RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 PPM1GO15355 546 aaPredicted RBP21.46■■□□□ 1.03
MRPL55-201ENST00000295008 PLCH1Q4KWH8 1693 aa21.46■■□□□ 1.03
MRPL55-201ENST00000295008 ADAMTS2O95450 1211 aa21.45■■□□□ 1.02
MRPL55-201ENST00000295008 AMPHP49418 695 aa21.45■■□□□ 1.02
MRPL55-201ENST00000295008 CHRNA2Q15822 529 aa21.45■■□□□ 1.02
MRPL55-201ENST00000295008 PRDM11Q9NQV5 511 aa21.45■■□□□ 1.02
MRPL55-201ENST00000295008 COL3A1P02461 1466 aaPredicted RBP21.45■■□□□ 1.02
MRPL55-201ENST00000295008 RGPD5Q99666 1765 aa21.43■■□□□ 1.02
MRPL55-201ENST00000295008 HOXC9P31274 260 aa21.43■■□□□ 1.02
MRPL55-201ENST00000295008 BLMP54132 1417 aaPredicted RBP21.42■■□□□ 1.02
MRPL55-201ENST00000295008 FAM83GA6ND36 823 aa21.41■■□□□ 1.02
MRPL55-201ENST00000295008 IP6K1Q92551 441 aa21.41■■□□□ 1.02
MRPL55-201ENST00000295008 CAMTA1Q9Y6Y1 1673 aa21.4■■□□□ 1.02
MRPL55-201ENST00000295008 INSRP06213 1382 aa21.4■■□□□ 1.02
MRPL55-201ENST00000295008 CCDC184Q52MB2 194 aa21.4■■□□□ 1.02
MRPL55-201ENST00000295008 CFAP53Q96M91 514 aa21.4■■□□□ 1.02
MRPL55-201ENST00000295008 NRAPQ86VF7 1730 aa21.4■■□□□ 1.02
MRPL55-201ENST00000295008 NWD2Q9ULI1 1742 aa21.39■■□□□ 1.01
MRPL55-201ENST00000295008 HSP90AB2PQ58FF8 381 aa21.39■■□□□ 1.01
MRPL55-201ENST00000295008 AXIN2Q9Y2T1 843 aa21.38■■□□□ 1.01
MRPL55-201ENST00000295008 COL5A2P05997 1499 aaPredicted RBP21.38■■□□□ 1.01
MRPL55-201ENST00000295008 MEX3CQ5U5Q3 659 aaKnown RBP21.37■■□□□ 1.01
MRPL55-201ENST00000295008 FAM208AQ9UK61 1670 aaKnown RBP21.37■■□□□ 1.01
MRPL55-201ENST00000295008 SLIT2O94813 1529 aa21.36■■□□□ 1.01
MRPL55-201ENST00000295008 CCER2I3L3R5 266 aa21.36■■□□□ 1.01
MRPL55-201ENST00000295008 C8orf37Q96NL8 207 aa21.36■■□□□ 1.01
MRPL55-201ENST00000295008 MRS2Q9HD23 443 aa21.36■■□□□ 1.01
MRPL55-201ENST00000295008 RGPD1P0DJD0 1748 aa21.35■■□□□ 1.01
MRPL55-201ENST00000295008 ERBB3P21860 1342 aa21.34■■□□□ 1.01
MRPL55-201ENST00000295008 EIF4A2Q14240 407 aaKnown RBP21.34■■□□□ 1.01
MRPL55-201ENST00000295008 ANKRD24Q8TF21 1146 aa21.34■■□□□ 1.01
MRPL55-201ENST00000295008 LTV1Q96GA3 475 aaPredicted RBP21.34■■□□□ 1.01
MRPL55-201ENST00000295008 BTG4Q9NY30 223 aa21.34■■□□□ 1.01
MRPL55-201ENST00000295008 DIAPH1O60610 1272 aaKnown RBP21.33■■□□□ 1.01
MRPL55-201ENST00000295008 RGPD2P0DJD1 1756 aa21.33■■□□□ 1
MRPL55-201ENST00000295008 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.32■■□□□ 1
MRPL55-201ENST00000295008 IL13P35225 146 aa21.32■■□□□ 1
MRPL55-201ENST00000295008 NGLY1Q96IV0 654 aa21.31■■□□□ 1
MRPL55-201ENST00000295008 BCL9LQ86UU0 1499 aa21.29■■□□□ 1
MRPL55-201ENST00000295008 STRN4Q9NRL3 753 aa21.29■■□□□ 1
MRPL55-201ENST00000295008 WDR17Q8IZU2 1322 aa21.29■■□□□ 1
MRPL55-201ENST00000295008 CSB-PGBD3P0DP91 1061 aa21.28■■□□□ 1
MRPL55-201ENST00000295008 FNBP4Q8N3X1 1017 aaPredicted RBP21.28■■□□□ 1
MRPL55-201ENST00000295008 U2SURPO15042 1029 aaKnown RBP21.27■■□□□ 1
MRPL55-201ENST00000295008 EVA1CP58658 441 aa21.27■■□□□ 1
MRPL55-201ENST00000295008 PHF23Q9BUL5 403 aaPredicted RBP21.27■■□□□ 1
MRPL55-201ENST00000295008 NUDCQ9Y266 331 aa21.27■■□□□ 1
MRPL55-201ENST00000295008 AFF2P51816 1311 aa21.27■□□□□ 0.99
MRPL55-201ENST00000295008 LARP1Q6PKG0 1096 aaKnown RBP21.26■□□□□ 0.99
MRPL55-201ENST00000295008 CRB1P82279 1406 aa21.26■□□□□ 0.99
MRPL55-201ENST00000295008 NCAPD2Q15021 1401 aa21.26■□□□□ 0.99
MRPL55-201ENST00000295008 IGSF1Q8N6C5 1336 aa21.26■□□□□ 0.99
MRPL55-201ENST00000295008 UNC5CLQ8IV45 518 aa21.25■□□□□ 0.99
MRPL55-201ENST00000295008 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
MRPL55-201ENST00000295008 EYA1Q99502 592 aa21.25■□□□□ 0.99
MRPL55-201ENST00000295008 WDR43Q15061 677 aaKnown RBP eCLIP21.24■□□□□ 0.99
MRPL55-201ENST00000295008 NBPF6Q5VWK0 638 aa21.24■□□□□ 0.99
MRPL55-201ENST00000295008 NBPF4Q96M43 638 aa21.24■□□□□ 0.99
MRPL55-201ENST00000295008 NLRP2Q9NX02 1062 aa21.24■□□□□ 0.99
MRPL55-201ENST00000295008 USP21Q9UK80 565 aa21.24■□□□□ 0.99
MRPL55-201ENST00000295008 U2AF1L5P0DN76 240 aaPredicted RBP21.23■□□□□ 0.99
MRPL55-201ENST00000295008 U2AF1Q01081 240 aaKnown RBP eCLIP21.23■□□□□ 0.99
MRPL55-201ENST00000295008 TOM1L2Q6ZVM7 507 aa21.23■□□□□ 0.99
MRPL55-201ENST00000295008 USHBP1Q8N6Y0 703 aa21.23■□□□□ 0.99
MRPL55-201ENST00000295008 WNK3Q9BYP7 1800 aa21.22■□□□□ 0.99
MRPL55-201ENST00000295008 KDRP35968 1356 aa21.21■□□□□ 0.99
MRPL55-201ENST00000295008 ATRNO75882 1429 aa21.21■□□□□ 0.99
MRPL55-201ENST00000295008 HMOX1P09601 288 aa21.2■□□□□ 0.98
MRPL55-201ENST00000295008 SULT6B1Q6IMI4 303 aa21.2■□□□□ 0.98
MRPL55-201ENST00000295008 AEBP1Q8IUX7 1158 aa21.2■□□□□ 0.98
MRPL55-201ENST00000295008 CARD10Q9BWT7 1032 aa21.2■□□□□ 0.98
MRPL55-201ENST00000295008 VPS72Q15906 364 aa21.19■□□□□ 0.98
MRPL55-201ENST00000295008 FAM9BQ8IZU0 186 aa21.19■□□□□ 0.98
MRPL55-201ENST00000295008 ADAMTS8Q9UP79 889 aa21.19■□□□□ 0.98
MRPL55-201ENST00000295008 SPATA31A5Q5VU36 1347 aa21.18■□□□□ 0.98
MRPL55-201ENST00000295008 SPATA31A7Q8IWB4 1347 aa21.18■□□□□ 0.98
MRPL55-201ENST00000295008 PARP4Q9UKK3 1724 aaKnown RBP21.18■□□□□ 0.98
MRPL55-201ENST00000295008 RSPH6AQ9H0K4 717 aa21.17■□□□□ 0.98
MRPL55-201ENST00000295008 USP35Q9P2H5 1018 aa21.17■□□□□ 0.98
MRPL55-201ENST00000295008 CCDC9Q9Y3X0 531 aaKnown RBP21.17■□□□□ 0.98
MRPL55-201ENST00000295008 SPATA31A1Q5TZJ5 1347 aa21.17■□□□□ 0.98
MRPL55-201ENST00000295008 GLI3P10071 1580 aa21.17■□□□□ 0.98
MRPL55-201ENST00000295008 MEGF6O75095 1541 aa21.16■□□□□ 0.98
MRPL55-201ENST00000295008 TRPC5Q9UL62 973 aaPredicted RBP21.15■□□□□ 0.98
MRPL55-201ENST00000295008 DISP2A7MBM2 1401 aa21.14■□□□□ 0.98
MRPL55-201ENST00000295008 FCHSD2O94868 740 aa21.14■□□□□ 0.97
MRPL55-201ENST00000295008 PRKAR2BP31323 418 aa21.14■□□□□ 0.97
MRPL55-201ENST00000295008 ZNF772Q68DY9 489 aaPredicted RBP21.13■□□□□ 0.97
MRPL55-201ENST00000295008 TCP11L2Q8N4U5 519 aa21.13■□□□□ 0.97
MRPL55-201ENST00000295008 PKD1L3Q7Z443 1732 aa21.12■□□□□ 0.97
MRPL55-201ENST00000295008 CCDC146Q8IYE0 955 aa21.12■□□□□ 0.97
MRPL55-201ENST00000295008 OVOS2A0A0G2JMS6 1433 aa21.12■□□□□ 0.97
MRPL55-201ENST00000295008 RAPGEF4Q8WZA2 1011 aa21.11■□□□□ 0.97
MRPL55-201ENST00000295008 PLEKHF1Q96S99 279 aa21.11■□□□□ 0.97
MRPL55-201ENST00000295008 QTRT2Q9H974 415 aaKnown RBP21.11■□□□□ 0.97
MRPL55-201ENST00000295008 THRAP3Q9Y2W1 955 aaKnown RBP21.11■□□□□ 0.97
MRPL55-201ENST00000295008 THSD7AQ9UPZ6 1657 aa21.11■□□□□ 0.97
MRPL55-201ENST00000295008 LRRC37A3O60309 1634 aa21.11■□□□□ 0.97
MRPL55-201ENST00000295008 GJD4Q96KN9 370 aaPredicted RBP21.1■□□□□ 0.97
MRPL55-201ENST00000295008 IL2RBP14784 551 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms