RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 EVA1CP58658 441 aa16.44■□□□□ 0.22
SYPL1-201ENST00000011473 TRPC5Q9UL62 973 aaPredicted RBP16.44■□□□□ 0.22
SYPL1-201ENST00000011473 LMO7Q8WWI1 1683 aa16.44■□□□□ 0.22
SYPL1-201ENST00000011473 AMPHP49418 695 aa16.43■□□□□ 0.22
SYPL1-201ENST00000011473 LARP1Q6PKG0 1096 aaKnown RBP16.43■□□□□ 0.22
SYPL1-201ENST00000011473 USP35Q9P2H5 1018 aa16.43■□□□□ 0.22
SYPL1-201ENST00000011473 COL5A2P05997 1499 aaPredicted RBP16.43■□□□□ 0.22
SYPL1-201ENST00000011473 ATRNO75882 1429 aa16.42■□□□□ 0.22
SYPL1-201ENST00000011473 LTV1Q96GA3 475 aaPredicted RBP16.42■□□□□ 0.22
SYPL1-201ENST00000011473 NRAPQ86VF7 1730 aa16.41■□□□□ 0.22
SYPL1-201ENST00000011473 LTN1O94822 1766 aa16.41■□□□□ 0.22
SYPL1-201ENST00000011473 HOXC9P31274 260 aa16.41■□□□□ 0.22
SYPL1-201ENST00000011473 VPS72Q15906 364 aa16.41■□□□□ 0.22
SYPL1-201ENST00000011473 GJD4Q96KN9 370 aaPredicted RBP16.41■□□□□ 0.22
SYPL1-201ENST00000011473 POLKQ9UBT6 870 aa16.41■□□□□ 0.22
SYPL1-201ENST00000011473 NWD2Q9ULI1 1742 aa16.41■□□□□ 0.22
SYPL1-201ENST00000011473 COL18A1P39060 1754 aa16.41■□□□□ 0.22
SYPL1-201ENST00000011473 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
SYPL1-201ENST00000011473 IP6K1Q92551 441 aa16.4■□□□□ 0.22
SYPL1-201ENST00000011473 CSB-PGBD3P0DP91 1061 aa16.4■□□□□ 0.22
SYPL1-201ENST00000011473 RXRBP28702 533 aa16.4■□□□□ 0.22
SYPL1-201ENST00000011473 ILDR2Q71H61 639 aa16.4■□□□□ 0.22
SYPL1-201ENST00000011473 ERBB3P21860 1342 aa16.39■□□□□ 0.21
SYPL1-201ENST00000011473 ANKRD26Q9UPS8 1709 aa16.39■□□□□ 0.21
SYPL1-201ENST00000011473 TOM1L2Q6ZVM7 507 aa16.39■□□□□ 0.21
SYPL1-201ENST00000011473 ANKRD24Q8TF21 1146 aa16.39■□□□□ 0.21
SYPL1-201ENST00000011473 RBM6P78332 1123 aaKnown RBP16.38■□□□□ 0.21
SYPL1-201ENST00000011473 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
SYPL1-201ENST00000011473 PEAK1Q9H792 1746 aa16.38■□□□□ 0.21
SYPL1-201ENST00000011473 WDR17Q8IZU2 1322 aa16.37■□□□□ 0.21
SYPL1-201ENST00000011473 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.37■□□□□ 0.21
SYPL1-201ENST00000011473 RGPD5Q99666 1765 aa16.37■□□□□ 0.21
SYPL1-201ENST00000011473 FLT4P35916 1363 aa16.37■□□□□ 0.21
SYPL1-201ENST00000011473 SPATA31A5Q5VU36 1347 aa16.37■□□□□ 0.21
SYPL1-201ENST00000011473 SPATA31A7Q8IWB4 1347 aa16.37■□□□□ 0.21
SYPL1-201ENST00000011473 FAM98CQ17RN3 349 aaKnown RBP16.37■□□□□ 0.21
SYPL1-201ENST00000011473 GLI3P10071 1580 aa16.36■□□□□ 0.21
SYPL1-201ENST00000011473 SPATA31A1Q5TZJ5 1347 aa16.36■□□□□ 0.21
SYPL1-201ENST00000011473 BLMP54132 1417 aaPredicted RBP16.36■□□□□ 0.21
SYPL1-201ENST00000011473 RTL1A6NKG5 1358 aa16.36■□□□□ 0.21
SYPL1-201ENST00000011473 NLRP2Q9NX02 1062 aa16.35■□□□□ 0.21
SYPL1-201ENST00000011473 CRB1P82279 1406 aa16.35■□□□□ 0.21
SYPL1-201ENST00000011473 A0A0G2JS52 829 aa16.34■□□□□ 0.21
SYPL1-201ENST00000011473 MTHFSP49914 203 aa16.34■□□□□ 0.21
SYPL1-201ENST00000011473 MYT1Q01538 1121 aa16.34■□□□□ 0.21
SYPL1-201ENST00000011473 ABCC6O95255 1503 aa16.34■□□□□ 0.21
SYPL1-201ENST00000011473 RGS12O14924 1447 aa16.34■□□□□ 0.21
SYPL1-201ENST00000011473 INSRP06213 1382 aa16.33■□□□□ 0.21
SYPL1-201ENST00000011473 EP400Q96L91 3159 aa16.33■□□□□ 0.21
SYPL1-201ENST00000011473 TCP11L2Q8N4U5 519 aa16.32■□□□□ 0.2
SYPL1-201ENST00000011473 USHBP1Q8N6Y0 703 aa16.32■□□□□ 0.2
SYPL1-201ENST00000011473 MAP2P11137 1827 aaKnown RBP16.32■□□□□ 0.2
SYPL1-201ENST00000011473 KIF24Q5T7B8 1368 aa16.32■□□□□ 0.2
SYPL1-201ENST00000011473 SMG6Q86US8 1419 aaKnown RBP16.31■□□□□ 0.2
SYPL1-201ENST00000011473 NBPF6Q5VWK0 638 aa16.31■□□□□ 0.2
SYPL1-201ENST00000011473 SEPT12Q8IYM1 358 aa16.31■□□□□ 0.2
SYPL1-201ENST00000011473 NBPF4Q96M43 638 aa16.31■□□□□ 0.2
SYPL1-201ENST00000011473 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
SYPL1-201ENST00000011473 PPP2R1AP30153 589 aa16.3■□□□□ 0.2
SYPL1-201ENST00000011473 EIF4A2Q14240 407 aaKnown RBP16.3■□□□□ 0.2
SYPL1-201ENST00000011473 PARD3Q8TEW0 1356 aa16.3■□□□□ 0.2
SYPL1-201ENST00000011473 CDK12Q9NYV4 1490 aaPredicted RBP16.29■□□□□ 0.2
SYPL1-201ENST00000011473 ONECUT3O60422 494 aaPredicted RBP16.28■□□□□ 0.2
SYPL1-201ENST00000011473 BARGINQ6ZT62 677 aa16.27■□□□□ 0.2
SYPL1-201ENST00000011473 THRAP3Q9Y2W1 955 aaKnown RBP16.27■□□□□ 0.2
SYPL1-201ENST00000011473 EYA1Q99502 592 aa16.27■□□□□ 0.19
SYPL1-201ENST00000011473 FAM182BQ5T319 152 aa16.26■□□□□ 0.19
SYPL1-201ENST00000011473 RGPD2P0DJD1 1756 aa16.25■□□□□ 0.19
SYPL1-201ENST00000011473 PRKRIP1Q9H875 184 aaPredicted RBP16.25■□□□□ 0.19
SYPL1-201ENST00000011473 RALBP1Q15311 655 aa16.24■□□□□ 0.19
SYPL1-201ENST00000011473 IL13P35225 146 aa16.24■□□□□ 0.19
SYPL1-201ENST00000011473 IL2RBP14784 551 aa16.23■□□□□ 0.19
SYPL1-201ENST00000011473 DISP2A7MBM2 1401 aa16.23■□□□□ 0.19
SYPL1-201ENST00000011473 THSD7AQ9UPZ6 1657 aa16.23■□□□□ 0.19
SYPL1-201ENST00000011473 DIAPH1O60610 1272 aaKnown RBP16.22■□□□□ 0.19
SYPL1-201ENST00000011473 AEBP1Q8IUX7 1158 aa16.22■□□□□ 0.19
SYPL1-201ENST00000011473 MEGF6O75095 1541 aa16.22■□□□□ 0.19
SYPL1-201ENST00000011473 DDB1Q16531 1140 aa16.22■□□□□ 0.19
SYPL1-201ENST00000011473 FAM208AQ9UK61 1670 aaKnown RBP16.22■□□□□ 0.19
SYPL1-201ENST00000011473 COL3A1P02461 1466 aaPredicted RBP16.21■□□□□ 0.19
SYPL1-201ENST00000011473 KRT27Q7Z3Y8 459 aa16.21■□□□□ 0.19
SYPL1-201ENST00000011473 IGSF1Q8N6C5 1336 aa16.21■□□□□ 0.18
SYPL1-201ENST00000011473 MYBBP1AQ9BQG0 1328 aaKnown RBP16.21■□□□□ 0.18
SYPL1-201ENST00000011473 U2SURPO15042 1029 aaKnown RBP16.21■□□□□ 0.18
SYPL1-201ENST00000011473 HMOX1P09601 288 aa16.2■□□□□ 0.18
SYPL1-201ENST00000011473 PDE3BQ13370 1112 aa16.2■□□□□ 0.18
SYPL1-201ENST00000011473 CFAP53Q96M91 514 aa16.2■□□□□ 0.18
SYPL1-201ENST00000011473 SULT6B1Q6IMI4 303 aa16.19■□□□□ 0.18
SYPL1-201ENST00000011473 RAPGEF4Q8WZA2 1011 aa16.19■□□□□ 0.18
SYPL1-201ENST00000011473 LRRC37A3O60309 1634 aa16.19■□□□□ 0.18
SYPL1-201ENST00000011473 BRWD3Q6RI45 1802 aa16.18■□□□□ 0.18
SYPL1-201ENST00000011473 EXOC5O00471 708 aa16.18■□□□□ 0.18
SYPL1-201ENST00000011473 CDCA7Q9BWT1 371 aaPredicted RBP16.18■□□□□ 0.18
SYPL1-201ENST00000011473 NCAPD2Q15021 1401 aa16.18■□□□□ 0.18
SYPL1-201ENST00000011473 ANP32CO43423 234 aa16.17■□□□□ 0.18
SYPL1-201ENST00000011473 MARCH10Q8NA82 808 aaPredicted RBP16.17■□□□□ 0.18
SYPL1-201ENST00000011473 DDX54Q8TDD1 881 aaKnown RBP16.17■□□□□ 0.18
SYPL1-201ENST00000011473 WNK3Q9BYP7 1800 aa16.17■□□□□ 0.18
SYPL1-201ENST00000011473 OVOS2A0A0G2JMS6 1433 aa16.16■□□□□ 0.18
SYPL1-201ENST00000011473 TATP17735 454 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms