RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 NPC1L1Q9UHC9 1359 aa27■■□□□ 1.91
HOXA6-201ENST00000222728 AATKQ6ZMQ8 1374 aa26.99■■□□□ 1.91
HOXA6-201ENST00000222728 AXIN2Q9Y2T1 843 aa26.98■■□□□ 1.91
HOXA6-201ENST00000222728 RGPD2P0DJD1 1756 aa26.97■■□□□ 1.91
HOXA6-201ENST00000222728 ABCC6O95255 1503 aa26.97■■□□□ 1.91
HOXA6-201ENST00000222728 UNC5CLQ8IV45 518 aa26.97■■□□□ 1.91
HOXA6-201ENST00000222728 EMILIN1Q9Y6C2 1016 aa26.97■■□□□ 1.91
HOXA6-201ENST00000222728 ZNF772Q68DY9 489 aaPredicted RBP26.96■■□□□ 1.91
HOXA6-201ENST00000222728 STRN4Q9NRL3 753 aa26.96■■□□□ 1.91
HOXA6-201ENST00000222728 COL5A2P05997 1499 aaPredicted RBP26.95■■□□□ 1.91
HOXA6-201ENST00000222728 AMPHP49418 695 aa26.95■■□□□ 1.9
HOXA6-201ENST00000222728 POTEAQ6S8J7 498 aa26.94■■□□□ 1.9
HOXA6-201ENST00000222728 PPM1GO15355 546 aaPredicted RBP26.93■■□□□ 1.9
HOXA6-201ENST00000222728 ATRNO75882 1429 aa26.92■■□□□ 1.9
HOXA6-201ENST00000222728 HOXC9P31274 260 aa26.92■■□□□ 1.9
HOXA6-201ENST00000222728 EVA1CP58658 441 aa26.92■■□□□ 1.9
HOXA6-201ENST00000222728 IP6K1Q92551 441 aa26.92■■□□□ 1.9
HOXA6-201ENST00000222728 QTRT2Q9H974 415 aaKnown RBP26.92■■□□□ 1.9
HOXA6-201ENST00000222728 POLKQ9UBT6 870 aa26.92■■□□□ 1.9
HOXA6-201ENST00000222728 RTL1A6NKG5 1358 aa26.9■■□□□ 1.9
HOXA6-201ENST00000222728 TRPC5Q9UL62 973 aaPredicted RBP26.9■■□□□ 1.9
HOXA6-201ENST00000222728 LARP1Q6PKG0 1096 aaKnown RBP26.89■■□□□ 1.9
HOXA6-201ENST00000222728 LTV1Q96GA3 475 aaPredicted RBP26.89■■□□□ 1.9
HOXA6-201ENST00000222728 CCDC9Q9Y3X0 531 aaKnown RBP26.89■■□□□ 1.9
HOXA6-201ENST00000222728 BLMP54132 1417 aaPredicted RBP26.89■■□□□ 1.89
HOXA6-201ENST00000222728 GLI3P10071 1580 aa26.88■■□□□ 1.89
HOXA6-201ENST00000222728 FLT4P35916 1363 aa26.88■■□□□ 1.89
HOXA6-201ENST00000222728 FAM208AQ9UK61 1670 aaKnown RBP26.88■■□□□ 1.89
HOXA6-201ENST00000222728 VPS72Q15906 364 aa26.87■■□□□ 1.89
HOXA6-201ENST00000222728 HSP90AB2PQ58FF8 381 aa26.87■■□□□ 1.89
HOXA6-201ENST00000222728 CSB-PGBD3P0DP91 1061 aa26.86■■□□□ 1.89
HOXA6-201ENST00000222728 SMG6Q86US8 1419 aaKnown RBP26.86■■□□□ 1.89
HOXA6-201ENST00000222728 ANKRD24Q8TF21 1146 aa26.86■■□□□ 1.89
HOXA6-201ENST00000222728 WNK3Q9BYP7 1800 aa26.85■■□□□ 1.89
HOXA6-201ENST00000222728 KIF24Q5T7B8 1368 aa26.84■■□□□ 1.89
HOXA6-201ENST00000222728 ERBB3P21860 1342 aa26.84■■□□□ 1.89
HOXA6-201ENST00000222728 WDR17Q8IZU2 1322 aa26.84■■□□□ 1.89
HOXA6-201ENST00000222728 PARD3Q8TEW0 1356 aa26.84■■□□□ 1.89
HOXA6-201ENST00000222728 GJD4Q96KN9 370 aaPredicted RBP26.83■■□□□ 1.89
HOXA6-201ENST00000222728 USP35Q9P2H5 1018 aa26.83■■□□□ 1.89
HOXA6-201ENST00000222728 SPATA31A5Q5VU36 1347 aa26.83■■□□□ 1.89
HOXA6-201ENST00000222728 SPATA31A7Q8IWB4 1347 aa26.83■■□□□ 1.89
HOXA6-201ENST00000222728 INSRP06213 1382 aa26.83■■□□□ 1.88
HOXA6-201ENST00000222728 CDK12Q9NYV4 1490 aaPredicted RBP26.82■■□□□ 1.88
HOXA6-201ENST00000222728 MTHFSP49914 203 aa26.82■■□□□ 1.88
HOXA6-201ENST00000222728 TOM1L2Q6ZVM7 507 aa26.82■■□□□ 1.88
HOXA6-201ENST00000222728 CRB1P82279 1406 aa26.82■■□□□ 1.88
HOXA6-201ENST00000222728 RXRBP28702 533 aa26.8■■□□□ 1.88
HOXA6-201ENST00000222728 PPP2R1AP30153 589 aa26.8■■□□□ 1.88
HOXA6-201ENST00000222728 BRWD3Q6RI45 1802 aa26.8■■□□□ 1.88
HOXA6-201ENST00000222728 SPATA31A1Q5TZJ5 1347 aa26.8■■□□□ 1.88
HOXA6-201ENST00000222728 RBM6P78332 1123 aaKnown RBP26.79■■□□□ 1.88
HOXA6-201ENST00000222728 NLRP2Q9NX02 1062 aa26.78■■□□□ 1.88
HOXA6-201ENST00000222728 RALBP1Q15311 655 aa26.75■■□□□ 1.87
HOXA6-201ENST00000222728 FAM98CQ17RN3 349 aaKnown RBP26.75■■□□□ 1.87
HOXA6-201ENST00000222728 EIF4A2Q14240 407 aaKnown RBP26.74■■□□□ 1.87
HOXA6-201ENST00000222728 CARD10Q9BWT7 1032 aa26.74■■□□□ 1.87
HOXA6-201ENST00000222728 THSD7AQ9UPZ6 1657 aa26.73■■□□□ 1.87
HOXA6-201ENST00000222728 TCP11L2Q8N4U5 519 aa26.73■■□□□ 1.87
HOXA6-201ENST00000222728 PRKRIP1Q9H875 184 aaPredicted RBP26.73■■□□□ 1.87
HOXA6-201ENST00000222728 NBPF6Q5VWK0 638 aa26.72■■□□□ 1.87
HOXA6-201ENST00000222728 USHBP1Q8N6Y0 703 aa26.72■■□□□ 1.87
HOXA6-201ENST00000222728 NBPF4Q96M43 638 aa26.72■■□□□ 1.87
HOXA6-201ENST00000222728 COL3A1P02461 1466 aaPredicted RBP26.72■■□□□ 1.87
HOXA6-201ENST00000222728 RGS12O14924 1447 aa26.72■■□□□ 1.87
HOXA6-201ENST00000222728 RGPD1P0DJD0 1748 aa26.71■■□□□ 1.87
HOXA6-201ENST00000222728 A0A0G2JS52 829 aa26.7■■□□□ 1.86
HOXA6-201ENST00000222728 MYT1Q01538 1121 aa26.7■■□□□ 1.86
HOXA6-201ENST00000222728 PARP4Q9UKK3 1724 aaKnown RBP26.7■■□□□ 1.86
HOXA6-201ENST00000222728 MYBBP1AQ9BQG0 1328 aaKnown RBP26.68■■□□□ 1.86
HOXA6-201ENST00000222728 BARGINQ6ZT62 677 aa26.67■■□□□ 1.86
HOXA6-201ENST00000222728 EYA1Q99502 592 aa26.67■■□□□ 1.86
HOXA6-201ENST00000222728 THRAP3Q9Y2W1 955 aaKnown RBP26.67■■□□□ 1.86
HOXA6-201ENST00000222728 LRRC37A3O60309 1634 aa26.67■■□□□ 1.86
HOXA6-201ENST00000222728 IL13P35225 146 aa26.66■■□□□ 1.86
HOXA6-201ENST00000222728 ILDR2Q71H61 639 aa26.66■■□□□ 1.86
HOXA6-201ENST00000222728 SEPT12Q8IYM1 358 aa26.66■■□□□ 1.86
HOXA6-201ENST00000222728 CFAP53Q96M91 514 aa26.65■■□□□ 1.86
HOXA6-201ENST00000222728 DISP2A7MBM2 1401 aa26.65■■□□□ 1.86
HOXA6-201ENST00000222728 ANP32CO43423 234 aa26.64■■□□□ 1.86
HOXA6-201ENST00000222728 ONECUT3O60422 494 aaPredicted RBP26.64■■□□□ 1.86
HOXA6-201ENST00000222728 DIAPH1O60610 1272 aaKnown RBP26.64■■□□□ 1.86
HOXA6-201ENST00000222728 KAT6BQ8WYB5 2073 aa26.64■■□□□ 1.85
HOXA6-201ENST00000222728 NCAPD2Q15021 1401 aa26.62■■□□□ 1.85
HOXA6-201ENST00000222728 MEGF6O75095 1541 aa26.61■■□□□ 1.85
HOXA6-201ENST00000222728 SHANK3Q9BYB0 1731 aa26.61■■□□□ 1.85
HOXA6-201ENST00000222728 IGSF1Q8N6C5 1336 aa26.61■■□□□ 1.85
HOXA6-201ENST00000222728 IL2RBP14784 551 aa26.6■■□□□ 1.85
HOXA6-201ENST00000222728 U2SURPO15042 1029 aaKnown RBP26.58■■□□□ 1.85
HOXA6-201ENST00000222728 AEBP1Q8IUX7 1158 aa26.58■■□□□ 1.85
HOXA6-201ENST00000222728 SULT6B1Q6IMI4 303 aa26.56■■□□□ 1.84
HOXA6-201ENST00000222728 CDCA7Q9BWT1 371 aaPredicted RBP26.56■■□□□ 1.84
HOXA6-201ENST00000222728 PKD1L3Q7Z443 1732 aa26.56■■□□□ 1.84
HOXA6-201ENST00000222728 HMOX1P09601 288 aa26.55■■□□□ 1.84
HOXA6-201ENST00000222728 RAPGEF4Q8WZA2 1011 aa26.55■■□□□ 1.84
HOXA6-201ENST00000222728 TATP17735 454 aaPredicted RBP26.54■■□□□ 1.84
HOXA6-201ENST00000222728 DDB1Q16531 1140 aa26.54■■□□□ 1.84
HOXA6-201ENST00000222728 DIEXFQ68CQ4 756 aaKnown RBP26.53■■□□□ 1.84
HOXA6-201ENST00000222728 OVOS2A0A0G2JMS6 1433 aa26.53■■□□□ 1.84
HOXA6-201ENST00000222728 TNS2Q63HR2 1409 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms