RNA–Protein interactions for RNA: ENST00000232508.9

CYB561D2-201, Transcript of cytochrome b561 family member D2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYB561D2, Length 1,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561D2-201ENST00000232508 POLR3GLQ9BT43 218 aa25.67■■□□□ 1.7
CYB561D2-201ENST00000232508 ANKRD26Q9UPS8 1709 aa25.66■■□□□ 1.7
CYB561D2-201ENST00000232508 LARP1Q6PKG0 1096 aaKnown RBP25.66■■□□□ 1.7
CYB561D2-201ENST00000232508 GGNBP2Q9H3C7 697 aa25.66■■□□□ 1.7
CYB561D2-201ENST00000232508 STRN4Q9NRL3 753 aa25.66■■□□□ 1.7
CYB561D2-201ENST00000232508 ZBTB7CA1YPR0 619 aa25.65■■□□□ 1.7
CYB561D2-201ENST00000232508 WNK3Q9BYP7 1800 aa25.65■■□□□ 1.7
CYB561D2-201ENST00000232508 CCDC9Q9Y3X0 531 aaKnown RBP25.64■■□□□ 1.7
CYB561D2-201ENST00000232508 COG3Q96JB2 828 aa25.63■■□□□ 1.69
CYB561D2-201ENST00000232508 CCDC7Q96M83 1385 aa25.62■■□□□ 1.69
CYB561D2-201ENST00000232508 FBLN1P23142 703 aa25.62■■□□□ 1.69
CYB561D2-201ENST00000232508 PEAK1Q9H792 1746 aa25.62■■□□□ 1.69
CYB561D2-201ENST00000232508 CRB1P82279 1406 aa25.62■■□□□ 1.69
CYB561D2-201ENST00000232508 FAM98CQ17RN3 349 aaKnown RBP25.61■■□□□ 1.69
CYB561D2-201ENST00000232508 SEPT12Q8IYM1 358 aa25.61■■□□□ 1.69
CYB561D2-201ENST00000232508 PANK3Q9H999 370 aa25.61■■□□□ 1.69
CYB561D2-201ENST00000232508 MAP3K19Q56UN5 1328 aa25.6■■□□□ 1.69
CYB561D2-201ENST00000232508 WASHC2AQ641Q2 1341 aa25.6■■□□□ 1.69
CYB561D2-201ENST00000232508 WDR17Q8IZU2 1322 aa25.6■■□□□ 1.69
CYB561D2-201ENST00000232508 EVA1CP58658 441 aa25.58■■□□□ 1.69
CYB561D2-201ENST00000232508 PARP4Q9UKK3 1724 aaKnown RBP25.57■■□□□ 1.68
CYB561D2-201ENST00000232508 ERBB3P21860 1342 aa25.57■■□□□ 1.68
CYB561D2-201ENST00000232508 CGNL1Q0VF96 1302 aa25.57■■□□□ 1.68
CYB561D2-201ENST00000232508 BLMP54132 1417 aaPredicted RBP25.56■■□□□ 1.68
CYB561D2-201ENST00000232508 BARGINQ6ZT62 677 aa25.56■■□□□ 1.68
CYB561D2-201ENST00000232508 LRRC37A3O60309 1634 aa25.55■■□□□ 1.68
CYB561D2-201ENST00000232508 RTL1A6NKG5 1358 aa25.55■■□□□ 1.68
CYB561D2-201ENST00000232508 EP400Q96L91 3159 aa25.54■■□□□ 1.68
CYB561D2-201ENST00000232508 TCP11L2Q8N4U5 519 aa25.54■■□□□ 1.68
CYB561D2-201ENST00000232508 UPF1Q92900 1129 aaKnown RBP eCLIP25.54■■□□□ 1.68
CYB561D2-201ENST00000232508 FAM208AQ9UK61 1670 aaKnown RBP25.54■■□□□ 1.68
CYB561D2-201ENST00000232508 DISP2A7MBM2 1401 aa25.54■■□□□ 1.68
CYB561D2-201ENST00000232508 RRS1Q15050 365 aaKnown RBP25.53■■□□□ 1.68
CYB561D2-201ENST00000232508 IP6K1Q92551 441 aa25.53■■□□□ 1.68
CYB561D2-201ENST00000232508 USP35Q9P2H5 1018 aa25.53■■□□□ 1.68
CYB561D2-201ENST00000232508 THRAP3Q9Y2W1 955 aaKnown RBP25.51■■□□□ 1.67
CYB561D2-201ENST00000232508 NSD2O96028 1365 aa25.5■■□□□ 1.67
CYB561D2-201ENST00000232508 RGPD2P0DJD1 1756 aa25.5■■□□□ 1.67
CYB561D2-201ENST00000232508 HOXC9P31274 260 aa25.5■■□□□ 1.67
CYB561D2-201ENST00000232508 MAP2P11137 1827 aaKnown RBP25.49■■□□□ 1.67
CYB561D2-201ENST00000232508 TOM1L2Q6ZVM7 507 aa25.49■■□□□ 1.67
CYB561D2-201ENST00000232508 CARD10Q9BWT7 1032 aa25.49■■□□□ 1.67
CYB561D2-201ENST00000232508 PER1O15534 1290 aaPredicted RBP25.48■■□□□ 1.67
CYB561D2-201ENST00000232508 AMER1Q5JTC6 1135 aaPredicted RBP25.48■■□□□ 1.67
CYB561D2-201ENST00000232508 KRT27Q7Z3Y8 459 aa25.48■■□□□ 1.67
CYB561D2-201ENST00000232508 ANKRD24Q8TF21 1146 aa25.48■■□□□ 1.67
CYB561D2-201ENST00000232508 KIF24Q5T7B8 1368 aa25.46■■□□□ 1.67
CYB561D2-201ENST00000232508 EMILIN1Q9Y6C2 1016 aa25.46■■□□□ 1.67
CYB561D2-201ENST00000232508 A0A0G2JS52 829 aa25.45■■□□□ 1.66
CYB561D2-201ENST00000232508 CSB-PGBD3P0DP91 1061 aa25.45■■□□□ 1.66
CYB561D2-201ENST00000232508 MYT1Q01538 1121 aa25.45■■□□□ 1.66
CYB561D2-201ENST00000232508 SMG6Q86US8 1419 aaKnown RBP25.45■■□□□ 1.66
CYB561D2-201ENST00000232508 FLT4P35916 1363 aa25.44■■□□□ 1.66
CYB561D2-201ENST00000232508 AMPHP49418 695 aa25.44■■□□□ 1.66
CYB561D2-201ENST00000232508 INSRP06213 1382 aa25.44■■□□□ 1.66
CYB561D2-201ENST00000232508 FAM182BQ5T319 152 aa25.41■■□□□ 1.66
CYB561D2-201ENST00000232508 POLKQ9UBT6 870 aa25.41■■□□□ 1.66
CYB561D2-201ENST00000232508 KNSTRNQ9Y448 316 aa25.41■■□□□ 1.66
CYB561D2-201ENST00000232508 HSP90AB2PQ58FF8 381 aa25.4■■□□□ 1.66
CYB561D2-201ENST00000232508 TNS1Q9HBL0 1735 aaKnown RBP25.4■■□□□ 1.66
CYB561D2-201ENST00000232508 LTV1Q96GA3 475 aaPredicted RBP25.39■■□□□ 1.66
CYB561D2-201ENST00000232508 NLRP2Q9NX02 1062 aa25.39■■□□□ 1.66
CYB561D2-201ENST00000232508 NCAPD2Q15021 1401 aa25.38■■□□□ 1.65
CYB561D2-201ENST00000232508 TNS2Q63HR2 1409 aa25.38■■□□□ 1.65
CYB561D2-201ENST00000232508 NPC1L1Q9UHC9 1359 aa25.38■■□□□ 1.65
CYB561D2-201ENST00000232508 RGPD1P0DJD0 1748 aa25.36■■□□□ 1.65
CYB561D2-201ENST00000232508 SHANK3Q9BYB0 1731 aa25.36■■□□□ 1.65
CYB561D2-201ENST00000232508 TNNT2P45379 298 aaPredicted RBP25.35■■□□□ 1.65
CYB561D2-201ENST00000232508 CDCA7Q9BWT1 371 aaPredicted RBP25.35■■□□□ 1.65
CYB561D2-201ENST00000232508 MEGF6O75095 1541 aa25.35■■□□□ 1.65
CYB561D2-201ENST00000232508 SBF2Q86WG5 1849 aa25.33■■□□□ 1.65
CYB561D2-201ENST00000232508 NBPF6Q5VWK0 638 aa25.33■■□□□ 1.65
CYB561D2-201ENST00000232508 MORC1Q86VD1 984 aa25.33■■□□□ 1.65
CYB561D2-201ENST00000232508 NBPF4Q96M43 638 aa25.33■■□□□ 1.65
CYB561D2-201ENST00000232508 DDB1Q16531 1140 aa25.32■■□□□ 1.64
CYB561D2-201ENST00000232508 MARCH10Q8NA82 808 aaPredicted RBP25.31■■□□□ 1.64
CYB561D2-201ENST00000232508 OVOS2A0A0G2JMS6 1433 aa25.3■■□□□ 1.64
CYB561D2-201ENST00000232508 BCL9O00512 1426 aa25.3■■□□□ 1.64
CYB561D2-201ENST00000232508 IL2RBP14784 551 aa25.3■■□□□ 1.64
CYB561D2-201ENST00000232508 PDE3BQ13370 1112 aa25.3■■□□□ 1.64
CYB561D2-201ENST00000232508 PPM1GO15355 546 aaPredicted RBP25.28■■□□□ 1.64
CYB561D2-201ENST00000232508 ZEB1P37275 1124 aaPredicted RBP25.28■■□□□ 1.64
CYB561D2-201ENST00000232508 FAM196AQ6ZSG2 479 aa25.28■■□□□ 1.64
CYB561D2-201ENST00000232508 CCDC125Q86Z20 511 aa25.28■■□□□ 1.64
CYB561D2-201ENST00000232508 USHBP1Q8N6Y0 703 aa25.28■■□□□ 1.64
CYB561D2-201ENST00000232508 CC2D1BQ5T0F9 858 aaKnown RBP25.27■■□□□ 1.64
CYB561D2-201ENST00000232508 PKD1L3Q7Z443 1732 aa25.26■■□□□ 1.63
CYB561D2-201ENST00000232508 EIF4A2Q14240 407 aaKnown RBP25.25■■□□□ 1.63
CYB561D2-201ENST00000232508 EXOC5O00471 708 aa25.23■■□□□ 1.63
CYB561D2-201ENST00000232508 DEFB132Q7Z7B7 95 aa25.23■■□□□ 1.63
CYB561D2-201ENST00000232508 EYA1Q99502 592 aa25.23■■□□□ 1.63
CYB561D2-201ENST00000232508 COL3A1P02461 1466 aaPredicted RBP25.22■■□□□ 1.63
CYB561D2-201ENST00000232508 NHSQ6T4R5 1651 aa25.22■■□□□ 1.63
CYB561D2-201ENST00000232508 TRIM37O94972 964 aa25.21■■□□□ 1.63
CYB561D2-201ENST00000232508 PTF1AQ7RTS3 328 aa25.2■■□□□ 1.62
CYB561D2-201ENST00000232508 IGSF1Q8N6C5 1336 aa25.19■■□□□ 1.62
CYB561D2-201ENST00000232508 RREB1Q92766 1687 aa25.17■■□□□ 1.62
CYB561D2-201ENST00000232508 MTHFSP49914 203 aa25.17■■□□□ 1.62
CYB561D2-201ENST00000232508 RGPD3A6NKT7 1758 aaPredicted RBP25.17■■□□□ 1.62
CYB561D2-201ENST00000232508 RGPD4Q7Z3J3 1758 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms