RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 JAKMIP3Q5VZ66 844 aa8.03□□□□□ -1.12
PDGFRA-201ENST00000257290 FRMD4BQ9Y2L6 1034 aa8.03□□□□□ -1.12
PDGFRA-201ENST00000257290 TPD52L1Q16890 204 aaPredicted RBP8.03□□□□□ -1.12
PDGFRA-201ENST00000257290 TMCO3Q6UWJ1 677 aa8.03□□□□□ -1.12
PDGFRA-201ENST00000257290 CENPQQ7L2Z9 268 aaPredicted RBP8.03□□□□□ -1.12
PDGFRA-201ENST00000257290 CCDC144AA2RUR9 1427 aa8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 ZKSCAN8Q15776 578 aaPredicted RBP8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 THOC2Q8NI27 1593 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 RCAN3Q9UKA8 241 aa8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 JRKLQ9Y4A0 524 aa8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 ERCC3P19447 782 aa8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 SEMA3FQ13275 785 aa8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 CCDC181Q5TID7 509 aa8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 MICALCLQ6ZW33 695 aa8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 CCAR2Q8N163 923 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 SUFUQ9UMX1 484 aa8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 EZRP15311 586 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 GCKP35557 465 aa8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 ZMAT2Q96NC0 199 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-201ENST00000257290 SMC2O95347 1197 aa8.01□□□□□ -1.13
PDGFRA-201ENST00000257290 WDR63Q8IWG1 891 aa8.01□□□□□ -1.13
PDGFRA-201ENST00000257290 L3MBTL2Q969R5 705 aa8.01□□□□□ -1.13
PDGFRA-201ENST00000257290 ZNF608Q9ULD9 1512 aaPredicted RBP8.01□□□□□ -1.13
PDGFRA-201ENST00000257290 PPP1R12AO14974 1030 aaPredicted RBP8□□□□□ -1.13
PDGFRA-201ENST00000257290 IPO8O15397 1037 aaKnown RBP8□□□□□ -1.13
PDGFRA-201ENST00000257290 MAFGO15525 162 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 MICALL1Q8N3F8 863 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 MRFAP1L1Q96HT8 127 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 KIF15Q9NS87 1388 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 KIF21AQ7Z4S6 1674 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 CTTNBP2Q8WZ74 1663 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 GOLGA6L7A0A1B0GV03 622 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 TRHP20396 242 aaPredicted RBP8□□□□□ -1.13
PDGFRA-201ENST00000257290 IRX1P78414 480 aaPredicted RBP8□□□□□ -1.13
PDGFRA-201ENST00000257290 ADAMTS12P58397 1594 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 ZRANB2O95218 330 aaKnown RBP eCLIP8□□□□□ -1.13
PDGFRA-201ENST00000257290 OTUD6BQ8N6M0 293 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 WDR62O43379 1518 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 POLR3GO15318 223 aaPredicted RBP8□□□□□ -1.13
PDGFRA-201ENST00000257290 CC2D2BQ6DHV5 1058 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 NGEFQ8N5V2 710 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 WDR97A6NE52 1622 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 CHRM1P11229 460 aaPredicted RBP8□□□□□ -1.13
PDGFRA-201ENST00000257290 CTAGE5O15320 804 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 TPD52L2O43399 206 aaKnown RBP8□□□□□ -1.13
PDGFRA-201ENST00000257290 ANKRD50Q9ULJ7 1429 aa8□□□□□ -1.13
PDGFRA-201ENST00000257290 SHTN1A0MZ66 631 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 NAA25Q14CX7 972 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 LRRFIP2Q9Y608 721 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 CDK13Q14004 1512 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 IBSPP21815 317 aaPredicted RBP7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 LMAN1P49257 510 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 CLNS1AP54105 237 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 MFSD4BQ5TF39 518 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 RINLQ6ZS11 566 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 EGFL6Q8IUX8 553 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 PANK2Q9BZ23 570 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 DHX16O60231 1041 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 SLC20A2Q08357 652 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 INF2Q27J81 1249 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 HOMER1Q86YM7 354 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 RSRC1Q96IZ7 334 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 UIMC1Q96RL1 719 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 V9GYY5 206 aaPredicted RBP7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 HFM1A2PYH4 1435 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 SESN3P58005 492 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 KRBA2Q6ZNG9 492 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 RASSF8Q8NHQ8 419 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 MAPK8IP3Q9UPT6 1336 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 SH3GL3Q99963 347 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 PRDM16Q9HAZ2 1276 aa7.99□□□□□ -1.13
PDGFRA-201ENST00000257290 MYRIPQ8NFW9 859 aa7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 ZKSCAN5Q9Y2L8 839 aa7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 DAPK1P53355 1430 aa7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 ZBED9Q6R2W3 1325 aa7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 ZNF644Q9H582 1327 aaPredicted RBP7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 MLECQ14165 292 aa7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 CCDC70Q6NSX1 233 aa7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 RMDN2Q96LZ7 410 aa7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 KIF14Q15058 1648 aa7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 RLBP1P12271 317 aa7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 ERC1Q8IUD2 1116 aa7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 DDX12PQ92771 950 aa7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 KTN1Q86UP2 1357 aaKnown RBP7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 CXorf56Q9H5V9 222 aa7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 DONSONQ9NYP3 566 aa7.98□□□□□ -1.13
PDGFRA-201ENST00000257290 ZBTB22O15209 634 aa7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 FAM184AQ8NB25 1140 aa7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 KIF2CQ99661 725 aa7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 ERLIN1O75477 346 aa7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 VEZTQ9HBM0 779 aa7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 CCDC92Q53HC0 331 aaPredicted RBP7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 FILIP1Q7Z7B0 1213 aa7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 CRACR2AQ9BSW2 395 aa7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 CARD10Q9BWT7 1032 aa7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 KCNG1Q9UIX4 513 aa7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 WHAMMQ8TF30 809 aa7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 TSPY26PQ9H489 355 aa7.97□□□□□ -1.13
PDGFRA-201ENST00000257290 BSDC1Q9NW68 430 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms