RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 TMEM174Q8WUU8 243 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 HSFY1Q96LI6 401 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 PSMB7Q99436 277 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 DPYSL5Q9BPU6 564 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 C7orf25Q9BPX7 421 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 CEP44Q9C0F1 390 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 TMEM8AQ9HCN3 771 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 RRN3Q9NYV6 651 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 RPS6KL1Q9Y6S9 549 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 NYNRINQ9P2P1 1898 aaKnown RBP11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 HEATR9A2RTY3 570 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 A6NCN8 305 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 M0QYV0 167 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 PDXKO00764 312 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 KATNA1O75449 491 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 GABBR2O75899 941 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 DNAJB5O75953 348 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 ADCY5O95622 1261 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 TRUB2O95900 331 aaKnown RBP11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 THRAP10827 490 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 DLSTP36957 453 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 GPR3P46089 330 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 CDH4P55283 916 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 MTA1Q13330 715 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 IRF4Q15306 451 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 NR6A1Q15406 480 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 ZNF805Q5CZA5 627 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 NKAIN2Q5VXU1 208 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 RETSATQ6NUM9 610 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 LCLAT1Q6UWP7 414 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 IQUBQ8NA54 791 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 DCAF4L2Q8NA75 395 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 TP53I13Q8NBR0 393 aaPredicted RBP11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 FBXL13Q8NEE6 735 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 DHX58Q96C10 678 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 WDR92Q96MX6 357 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 APOOQ9BUR5 198 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 SLC25A23Q9BV35 468 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 MFRPQ9BY79 579 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 SPRY4Q9C004 299 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 TWSG1Q9GZX9 223 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 BLZF1Q9H2G9 400 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 ZSCAN16Q9H4T2 348 aaPredicted RBP11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 FAM204AQ9H8W3 233 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 ST7Q9NRC1 585 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 RAB20Q9NX57 234 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 HECAQ9UBI9 543 aaPredicted RBP11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 KCND3Q9UK17 655 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 OR1A2Q9Y585 309 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 DGKBQ9Y6T7 804 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 TACC2O95359 2948 aa11.11□□□□□ -0.63
PTP4A1-207ENST00000639568 SYNJ2BP-COX16A0A087WUM0 186 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 PVALEFA0A1B0GWK0 134 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 PIPSLA2A3N6 862 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 MAPK13O15264 365 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 PDIA4P13667 645 aaKnown RBP11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 GTF2H1P32780 548 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 IRAK1P51617 712 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 MAZP56270 477 aaKnown RBP11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 MC2RQ01718 297 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 SLC20A2Q08357 652 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 INPP5AQ14642 412 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 BEND5Q7L4P6 421 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 APLFQ8IW19 511 aaPredicted RBP11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 SEMA4DQ92854 862 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 EEF2KMTQ96G04 330 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 PDXPQ96GD0 296 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 SPON2Q9BUD6 331 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 WRAP53Q9BUR4 548 aaKnown RBP11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 SLC4A5Q9BY07 1137 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 COX16Q9P0S2 106 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 LUZP4Q9P127 313 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 SMC3Q9UQE7 1217 aa11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 TMEM184BQ9Y519 407 aaPredicted RBP11.1□□□□□ -0.63
PTP4A1-207ENST00000639568 TRPM6Q9BX84 2022 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 UNC13CQ8NB66 2214 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 AKAP9Q99996 3911 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 A0A0D9SEW6 157 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 ANKUB1A6NFN9 424 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 KRIT1O00522 736 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 AREL1O15033 823 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 CALUO43852 315 aaPredicted RBP11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 ZNF821O75541 412 aaPredicted RBP11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 CBX6O95503 412 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 FURINP09958 794 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 TIMP2P16035 220 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 F8A1P23610 371 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 SERPINH1P50454 418 aaKnown RBP11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 PER3P56645 1201 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 E2F4Q16254 413 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 LRRC73Q5JTD7 316 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 SNAP47Q5SQN1 464 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 JMJD6Q6NYC1 403 aaPredicted RBP11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 ZNF438Q7Z4V0 828 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 SETD3Q86TU7 594 aaPredicted RBP11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 TMEM135Q86UB9 458 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 BMPERQ8N8U9 685 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 OR56A4Q8NGH8 313 aa11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 AHCYL2Q96HN2 611 aaKnown RBP11.09□□□□□ -0.63
PTP4A1-207ENST00000639568 LURAP1Q96LR2 239 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms