RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 POLR3GLQ9BT43 218 aa17.39■□□□□ 0.37
SGCE-201ENST00000265735 AXIN2Q9Y2T1 843 aa17.39■□□□□ 0.37
SGCE-201ENST00000265735 CCDC9Q9Y3X0 531 aaKnown RBP17.39■□□□□ 0.37
SGCE-201ENST00000265735 NSD3Q9BZ95 1437 aa17.39■□□□□ 0.37
SGCE-201ENST00000265735 STRN4Q9NRL3 753 aa17.39■□□□□ 0.37
SGCE-201ENST00000265735 KIF7Q2M1P5 1343 aa17.38■□□□□ 0.37
SGCE-201ENST00000265735 SPATA31A1Q5TZJ5 1347 aa17.38■□□□□ 0.37
SGCE-201ENST00000265735 EVA1CP58658 441 aa17.38■□□□□ 0.37
SGCE-201ENST00000265735 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
SGCE-201ENST00000265735 BRWD3Q6RI45 1802 aa17.36■□□□□ 0.37
SGCE-201ENST00000265735 LARP1Q6PKG0 1096 aaKnown RBP17.36■□□□□ 0.37
SGCE-201ENST00000265735 ZBTB7CA1YPR0 619 aa17.36■□□□□ 0.37
SGCE-201ENST00000265735 DDX10Q13206 875 aaKnown RBP17.36■□□□□ 0.37
SGCE-201ENST00000265735 PANK3Q9H999 370 aa17.36■□□□□ 0.37
SGCE-201ENST00000265735 THSD7AQ9UPZ6 1657 aa17.35■□□□□ 0.37
SGCE-201ENST00000265735 CRB1P82279 1406 aa17.34■□□□□ 0.37
SGCE-201ENST00000265735 SEPT12Q8IYM1 358 aa17.34■□□□□ 0.37
SGCE-201ENST00000265735 FAM98CQ17RN3 349 aaKnown RBP17.33■□□□□ 0.37
SGCE-201ENST00000265735 BARGINQ6ZT62 677 aa17.33■□□□□ 0.37
SGCE-201ENST00000265735 CGNL1Q0VF96 1302 aa17.33■□□□□ 0.36
SGCE-201ENST00000265735 WDR17Q8IZU2 1322 aa17.33■□□□□ 0.36
SGCE-201ENST00000265735 CENPBP07199 599 aaPredicted RBP17.32■□□□□ 0.36
SGCE-201ENST00000265735 THRAP3Q9Y2W1 955 aaKnown RBP17.32■□□□□ 0.36
SGCE-201ENST00000265735 ANKRD26Q9UPS8 1709 aa17.32■□□□□ 0.36
SGCE-201ENST00000265735 FBLN1P23142 703 aa17.32■□□□□ 0.36
SGCE-201ENST00000265735 MAP3K19Q56UN5 1328 aa17.32■□□□□ 0.36
SGCE-201ENST00000265735 CCDC7Q96M83 1385 aa17.31■□□□□ 0.36
SGCE-201ENST00000265735 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
SGCE-201ENST00000265735 IP6K1Q92551 441 aa17.31■□□□□ 0.36
SGCE-201ENST00000265735 WASHC2AQ641Q2 1341 aa17.31■□□□□ 0.36
SGCE-201ENST00000265735 BLMP54132 1417 aaPredicted RBP17.31■□□□□ 0.36
SGCE-201ENST00000265735 UPF1Q92900 1129 aaKnown RBP eCLIP17.3■□□□□ 0.36
SGCE-201ENST00000265735 USP35Q9P2H5 1018 aa17.3■□□□□ 0.36
SGCE-201ENST00000265735 ERBB3P21860 1342 aa17.29■□□□□ 0.36
SGCE-201ENST00000265735 TOM1L2Q6ZVM7 507 aa17.29■□□□□ 0.36
SGCE-201ENST00000265735 CARD10Q9BWT7 1032 aa17.28■□□□□ 0.36
SGCE-201ENST00000265735 WNK3Q9BYP7 1800 aa17.27■□□□□ 0.36
SGCE-201ENST00000265735 PARP4Q9UKK3 1724 aaKnown RBP17.27■□□□□ 0.36
SGCE-201ENST00000265735 RTL1A6NKG5 1358 aa17.27■□□□□ 0.36
SGCE-201ENST00000265735 NSD2O96028 1365 aa17.27■□□□□ 0.36
SGCE-201ENST00000265735 HOXC9P31274 260 aa17.27■□□□□ 0.36
SGCE-201ENST00000265735 KIF24Q5T7B8 1368 aa17.26■□□□□ 0.35
SGCE-201ENST00000265735 EP400Q96L91 3159 aa17.26■□□□□ 0.35
SGCE-201ENST00000265735 PER1O15534 1290 aaPredicted RBP17.26■□□□□ 0.35
SGCE-201ENST00000265735 RRS1Q15050 365 aaKnown RBP17.26■□□□□ 0.35
SGCE-201ENST00000265735 KRT27Q7Z3Y8 459 aa17.26■□□□□ 0.35
SGCE-201ENST00000265735 MAP2P11137 1827 aaKnown RBP17.26■□□□□ 0.35
SGCE-201ENST00000265735 AMPHP49418 695 aa17.26■□□□□ 0.35
SGCE-201ENST00000265735 ANKRD24Q8TF21 1146 aa17.26■□□□□ 0.35
SGCE-201ENST00000265735 PEAK1Q9H792 1746 aa17.26■□□□□ 0.35
SGCE-201ENST00000265735 FAM208AQ9UK61 1670 aaKnown RBP17.26■□□□□ 0.35
SGCE-201ENST00000265735 A0A0G2JS52 829 aa17.25■□□□□ 0.35
SGCE-201ENST00000265735 CSB-PGBD3P0DP91 1061 aa17.25■□□□□ 0.35
SGCE-201ENST00000265735 MYT1Q01538 1121 aa17.25■□□□□ 0.35
SGCE-201ENST00000265735 AMER1Q5JTC6 1135 aaPredicted RBP17.24■□□□□ 0.35
SGCE-201ENST00000265735 KNSTRNQ9Y448 316 aa17.24■□□□□ 0.35
SGCE-201ENST00000265735 DISP2A7MBM2 1401 aa17.23■□□□□ 0.35
SGCE-201ENST00000265735 ANP32CO43423 234 aa17.23■□□□□ 0.35
SGCE-201ENST00000265735 FLT4P35916 1363 aa17.22■□□□□ 0.35
SGCE-201ENST00000265735 LRRC37A3O60309 1634 aa17.22■□□□□ 0.35
SGCE-201ENST00000265735 CDCA7Q9BWT1 371 aaPredicted RBP17.22■□□□□ 0.35
SGCE-201ENST00000265735 INSRP06213 1382 aa17.22■□□□□ 0.35
SGCE-201ENST00000265735 YTHDC1Q96MU7 727 aaKnown RBP17.21■□□□□ 0.35
SGCE-201ENST00000265735 POLKQ9UBT6 870 aa17.21■□□□□ 0.35
SGCE-201ENST00000265735 EMILIN1Q9Y6C2 1016 aa17.21■□□□□ 0.35
SGCE-201ENST00000265735 RGPD2P0DJD1 1756 aa17.21■□□□□ 0.35
SGCE-201ENST00000265735 HSP90AB2PQ58FF8 381 aa17.2■□□□□ 0.34
SGCE-201ENST00000265735 CCDC125Q86Z20 511 aa17.2■□□□□ 0.34
SGCE-201ENST00000265735 NLRP2Q9NX02 1062 aa17.2■□□□□ 0.34
SGCE-201ENST00000265735 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
SGCE-201ENST00000265735 PDE3BQ13370 1112 aa17.18■□□□□ 0.34
SGCE-201ENST00000265735 FAM182BQ5T319 152 aa17.18■□□□□ 0.34
SGCE-201ENST00000265735 NPC1L1Q9UHC9 1359 aa17.18■□□□□ 0.34
SGCE-201ENST00000265735 DDB1Q16531 1140 aa17.17■□□□□ 0.34
SGCE-201ENST00000265735 MORC1Q86VD1 984 aa17.17■□□□□ 0.34
SGCE-201ENST00000265735 SMG6Q86US8 1419 aaKnown RBP17.17■□□□□ 0.34
SGCE-201ENST00000265735 CCER2I3L3R5 266 aa17.16■□□□□ 0.34
SGCE-201ENST00000265735 IL2RBP14784 551 aa17.16■□□□□ 0.34
SGCE-201ENST00000265735 TNNT2P45379 298 aaPredicted RBP17.16■□□□□ 0.34
SGCE-201ENST00000265735 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
SGCE-201ENST00000265735 FAM196AQ6ZSG2 479 aa17.16■□□□□ 0.34
SGCE-201ENST00000265735 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
SGCE-201ENST00000265735 PPM1GO15355 546 aaPredicted RBP17.14■□□□□ 0.33
SGCE-201ENST00000265735 TNS2Q63HR2 1409 aa17.14■□□□□ 0.33
SGCE-201ENST00000265735 EXOC5O00471 708 aa17.13■□□□□ 0.33
SGCE-201ENST00000265735 MSH5O43196 834 aa17.13■□□□□ 0.33
SGCE-201ENST00000265735 RGPD1P0DJD0 1748 aa17.13■□□□□ 0.33
SGCE-201ENST00000265735 NCAPD2Q15021 1401 aa17.13■□□□□ 0.33
SGCE-201ENST00000265735 OVOS2A0A0G2JMS6 1433 aa17.12■□□□□ 0.33
SGCE-201ENST00000265735 BCL9O00512 1426 aa17.12■□□□□ 0.33
SGCE-201ENST00000265735 MARCH10Q8NA82 808 aaPredicted RBP17.12■□□□□ 0.33
SGCE-201ENST00000265735 TNS1Q9HBL0 1735 aaKnown RBP17.12■□□□□ 0.33
SGCE-201ENST00000265735 SBF2Q86WG5 1849 aa17.11■□□□□ 0.33
SGCE-201ENST00000265735 CC2D1BQ5T0F9 858 aaKnown RBP17.11■□□□□ 0.33
SGCE-201ENST00000265735 MEGF6O75095 1541 aa17.09■□□□□ 0.33
SGCE-201ENST00000265735 EIF4A2Q14240 407 aaKnown RBP17.09■□□□□ 0.33
SGCE-201ENST00000265735 SHANK3Q9BYB0 1731 aa17.09■□□□□ 0.33
SGCE-201ENST00000265735 USHBP1Q8N6Y0 703 aa17.08■□□□□ 0.32
SGCE-201ENST00000265735 EYA1Q99502 592 aa17.08■□□□□ 0.32
SGCE-201ENST00000265735 TRIM37O94972 964 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms