RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 DNAJC24Q6P3W2 148 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 PHACTR4Q8IZ21 702 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 CXorf40AQ8TE69 158 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 CPLX3Q8WVH0 158 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 ARHGEF26Q96DR7 871 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 EXOC2Q96KP1 924 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 ZNF578Q96N58 590 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-221ENST00000619555 FCRL3Q96P31 734 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-221ENST00000619555 MCEEQ96PE7 176 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 IL12RB2Q99665 862 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 WRAP53Q9BUR4 548 aaKnown RBP11.29□□□□□ -0.6
TARDBP-221ENST00000619555 EVA1BQ9NVM1 165 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 TAS2R14Q9NYV8 317 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 AIPL1Q9NZN9 384 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 SPASTQ9UBP0 616 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 DKK3Q9UBP4 350 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 LHX3Q9UBR4 397 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 SALL4Q9UJQ4 1053 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 FZD10Q9ULW2 581 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 MFHAS1Q9Y4C4 1052 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 UNC13CQ8NB66 2214 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 FLNBO75369 2602 aaKnown RBP11.29□□□□□ -0.6
TARDBP-221ENST00000619555 COL27A1Q8IZC6 1860 aaPredicted RBP11.28□□□□□ -0.6
TARDBP-221ENST00000619555 A0A1W2PNU3 283 aaPredicted RBP11.28□□□□□ -0.6
TARDBP-221ENST00000619555 A0A1W2PQJ5 194 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 EME2A4GXA9 379 aaPredicted RBP11.28□□□□□ -0.6
TARDBP-221ENST00000619555 WASH4PA8MWX3 477 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 TPP1O14773 563 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 MUSKO15146 869 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 CELA2BP08218 269 aaPredicted RBP11.28□□□□□ -0.6
TARDBP-221ENST00000619555 SKILP12757 684 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 EIF4A3P38919 411 aaKnown RBP11.28□□□□□ -0.6
TARDBP-221ENST00000619555 PRKCIP41743 596 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 LSSP48449 732 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 YBEYP58557 167 aaPredicted RBP11.28□□□□□ -0.6
TARDBP-221ENST00000619555 OGDHQ02218 1023 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 SERINC3Q13530 473 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 PTK2BQ14289 1009 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 NR0B2Q15466 257 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 ASIC2Q16515 512 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 PRRT3Q5FWE3 981 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 PERM1Q5SV97 790 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 PPP1R15BQ5SWA1 713 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 FAXCQ5TGI0 409 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 SARM1Q6SZW1 724 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 NYAP1Q6ZVC0 841 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 ZNF571Q7Z3V5 609 aaPredicted RBP11.28□□□□□ -0.6
TARDBP-221ENST00000619555 DNAAF5Q86Y56 855 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 SLC35F3Q8IY50 421 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 UMODL1-AS1Q8N2C9 162 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 TP53I13Q8NBR0 393 aaPredicted RBP11.28□□□□□ -0.6
TARDBP-221ENST00000619555 BTN2A2Q8WVV5 523 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 CASKIN2Q8WXE0 1202 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 HIC2Q96JB3 615 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 LGMNQ99538 433 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 EPAS1Q99814 870 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 CNPY3Q9BT09 278 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 LRRC61Q9BV99 259 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 EDEM3Q9BZQ6 932 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 CLPBQ9H078 707 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 HAUS4Q9H6D7 363 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 CATSPERBQ9H7T0 1116 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 POLR1BQ9H9Y6 1135 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 GPATCH2LQ9NWQ4 482 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 APOBEC3BQ9UH17 382 aaKnown RBP11.28□□□□□ -0.6
TARDBP-221ENST00000619555 CAPN11Q9UMQ6 739 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 COQ6Q9Y2Z9 468 aa11.28□□□□□ -0.6
TARDBP-221ENST00000619555 COL6A6A6NMZ7 2263 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 LMO7DNF2Z398 122 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 J3KR12 359 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 ATXN7O15265 892 aaPredicted RBP11.27□□□□□ -0.61
TARDBP-221ENST00000619555 YY2O15391 372 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 BUB1BO60566 1050 aaPredicted RBP11.27□□□□□ -0.61
TARDBP-221ENST00000619555 DXOO77932 396 aaKnown RBP11.27□□□□□ -0.61
TARDBP-221ENST00000619555 ANXA6P08133 673 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 TSHRP16473 764 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 XPAP23025 273 aaPredicted RBP11.27□□□□□ -0.61
TARDBP-221ENST00000619555 CASP14P31944 242 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 PCBP4P57723 403 aaKnown RBP11.27□□□□□ -0.61
TARDBP-221ENST00000619555 YPEL5P62699 121 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 CXADRP78310 365 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 IRF4Q15306 451 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 TCEA2Q15560 299 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 WSCD2Q2TBF2 565 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 PARP15Q460N3 678 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 TMEM52BQ4KMG9 183 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 HGSNATQ68CP4 663 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 ACAD10Q6JQN1 1059 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 DCUN1D2Q6PH85 259 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 GPR155Q7Z3F1 870 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 VSTM4Q8IW00 320 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 MCOLN2Q8IZK6 566 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 LSMEM2Q8N112 164 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 ZNF248Q8NDW4 579 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 ATXN7L3BQ96GX2 97 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 CELF6Q96J87 481 aaKnown RBP11.27□□□□□ -0.61
TARDBP-221ENST00000619555 BOCQ9BWV1 1114 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 C1QTNF7Q9BXJ2 289 aa11.27□□□□□ -0.61
TARDBP-221ENST00000619555 CPEB1Q9BZB8 566 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms