RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 TNNT2P45379 298 aaPredicted RBP27.2■■□□□ 1.94
SCAMP3-201ENST00000302631 NGLY1Q96IV0 654 aa27.2■■□□□ 1.94
SCAMP3-201ENST00000302631 AXIN2Q9Y2T1 843 aa27.2■■□□□ 1.94
SCAMP3-201ENST00000302631 EMILIN1Q9Y6C2 1016 aa27.2■■□□□ 1.94
SCAMP3-201ENST00000302631 BCL9LQ86UU0 1499 aa27.19■■□□□ 1.94
SCAMP3-201ENST00000302631 HOXC9P31274 260 aa27.18■■□□□ 1.94
SCAMP3-201ENST00000302631 PRKRIP1Q9H875 184 aaPredicted RBP27.18■■□□□ 1.94
SCAMP3-201ENST00000302631 BLMP54132 1417 aaPredicted RBP27.18■■□□□ 1.94
SCAMP3-201ENST00000302631 CNGB1Q14028 1251 aaPredicted RBP27.17■■□□□ 1.94
SCAMP3-201ENST00000302631 FLT4P35916 1363 aa27.17■■□□□ 1.94
SCAMP3-201ENST00000302631 BTG4Q9NY30 223 aa27.16■■□□□ 1.94
SCAMP3-201ENST00000302631 PPP2R1AP30153 589 aa27.16■■□□□ 1.94
SCAMP3-201ENST00000302631 AMPHP49418 695 aa27.16■■□□□ 1.94
SCAMP3-201ENST00000302631 AFF2P51816 1311 aa27.16■■□□□ 1.94
SCAMP3-201ENST00000302631 COL5A2P05997 1499 aaPredicted RBP27.15■■□□□ 1.94
SCAMP3-201ENST00000302631 INSRP06213 1382 aa27.15■■□□□ 1.94
SCAMP3-201ENST00000302631 CDK12Q9NYV4 1490 aaPredicted RBP27.14■■□□□ 1.94
SCAMP3-201ENST00000302631 ZBTB7CA1YPR0 619 aa27.14■■□□□ 1.93
SCAMP3-201ENST00000302631 MTHFSP49914 203 aa27.13■■□□□ 1.93
SCAMP3-201ENST00000302631 UNC5CLQ8IV45 518 aa27.13■■□□□ 1.93
SCAMP3-201ENST00000302631 HSP90AB2PQ58FF8 381 aa27.11■■□□□ 1.93
SCAMP3-201ENST00000302631 USP21Q9UK80 565 aa27.11■■□□□ 1.93
SCAMP3-201ENST00000302631 ERBB3P21860 1342 aa27.09■■□□□ 1.93
SCAMP3-201ENST00000302631 RGS17Q9UGC6 210 aaPredicted RBP27.09■■□□□ 1.93
SCAMP3-201ENST00000302631 MYBBP1AQ9BQG0 1328 aaKnown RBP27.09■■□□□ 1.93
SCAMP3-201ENST00000302631 FAM208AQ9UK61 1670 aaKnown RBP27.08■■□□□ 1.93
SCAMP3-201ENST00000302631 ATRNO75882 1429 aa27.07■■□□□ 1.92
SCAMP3-201ENST00000302631 ZNF772Q68DY9 489 aaPredicted RBP27.07■■□□□ 1.92
SCAMP3-201ENST00000302631 WDR17Q8IZU2 1322 aa27.07■■□□□ 1.92
SCAMP3-201ENST00000302631 PPM1GO15355 546 aaPredicted RBP27.07■■□□□ 1.92
SCAMP3-201ENST00000302631 COL3A1P02461 1466 aaPredicted RBP27.06■■□□□ 1.92
SCAMP3-201ENST00000302631 ANP32CO43423 234 aa27.06■■□□□ 1.92
SCAMP3-201ENST00000302631 VPS72Q15906 364 aa27.06■■□□□ 1.92
SCAMP3-201ENST00000302631 ANKRD24Q8TF21 1146 aa27.06■■□□□ 1.92
SCAMP3-201ENST00000302631 EVA1CP58658 441 aa27.04■■□□□ 1.92
SCAMP3-201ENST00000302631 RGPD2P0DJD1 1756 aa27.04■■□□□ 1.92
SCAMP3-201ENST00000302631 LARP1Q6PKG0 1096 aaKnown RBP27.03■■□□□ 1.92
SCAMP3-201ENST00000302631 STRN4Q9NRL3 753 aa27.03■■□□□ 1.92
SCAMP3-201ENST00000302631 TRPC5Q9UL62 973 aaPredicted RBP27.03■■□□□ 1.92
SCAMP3-201ENST00000302631 CRB1P82279 1406 aa27.03■■□□□ 1.92
SCAMP3-201ENST00000302631 DIEXFQ68CQ4 756 aaKnown RBP27.02■■□□□ 1.92
SCAMP3-201ENST00000302631 EIF4A2Q14240 407 aaKnown RBP27.01■■□□□ 1.91
SCAMP3-201ENST00000302631 SPATA31A5Q5VU36 1347 aa27.01■■□□□ 1.91
SCAMP3-201ENST00000302631 SPATA31A7Q8IWB4 1347 aa27.01■■□□□ 1.91
SCAMP3-201ENST00000302631 QTRT2Q9H974 415 aaKnown RBP27■■□□□ 1.91
SCAMP3-201ENST00000302631 NCAPD2Q15021 1401 aa26.99■■□□□ 1.91
SCAMP3-201ENST00000302631 IL13P35225 146 aa26.99■■□□□ 1.91
SCAMP3-201ENST00000302631 PHF23Q9BUL5 403 aaPredicted RBP26.99■■□□□ 1.91
SCAMP3-201ENST00000302631 CARD10Q9BWT7 1032 aa26.99■■□□□ 1.91
SCAMP3-201ENST00000302631 RGPD1P0DJD0 1748 aa26.99■■□□□ 1.91
SCAMP3-201ENST00000302631 SPATA31A1Q5TZJ5 1347 aa26.98■■□□□ 1.91
SCAMP3-201ENST00000302631 GLI3P10071 1580 aa26.98■■□□□ 1.91
SCAMP3-201ENST00000302631 LTV1Q96GA3 475 aaPredicted RBP26.98■■□□□ 1.91
SCAMP3-201ENST00000302631 CSB-PGBD3P0DP91 1061 aa26.97■■□□□ 1.91
SCAMP3-201ENST00000302631 GJD4Q96KN9 370 aaPredicted RBP26.97■■□□□ 1.91
SCAMP3-201ENST00000302631 CFAP53Q96M91 514 aa26.97■■□□□ 1.91
SCAMP3-201ENST00000302631 NBPF6Q5VWK0 638 aa26.96■■□□□ 1.91
SCAMP3-201ENST00000302631 POTEAQ6S8J7 498 aa26.96■■□□□ 1.91
SCAMP3-201ENST00000302631 TOM1L2Q6ZVM7 507 aa26.96■■□□□ 1.91
SCAMP3-201ENST00000302631 NBPF4Q96M43 638 aa26.96■■□□□ 1.91
SCAMP3-201ENST00000302631 DIAPH1O60610 1272 aaKnown RBP26.95■■□□□ 1.9
SCAMP3-201ENST00000302631 THRAP3Q9Y2W1 955 aaKnown RBP26.95■■□□□ 1.9
SCAMP3-201ENST00000302631 EYA1Q99502 592 aa26.94■■□□□ 1.9
SCAMP3-201ENST00000302631 WNK3Q9BYP7 1800 aa26.94■■□□□ 1.9
SCAMP3-201ENST00000302631 NLRP2Q9NX02 1062 aa26.93■■□□□ 1.9
SCAMP3-201ENST00000302631 IGSF1Q8N6C5 1336 aa26.93■■□□□ 1.9
SCAMP3-201ENST00000302631 ONECUT3O60422 494 aaPredicted RBP26.91■■□□□ 1.9
SCAMP3-201ENST00000302631 RBM6P78332 1123 aaKnown RBP26.91■■□□□ 1.9
SCAMP3-201ENST00000302631 BARGINQ6ZT62 677 aa26.91■■□□□ 1.9
SCAMP3-201ENST00000302631 TCP11L2Q8N4U5 519 aa26.91■■□□□ 1.9
SCAMP3-201ENST00000302631 CCDC9Q9Y3X0 531 aaKnown RBP26.9■■□□□ 1.9
SCAMP3-201ENST00000302631 DISP2A7MBM2 1401 aa26.89■■□□□ 1.9
SCAMP3-201ENST00000302631 THSD7AQ9UPZ6 1657 aa26.88■■□□□ 1.89
SCAMP3-201ENST00000302631 KDRP35968 1356 aa26.87■■□□□ 1.89
SCAMP3-201ENST00000302631 RXRBP28702 533 aa26.86■■□□□ 1.89
SCAMP3-201ENST00000302631 CCDC184Q52MB2 194 aa26.86■■□□□ 1.89
SCAMP3-201ENST00000302631 USP35Q9P2H5 1018 aa26.86■■□□□ 1.89
SCAMP3-201ENST00000302631 NUDCQ9Y266 331 aa26.86■■□□□ 1.89
SCAMP3-201ENST00000302631 PARP4Q9UKK3 1724 aaKnown RBP26.85■■□□□ 1.89
SCAMP3-201ENST00000302631 USHBP1Q8N6Y0 703 aa26.84■■□□□ 1.89
SCAMP3-201ENST00000302631 CDCA7Q9BWT1 371 aaPredicted RBP26.84■■□□□ 1.89
SCAMP3-201ENST00000302631 PLEKHG2Q9H7P9 1386 aa26.84■■□□□ 1.89
SCAMP3-201ENST00000302631 FAM98CQ17RN3 349 aaKnown RBP26.82■■□□□ 1.88
SCAMP3-201ENST00000302631 IL2RBP14784 551 aa26.81■■□□□ 1.88
SCAMP3-201ENST00000302631 MEGF6O75095 1541 aa26.8■■□□□ 1.88
SCAMP3-201ENST00000302631 CCER2I3L3R5 266 aa26.8■■□□□ 1.88
SCAMP3-201ENST00000302631 SULT6B1Q6IMI4 303 aa26.8■■□□□ 1.88
SCAMP3-201ENST00000302631 AEBP1Q8IUX7 1158 aa26.8■■□□□ 1.88
SCAMP3-201ENST00000302631 U2SURPO15042 1029 aaKnown RBP26.79■■□□□ 1.88
SCAMP3-201ENST00000302631 MIER1Q8N108 512 aa26.79■■□□□ 1.88
SCAMP3-201ENST00000302631 OVOS2A0A0G2JMS6 1433 aa26.78■■□□□ 1.88
SCAMP3-201ENST00000302631 LRRC37A3O60309 1634 aa26.78■■□□□ 1.88
SCAMP3-201ENST00000302631 PKD1L3Q7Z443 1732 aa26.77■■□□□ 1.88
SCAMP3-201ENST00000302631 MRS2Q9HD23 443 aa26.77■■□□□ 1.88
SCAMP3-201ENST00000302631 BRWD3Q6RI45 1802 aa26.77■■□□□ 1.88
SCAMP3-201ENST00000302631 RGS12O14924 1447 aa26.76■■□□□ 1.87
SCAMP3-201ENST00000302631 FCHSD2O94868 740 aa26.76■■□□□ 1.87
SCAMP3-201ENST00000302631 U2AF1L5P0DN76 240 aaPredicted RBP26.76■■□□□ 1.87
SCAMP3-201ENST00000302631 U2AF1Q01081 240 aaKnown RBP eCLIP26.76■■□□□ 1.87
SCAMP3-201ENST00000302631 SEPT12Q8IYM1 358 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms