RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ADAMTS2O95450 1211 aa19.36■□□□□ 0.69
SSBP1-201ENST00000265304 PPP2R1AP30153 589 aa19.36■□□□□ 0.69
SSBP1-201ENST00000265304 RRS1Q15050 365 aaKnown RBP19.36■□□□□ 0.69
SSBP1-201ENST00000265304 AXIN2Q9Y2T1 843 aa19.36■□□□□ 0.69
SSBP1-201ENST00000265304 HOXC9P31274 260 aa19.35■□□□□ 0.69
SSBP1-201ENST00000265304 EMILIN1Q9Y6C2 1016 aa19.35■□□□□ 0.69
SSBP1-201ENST00000265304 MSH5O43196 834 aa19.34■□□□□ 0.69
SSBP1-201ENST00000265304 FAM208AQ9UK61 1670 aaKnown RBP19.33■□□□□ 0.69
SSBP1-201ENST00000265304 MTHFSP49914 203 aa19.33■□□□□ 0.68
SSBP1-201ENST00000265304 COL5A2P05997 1499 aaPredicted RBP19.33■□□□□ 0.68
SSBP1-201ENST00000265304 MYBBP1AQ9BQG0 1328 aaKnown RBP19.32■□□□□ 0.68
SSBP1-201ENST00000265304 SOX12O15370 315 aa19.32■□□□□ 0.68
SSBP1-201ENST00000265304 TNNT2P45379 298 aaPredicted RBP19.32■□□□□ 0.68
SSBP1-201ENST00000265304 CHRNA2Q15822 529 aa19.32■□□□□ 0.68
SSBP1-201ENST00000265304 NGLY1Q96IV0 654 aa19.32■□□□□ 0.68
SSBP1-201ENST00000265304 COL3A1P02461 1466 aaPredicted RBP19.31■□□□□ 0.68
SSBP1-201ENST00000265304 AMPHP49418 695 aa19.31■□□□□ 0.68
SSBP1-201ENST00000265304 ERBB3P21860 1342 aa19.3■□□□□ 0.68
SSBP1-201ENST00000265304 PLEKHG5O94827 1062 aa19.3■□□□□ 0.68
SSBP1-201ENST00000265304 HSP90AB2PQ58FF8 381 aa19.3■□□□□ 0.68
SSBP1-201ENST00000265304 UNC5CLQ8IV45 518 aa19.3■□□□□ 0.68
SSBP1-201ENST00000265304 C8orf37Q96NL8 207 aa19.3■□□□□ 0.68
SSBP1-201ENST00000265304 BTG4Q9NY30 223 aa19.3■□□□□ 0.68
SSBP1-201ENST00000265304 NCAPD2Q15021 1401 aa19.29■□□□□ 0.68
SSBP1-201ENST00000265304 AFF2P51816 1311 aa19.28■□□□□ 0.68
SSBP1-201ENST00000265304 ANP32CO43423 234 aa19.28■□□□□ 0.68
SSBP1-201ENST00000265304 MEX3CQ5U5Q3 659 aaKnown RBP19.28■□□□□ 0.68
SSBP1-201ENST00000265304 DIEXFQ68CQ4 756 aaKnown RBP19.28■□□□□ 0.68
SSBP1-201ENST00000265304 RGPD1P0DJD0 1748 aa19.28■□□□□ 0.68
SSBP1-201ENST00000265304 WDR17Q8IZU2 1322 aa19.27■□□□□ 0.68
SSBP1-201ENST00000265304 RGPD2P0DJD1 1756 aa19.27■□□□□ 0.68
SSBP1-201ENST00000265304 VPS72Q15906 364 aa19.27■□□□□ 0.68
SSBP1-201ENST00000265304 ATRNO75882 1429 aa19.26■□□□□ 0.67
SSBP1-201ENST00000265304 RGS17Q9UGC6 210 aaPredicted RBP19.26■□□□□ 0.67
SSBP1-201ENST00000265304 IL13P35225 146 aa19.25■□□□□ 0.67
SSBP1-201ENST00000265304 ZNF772Q68DY9 489 aaPredicted RBP19.25■□□□□ 0.67
SSBP1-201ENST00000265304 USP21Q9UK80 565 aa19.25■□□□□ 0.67
SSBP1-201ENST00000265304 CRB1P82279 1406 aa19.25■□□□□ 0.67
SSBP1-201ENST00000265304 EIF4A2Q14240 407 aaKnown RBP19.24■□□□□ 0.67
SSBP1-201ENST00000265304 PIAS4Q8N2W9 510 aaPredicted RBP19.24■□□□□ 0.67
SSBP1-201ENST00000265304 ANKRD24Q8TF21 1146 aa19.24■□□□□ 0.67
SSBP1-201ENST00000265304 CARD10Q9BWT7 1032 aa19.24■□□□□ 0.67
SSBP1-201ENST00000265304 SPATA31A5Q5VU36 1347 aa19.24■□□□□ 0.67
SSBP1-201ENST00000265304 SPATA31A7Q8IWB4 1347 aa19.24■□□□□ 0.67
SSBP1-201ENST00000265304 PPM1GO15355 546 aaPredicted RBP19.22■□□□□ 0.67
SSBP1-201ENST00000265304 ONECUT3O60422 494 aaPredicted RBP19.22■□□□□ 0.67
SSBP1-201ENST00000265304 CNGB1Q14028 1251 aaPredicted RBP19.22■□□□□ 0.67
SSBP1-201ENST00000265304 TRPC5Q9UL62 973 aaPredicted RBP19.22■□□□□ 0.67
SSBP1-201ENST00000265304 SPATA31A1Q5TZJ5 1347 aa19.22■□□□□ 0.67
SSBP1-201ENST00000265304 PLEKHG2Q9H7P9 1386 aa19.21■□□□□ 0.67
SSBP1-201ENST00000265304 EVA1CP58658 441 aa19.21■□□□□ 0.67
SSBP1-201ENST00000265304 LARP1Q6PKG0 1096 aaKnown RBP19.21■□□□□ 0.67
SSBP1-201ENST00000265304 CFAP53Q96M91 514 aa19.21■□□□□ 0.67
SSBP1-201ENST00000265304 IGSF1Q8N6C5 1336 aa19.21■□□□□ 0.67
SSBP1-201ENST00000265304 KDRP35968 1356 aa19.2■□□□□ 0.66
SSBP1-201ENST00000265304 ZBTB7CA1YPR0 619 aa19.2■□□□□ 0.66
SSBP1-201ENST00000265304 DIAPH1O60610 1272 aaKnown RBP19.2■□□□□ 0.66
SSBP1-201ENST00000265304 THRAP3Q9Y2W1 955 aaKnown RBP19.2■□□□□ 0.66
SSBP1-201ENST00000265304 GLI3P10071 1580 aa19.19■□□□□ 0.66
SSBP1-201ENST00000265304 WNK3Q9BYP7 1800 aa19.19■□□□□ 0.66
SSBP1-201ENST00000265304 ADRA2BP18089 450 aa19.19■□□□□ 0.66
SSBP1-201ENST00000265304 NBPF6Q5VWK0 638 aa19.19■□□□□ 0.66
SSBP1-201ENST00000265304 BARGINQ6ZT62 677 aa19.19■□□□□ 0.66
SSBP1-201ENST00000265304 NBPF4Q96M43 638 aa19.19■□□□□ 0.66
SSBP1-201ENST00000265304 EYA1Q99502 592 aa19.19■□□□□ 0.66
SSBP1-201ENST00000265304 QTRT2Q9H974 415 aaKnown RBP19.19■□□□□ 0.66
SSBP1-201ENST00000265304 GJD4Q96KN9 370 aaPredicted RBP19.18■□□□□ 0.66
SSBP1-201ENST00000265304 CCER2I3L3R5 266 aa19.17■□□□□ 0.66
SSBP1-201ENST00000265304 STRN4Q9NRL3 753 aa19.17■□□□□ 0.66
SSBP1-201ENST00000265304 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
SSBP1-201ENST00000265304 TOM1L2Q6ZVM7 507 aa19.16■□□□□ 0.66
SSBP1-201ENST00000265304 THSD7AQ9UPZ6 1657 aa19.15■□□□□ 0.66
SSBP1-201ENST00000265304 TCP11L2Q8N4U5 519 aa19.15■□□□□ 0.66
SSBP1-201ENST00000265304 RBM6P78332 1123 aaKnown RBP19.14■□□□□ 0.65
SSBP1-201ENST00000265304 CCDC184Q52MB2 194 aa19.14■□□□□ 0.65
SSBP1-201ENST00000265304 POTEAQ6S8J7 498 aa19.14■□□□□ 0.65
SSBP1-201ENST00000265304 LTV1Q96GA3 475 aaPredicted RBP19.14■□□□□ 0.65
SSBP1-201ENST00000265304 CDCA7Q9BWT1 371 aaPredicted RBP19.14■□□□□ 0.65
SSBP1-201ENST00000265304 NLRP2Q9NX02 1062 aa19.14■□□□□ 0.65
SSBP1-201ENST00000265304 NUDCQ9Y266 331 aa19.14■□□□□ 0.65
SSBP1-201ENST00000265304 PARP4Q9UKK3 1724 aaKnown RBP19.14■□□□□ 0.65
SSBP1-201ENST00000265304 CSB-PGBD3P0DP91 1061 aa19.13■□□□□ 0.65
SSBP1-201ENST00000265304 PNISRQ8TF01 805 aaKnown RBP19.13■□□□□ 0.65
SSBP1-201ENST00000265304 FCHSD2O94868 740 aa19.11■□□□□ 0.65
SSBP1-201ENST00000265304 MIER1Q8N108 512 aa19.11■□□□□ 0.65
SSBP1-201ENST00000265304 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.11■□□□□ 0.652e-7■■□□□ 12.8
SSBP1-201ENST00000265304 PKD1L3Q7Z443 1732 aa19.11■□□□□ 0.65
SSBP1-201ENST00000265304 OVOS2A0A0G2JMS6 1433 aa19.08■□□□□ 0.65
SSBP1-201ENST00000265304 IL2RBP14784 551 aa19.08■□□□□ 0.64
SSBP1-201ENST00000265304 RXRBP28702 533 aa19.08■□□□□ 0.64
SSBP1-201ENST00000265304 RSPH6AQ9H0K4 717 aa19.08■□□□□ 0.64
SSBP1-201ENST00000265304 MEGF6O75095 1541 aa19.07■□□□□ 0.64
SSBP1-201ENST00000265304 SULT6B1Q6IMI4 303 aa19.07■□□□□ 0.64
SSBP1-201ENST00000265304 AEBP1Q8IUX7 1158 aa19.07■□□□□ 0.64
SSBP1-201ENST00000265304 MRS2Q9HD23 443 aa19.07■□□□□ 0.64
SSBP1-201ENST00000265304 SHANK3Q9BYB0 1731 aa19.07■□□□□ 0.64
SSBP1-201ENST00000265304 BRWD3Q6RI45 1802 aa19.07■□□□□ 0.64
SSBP1-201ENST00000265304 LRRC37A3O60309 1634 aa19.05■□□□□ 0.64
SSBP1-201ENST00000265304 U2AF1L5P0DN76 240 aaPredicted RBP19.05■□□□□ 0.64
SSBP1-201ENST00000265304 U2AF1Q01081 240 aaKnown RBP eCLIP19.05■□□□□ 0.641e-7■■■■■ 28.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms