RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 CASQ1P31415 396 aa17.6■□□□□ 0.41
AFF4-201ENST00000265343 CCDC27Q2M243 656 aa17.6■□□□□ 0.41
AFF4-201ENST00000265343 CEP63Q96MT8 703 aa17.6■□□□□ 0.41
AFF4-201ENST00000265343 BCL11BQ9C0K0 894 aaPredicted RBP17.6■□□□□ 0.41
AFF4-201ENST00000265343 WASHC2AQ641Q2 1341 aa17.6■□□□□ 0.41
AFF4-201ENST00000265343 WASHC2CQ9Y4E1 1318 aa17.6■□□□□ 0.41
AFF4-201ENST00000265343 RRBP1Q9P2E9 1410 aaKnown RBP17.6■□□□□ 0.41
AFF4-201ENST00000265343 CCDC88BA6NC98 1476 aa17.6■□□□□ 0.41
AFF4-201ENST00000265343 UPF3BQ9BZI7 483 aaKnown RBP17.6■□□□□ 0.41
AFF4-201ENST00000265343 BRPF1P55201 1214 aaPredicted RBP17.59■□□□□ 0.41
AFF4-201ENST00000265343 IRX3P78415 501 aaPredicted RBP17.59■□□□□ 0.41
AFF4-201ENST00000265343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.59■□□□□ 0.41
AFF4-201ENST00000265343 APAF1O14727 1248 aa17.59■□□□□ 0.41
AFF4-201ENST00000265343 GNAI3P08754 354 aa17.59■□□□□ 0.41
AFF4-201ENST00000265343 TRIM22Q8IYM9 498 aa17.59■□□□□ 0.41
AFF4-201ENST00000265343 GTF2A1P52655 376 aaPredicted RBP17.59■□□□□ 0.41
AFF4-201ENST00000265343 GSDMDP57764 484 aa17.59■□□□□ 0.41
AFF4-201ENST00000265343 CCDC175P0C221 793 aa17.59■□□□□ 0.41
AFF4-201ENST00000265343 RIPK4P57078 832 aa17.59■□□□□ 0.41
AFF4-201ENST00000265343 DIAPH1O60610 1272 aaKnown RBP17.58■□□□□ 0.41
AFF4-201ENST00000265343 TAF4BQ92750 862 aa17.58■□□□□ 0.4
AFF4-201ENST00000265343 UBTFL1P0CB47 393 aaPredicted RBP17.58■□□□□ 0.4
AFF4-201ENST00000265343 EID1Q9Y6B2 187 aa17.58■□□□□ 0.4
AFF4-201ENST00000265343 GPATCH11Q8N954 259 aa17.57■□□□□ 0.4
AFF4-201ENST00000265343 CCDC183Q5T5S1 534 aa17.57■□□□□ 0.4
AFF4-201ENST00000265343 EFCAB2Q5VUJ9 269 aa17.57■□□□□ 0.4
AFF4-201ENST00000265343 WWC2Q6AWC2 1192 aa17.57■□□□□ 0.4
AFF4-201ENST00000265343 GTPBP4Q9BZE4 634 aaKnown RBP17.57■□□□□ 0.4
AFF4-201ENST00000265343 CETN2P41208 172 aa17.56■□□□□ 0.4
AFF4-201ENST00000265343 SPATA32Q96LK8 384 aa17.56■□□□□ 0.4
AFF4-201ENST00000265343 MNAT1P51948 309 aa17.56■□□□□ 0.4
AFF4-201ENST00000265343 DNAAF4Q8WXU2 420 aa17.56■□□□□ 0.4
AFF4-201ENST00000265343 ZSCAN31Q96LW9 406 aaPredicted RBP17.56■□□□□ 0.4
AFF4-201ENST00000265343 TAOK3Q9H2K8 898 aa17.56■□□□□ 0.4
AFF4-201ENST00000265343 KIF21BO75037 1637 aa17.55■□□□□ 0.4
AFF4-201ENST00000265343 CTAGE5O15320 804 aa17.55■□□□□ 0.4
AFF4-201ENST00000265343 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
AFF4-201ENST00000265343 TBC1D2BQ9UPU7 963 aa17.55■□□□□ 0.4
AFF4-201ENST00000265343 KRT222Q8N1A0 295 aa17.55■□□□□ 0.4
AFF4-201ENST00000265343 NAA15Q9BXJ9 866 aaKnown RBP17.55■□□□□ 0.4
AFF4-201ENST00000265343 ANKRD18BA2A2Z9 1011 aa17.55■□□□□ 0.4
AFF4-201ENST00000265343 CBX1P83916 185 aa17.55■□□□□ 0.4
AFF4-201ENST00000265343 C6orf163Q5TEZ5 329 aa17.55■□□□□ 0.4
AFF4-201ENST00000265343 BMS1Q14692 1282 aaKnown RBP17.54■□□□□ 0.4
AFF4-201ENST00000265343 VPS36Q86VN1 386 aa17.54■□□□□ 0.4
AFF4-201ENST00000265343 DDX12PQ92771 950 aa17.54■□□□□ 0.4
AFF4-201ENST00000265343 SSR1P43307 286 aaKnown RBP17.54■□□□□ 0.4
AFF4-201ENST00000265343 PANK1Q8TE04 598 aa17.54■□□□□ 0.4
AFF4-201ENST00000265343 FSD1Q9BTV5 496 aa17.53■□□□□ 0.4
AFF4-201ENST00000265343 FOSBP53539 338 aa17.53■□□□□ 0.4
AFF4-201ENST00000265343 TICAM2Q86XR7 235 aa17.53■□□□□ 0.4
AFF4-201ENST00000265343 KRT32Q14532 448 aa17.53■□□□□ 0.4
AFF4-201ENST00000265343 ZMYND15Q9H091 742 aa17.53■□□□□ 0.4
AFF4-201ENST00000265343 FAM177A1Q8N128 213 aaPredicted RBP17.53■□□□□ 0.4
AFF4-201ENST00000265343 CCDC9Q9Y3X0 531 aaKnown RBP17.53■□□□□ 0.4
AFF4-201ENST00000265343 SPA17Q15506 151 aa17.53■□□□□ 0.4
AFF4-201ENST00000265343 BBXQ8WY36 941 aaPredicted RBP17.53■□□□□ 0.4
AFF4-201ENST00000265343 ANKS4BQ8N8V4 417 aa17.53■□□□□ 0.4
AFF4-201ENST00000265343 CEP131Q9UPN4 1083 aa17.53■□□□□ 0.4
AFF4-201ENST00000265343 KRT18P05783 430 aaKnown RBP17.52■□□□□ 0.4
AFF4-201ENST00000265343 PPP4R3BQ5MIZ7 849 aa17.52■□□□□ 0.4
AFF4-201ENST00000265343 EHBP1Q8NDI1 1231 aa17.52■□□□□ 0.4
AFF4-201ENST00000265343 LARP1BQ659C4 914 aaKnown RBP17.52■□□□□ 0.39
AFF4-201ENST00000265343 HSPA4P34932 840 aa17.52■□□□□ 0.39
AFF4-201ENST00000265343 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
AFF4-201ENST00000265343 WASF1Q92558 559 aa17.51■□□□□ 0.39
AFF4-201ENST00000265343 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.51■□□□□ 0.394e-7■■■□□ 16.7
AFF4-201ENST00000265343 TUBB4AP04350 444 aa17.51■□□□□ 0.39
AFF4-201ENST00000265343 IFFO1Q0D2I5 559 aa17.51■□□□□ 0.39
AFF4-201ENST00000265343 PPP1R12BO60237 982 aaPredicted RBP17.51■□□□□ 0.39
AFF4-201ENST00000265343 TRIM21P19474 475 aaKnown RBP17.51■□□□□ 0.39
AFF4-201ENST00000265343 SMARCC1Q92922 1105 aaPredicted RBP17.51■□□□□ 0.39
AFF4-201ENST00000265343 NOL7Q9UMY1 257 aaKnown RBP17.51■□□□□ 0.39
AFF4-201ENST00000265343 SCAND2PQ9GZW5 306 aaPredicted RBP17.51■□□□□ 0.39
AFF4-201ENST00000265343 AKNAQ7Z591 1439 aa17.5■□□□□ 0.39
AFF4-201ENST00000265343 VGFO15240 615 aaPredicted RBP17.5■□□□□ 0.39
AFF4-201ENST00000265343 SETSIPP0DME0 302 aa17.5■□□□□ 0.39
AFF4-201ENST00000265343 SYCE3A1L190 88 aa17.5■□□□□ 0.39
AFF4-201ENST00000265343 GGT6Q6P531 493 aa17.5■□□□□ 0.39
AFF4-201ENST00000265343 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.5■□□□□ 0.39
AFF4-201ENST00000265343 V9GYY5 206 aaPredicted RBP17.5■□□□□ 0.39
AFF4-201ENST00000265343 POTEJP0CG39 1038 aa17.5■□□□□ 0.39
AFF4-201ENST00000265343 SEPT6Q14141 434 aa17.5■□□□□ 0.39
AFF4-201ENST00000265343 RAD21O60216 631 aa17.5■□□□□ 0.39
AFF4-201ENST00000265343 CFAP100Q494V2 611 aa17.5■□□□□ 0.39
AFF4-201ENST00000265343 ANO10Q9NW15 660 aa17.49■□□□□ 0.39
AFF4-201ENST00000265343 FGFR1OPO95684 399 aaKnown RBP17.49■□□□□ 0.39
AFF4-201ENST00000265343 WASHC4Q2M389 1173 aa17.49■□□□□ 0.39
AFF4-201ENST00000265343 WDR66Q8TBY9 1149 aa17.49■□□□□ 0.39
AFF4-201ENST00000265343 ELL2O00472 640 aaPredicted RBP17.49■□□□□ 0.39
AFF4-201ENST00000265343 IPO4Q8TEX9 1081 aaKnown RBP17.49■□□□□ 0.39
AFF4-201ENST00000265343 BMP2KQ9NSY1 1161 aaPredicted RBP17.49■□□□□ 0.39
AFF4-201ENST00000265343 CPSF2Q9P2I0 782 aaKnown RBP17.48■□□□□ 0.39
AFF4-201ENST00000265343 PRDM10Q9NQV6 1147 aa17.48■□□□□ 0.39
AFF4-201ENST00000265343 CCDC171Q6TFL3 1326 aa17.48■□□□□ 0.39
AFF4-201ENST00000265343 RNF187Q5TA31 235 aaPredicted RBP17.47■□□□□ 0.39
AFF4-201ENST00000265343 ALS2CR12Q96Q35 445 aa17.47■□□□□ 0.39
AFF4-201ENST00000265343 DNAI2Q9GZS0 605 aa17.47■□□□□ 0.39
AFF4-201ENST00000265343 DHX29Q7Z478 1369 aaKnown RBP17.47■□□□□ 0.39
AFF4-201ENST00000265343 GNAI2P04899 355 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms