RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 SRRTQ9BXP5 876 aaKnown RBP13.86□□□□□ -0.19
SNIP1-201ENST00000296215 ARFGAP3Q9NP61 516 aa13.86□□□□□ -0.19
SNIP1-201ENST00000296215 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.86□□□□□ -0.19
SNIP1-201ENST00000296215 SWAP70Q9UH65 585 aa13.86□□□□□ -0.19
SNIP1-201ENST00000296215 GOLGA6L10A0A0M3HER8 536 aa13.86□□□□□ -0.19
SNIP1-201ENST00000296215 KIF3CO14782 793 aa13.86□□□□□ -0.19
SNIP1-201ENST00000296215 TBC1D32Q96NH3 1257 aa13.86□□□□□ -0.19
SNIP1-201ENST00000296215 RBSNQ9H1K0 784 aa13.86□□□□□ -0.19
SNIP1-201ENST00000296215 CHRM1P11229 460 aaPredicted RBP13.85□□□□□ -0.19
SNIP1-201ENST00000296215 ZKSCAN8Q15776 578 aaPredicted RBP13.85□□□□□ -0.19
SNIP1-201ENST00000296215 WWC2Q6AWC2 1192 aa13.85□□□□□ -0.19
SNIP1-201ENST00000296215 LUZP1Q86V48 1076 aa13.85□□□□□ -0.19
SNIP1-201ENST00000296215 HDAC1Q13547 482 aaPredicted RBP13.85□□□□□ -0.19
SNIP1-201ENST00000296215 PDZRN3Q9UPQ7 1066 aa13.85□□□□□ -0.19
SNIP1-201ENST00000296215 ERCC6Q03468 1493 aa13.85□□□□□ -0.19
SNIP1-201ENST00000296215 DNAJC21Q5F1R6 531 aaKnown RBP13.85□□□□□ -0.19
SNIP1-201ENST00000296215 GAS2L3Q86XJ1 694 aa13.85□□□□□ -0.19
SNIP1-201ENST00000296215 C17orf53Q8N3J3 647 aaPredicted RBP13.85□□□□□ -0.19
SNIP1-201ENST00000296215 URI1O94763 535 aaPredicted RBP13.84□□□□□ -0.19
SNIP1-201ENST00000296215 TRMT1Q9NXH9 659 aaKnown RBP13.84□□□□□ -0.19
SNIP1-201ENST00000296215 CNTLNQ9NXG0 1405 aa13.84□□□□□ -0.19
SNIP1-201ENST00000296215 EGFL6Q8IUX8 553 aa13.84□□□□□ -0.19
SNIP1-201ENST00000296215 GOLGA5Q8TBA6 731 aa13.84□□□□□ -0.19
SNIP1-201ENST00000296215 ERCC3P19447 782 aa13.84□□□□□ -0.19
SNIP1-201ENST00000296215 GBP3Q9H0R5 595 aa13.84□□□□□ -0.19
SNIP1-201ENST00000296215 KIF4AO95239 1232 aa13.84□□□□□ -0.19
SNIP1-201ENST00000296215 BRPF1P55201 1214 aaPredicted RBP13.84□□□□□ -0.19
SNIP1-201ENST00000296215 PSMD2Q13200 908 aa13.84□□□□□ -0.19
SNIP1-201ENST00000296215 CCDC146Q8IYE0 955 aa13.84□□□□□ -0.19
SNIP1-201ENST00000296215 MRFAP1Q9Y605 127 aa13.84□□□□□ -0.19
SNIP1-201ENST00000296215 MIPOL1Q8TD10 442 aa13.83□□□□□ -0.19
SNIP1-201ENST00000296215 VPS18Q9P253 973 aa13.83□□□□□ -0.19
SNIP1-201ENST00000296215 FAM177A1Q8N128 213 aaPredicted RBP13.83□□□□□ -0.2
SNIP1-201ENST00000296215 TRIM6Q9C030 488 aaPredicted RBP13.83□□□□□ -0.2
SNIP1-201ENST00000296215 NEDD9Q14511 834 aa13.83□□□□□ -0.2
SNIP1-201ENST00000296215 DHX8Q14562 1220 aaKnown RBP13.83□□□□□ -0.2
SNIP1-201ENST00000296215 MMS22LQ6ZRQ5 1243 aa13.83□□□□□ -0.2
SNIP1-201ENST00000296215 NUTM1Q86Y26 1132 aa13.83□□□□□ -0.2
SNIP1-201ENST00000296215 REC8O95072 547 aa13.82□□□□□ -0.2
SNIP1-201ENST00000296215 IRX1P78414 480 aaPredicted RBP13.82□□□□□ -0.2
SNIP1-201ENST00000296215 OTUD6BQ8N6M0 293 aa13.82□□□□□ -0.2
SNIP1-201ENST00000296215 ERO1AQ96HE7 468 aa13.82□□□□□ -0.2
SNIP1-201ENST00000296215 CARD10Q9BWT7 1032 aa13.82□□□□□ -0.2
SNIP1-201ENST00000296215 ARHGAP29Q52LW3 1261 aa13.82□□□□□ -0.2
SNIP1-201ENST00000296215 BICD2Q8TD16 824 aa13.81□□□□□ -0.2
SNIP1-201ENST00000296215 NBPF11Q86T75 865 aa13.81□□□□□ -0.2
SNIP1-201ENST00000296215 WDR66Q8TBY9 1149 aa13.81□□□□□ -0.2
SNIP1-201ENST00000296215 MKRN1Q9UHC7 482 aaKnown RBP13.81□□□□□ -0.2
SNIP1-201ENST00000296215 EIF3AQ14152 1382 aaKnown RBP13.81□□□□□ -0.2
SNIP1-201ENST00000296215 MCM6Q14566 821 aa13.81□□□□□ -0.2
SNIP1-201ENST00000296215 SCLT1Q96NL6 688 aa13.81□□□□□ -0.2
SNIP1-201ENST00000296215 SH3GL3Q99963 347 aa13.81□□□□□ -0.2
SNIP1-201ENST00000296215 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
SNIP1-201ENST00000296215 MAGEA9P43362 315 aa13.8□□□□□ -0.2
SNIP1-201ENST00000296215 RGL3Q3MIN7 710 aa13.8□□□□□ -0.2
SNIP1-201ENST00000296215 ANKRD45Q5TZF3 282 aa13.8□□□□□ -0.2
SNIP1-201ENST00000296215 POTEDQ86YR6 584 aa13.8□□□□□ -0.2
SNIP1-201ENST00000296215 RRP7BPQ9NSQ0 103 aa13.8□□□□□ -0.2
SNIP1-201ENST00000296215 ZNHIT6Q9NWK9 470 aaKnown RBP13.8□□□□□ -0.2
SNIP1-201ENST00000296215 STK26Q9P289 416 aa13.8□□□□□ -0.2
SNIP1-201ENST00000296215 PLEKHD1A6NEE1 506 aa13.8□□□□□ -0.2
SNIP1-201ENST00000296215 GOLGA6L9A6NEM1 432 aa13.8□□□□□ -0.2
SNIP1-201ENST00000296215 APBB1O00213 710 aa13.8□□□□□ -0.2
SNIP1-201ENST00000296215 SEPT14Q6ZU15 432 aa13.8□□□□□ -0.2
SNIP1-201ENST00000296215 CRACR2AQ9BSW2 395 aa13.8□□□□□ -0.2
SNIP1-201ENST00000296215 INPP5BP32019 993 aa13.8□□□□□ -0.2
SNIP1-201ENST00000296215 ATP2B1P20020 1258 aa13.79□□□□□ -0.2
SNIP1-201ENST00000296215 RNF217Q8TC41 542 aa13.79□□□□□ -0.2
SNIP1-201ENST00000296215 CCDC171Q6TFL3 1326 aa13.79□□□□□ -0.2
SNIP1-201ENST00000296215 CASTP20810 708 aaKnown RBP13.79□□□□□ -0.2
SNIP1-201ENST00000296215 ELF2Q15723 593 aa13.79□□□□□ -0.2
SNIP1-201ENST00000296215 EIF5P55010 431 aaKnown RBP13.79□□□□□ -0.2
SNIP1-201ENST00000296215 FAM114A1Q8IWE2 563 aa13.79□□□□□ -0.2
SNIP1-201ENST00000296215 MLECQ14165 292 aa13.79□□□□□ -0.2
SNIP1-201ENST00000296215 SCRIBQ14160 1630 aa13.78□□□□□ -0.2
SNIP1-201ENST00000296215 N4BP2L2Q92802 583 aaPredicted RBP13.78□□□□□ -0.2
SNIP1-201ENST00000296215 FIBPO43427 364 aa13.78□□□□□ -0.2
SNIP1-201ENST00000296215 DDX41Q9UJV9 622 aaKnown RBP13.78□□□□□ -0.2
SNIP1-201ENST00000296215 ZNF445P59923 1031 aa13.78□□□□□ -0.2
SNIP1-201ENST00000296215 CCDC181Q5TID7 509 aa13.78□□□□□ -0.2
SNIP1-201ENST00000296215 NEMFO60524 1076 aa13.78□□□□□ -0.2
SNIP1-201ENST00000296215 MFSD4BQ5TF39 518 aa13.78□□□□□ -0.2
SNIP1-201ENST00000296215 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNIP1-201ENST00000296215 PDRG1Q9NUG6 133 aa13.78□□□□□ -0.2
SNIP1-201ENST00000296215 KIF15Q9NS87 1388 aa13.77□□□□□ -0.2
SNIP1-201ENST00000296215 C20orf194Q5TEA3 1177 aa13.77□□□□□ -0.2
SNIP1-201ENST00000296215 JPH2Q9BR39 696 aaPredicted RBP13.77□□□□□ -0.2
SNIP1-201ENST00000296215 OAS2P29728 719 aaKnown RBP13.77□□□□□ -0.21
SNIP1-201ENST00000296215 SNW1Q13573 536 aaKnown RBP13.77□□□□□ -0.21
SNIP1-201ENST00000296215 CCDC183Q5T5S1 534 aa13.77□□□□□ -0.21
SNIP1-201ENST00000296215 TCHPQ9BT92 498 aa13.77□□□□□ -0.21
SNIP1-201ENST00000296215 FRMD3A2A2Y4 597 aa13.77□□□□□ -0.21
SNIP1-201ENST00000296215 HCLS1P14317 486 aaPredicted RBP13.77□□□□□ -0.21
SNIP1-201ENST00000296215 ODF2LQ9ULJ1 636 aa13.77□□□□□ -0.21
SNIP1-201ENST00000296215 ROCK2O75116 1388 aaKnown RBP13.77□□□□□ -0.21
SNIP1-201ENST00000296215 PRPF38AQ8NAV1 312 aaKnown RBP13.76□□□□□ -0.21
SNIP1-201ENST00000296215 MICAL1Q8TDZ2 1067 aa13.76□□□□□ -0.21
SNIP1-201ENST00000296215 PANK1Q8TE04 598 aa13.76□□□□□ -0.21
SNIP1-201ENST00000296215 CLIP2Q9UDT6 1046 aa13.76□□□□□ -0.21
SNIP1-201ENST00000296215 ANAPC4Q9UJX5 808 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms