433 aa29.74■■■□□ 2.35
SNUPN-201ENST00000308588 TNS2Q63HR2 1409 aa29.74■■■□□ 2.35
SNUPN-201ENST00000308588 TATP17735 454 aaPredicted RBP29.73■■■□□ 2.35
SNUPN-201ENST00000308588 AEBP1Q8IUX7 1158 aa29.72■■■□□ 2.35
SNUPN-201ENST00000308588 SULT6B1Q6IMI4 303 aa29.71■■■□□ 2.35
SNUPN-201ENST00000308588 MARCH10Q8NA82 808 aaPredicted RBP29.71■■■□□ 2.35
SNUPN-201ENST00000308588 EP400Q96L91 3159 aa29.7■■■□□ 2.35
SNUPN-201ENST00000308588 KDRP35968 1356 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms