RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 CDC42EP1Q00587 391 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 PRPSAP1Q14558 356 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 PCLAFQ15004 111 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 TRMT5Q32P41 509 aaKnown RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 TCHHL1Q5QJ38 904 aaPredicted RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 LCE2AQ5TA79 106 aaPredicted RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 MBLAC2Q68D91 279 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 IZUMO2Q6UXV1 221 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 CLEC20AQ6ZU45 233 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 DEFB107AQ8IZN7 70 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 CBARPQ8N350 705 aaPredicted RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.43□□□□□ -1.54
VAPA-203ENST00000577539 ZSCAN1Q8NBB4 408 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 ACMSDQ8TDX5 336 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 NRG4Q8WWG1 115 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 SGF29Q96ES7 293 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 MRGPRX3Q96LB0 322 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 ANKRD27Q96NW4 1050 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 HNRNPABQ99729 332 aaKnown RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 DDX50Q9BQ39 737 aaKnown RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 RHOBTB2Q9BYZ6 727 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 ATXN3LQ9H3M9 355 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 FAM124BQ9H5Z6 455 aaPredicted RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 STX18Q9P2W9 335 aaKnown RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 COPG2Q9UBF2 871 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 NUDT5Q9UKK9 219 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 EMCNQ9ULC0 261 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 LRCH1Q9Y2L9 728 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 CHURC1-FNTBB4DL54 471 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 SNNO75324 88 aaPredicted RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 SMNDC1O75940 238 aaKnown RBP eCLIP5.43□□□□□ -1.54
VAPA-203ENST00000577539 TOMM70O94826 608 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 C2P06681 752 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 ANPEPP15144 967 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 GRK2P25098 689 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 SERPINB5P36952 375 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 SERPINB8P50452 374 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 IRF9Q00978 393 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 POU6F1Q14863 301 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 ANKRD20A4Q4UJ75 823 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 SPANXN3Q5MJ09 141 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 RABGAP1LQ5R372 815 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 GRTP1Q5TC63 336 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 ITPRIPL1Q6GPH6 555 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 FSTL4Q6MZW2 842 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 KCNMB4Q86W47 210 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 SPATA6LQ8N4H0 392 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 SHKBP1Q8TBC3 707 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 BRI3BPQ8WY22 251 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 OLFM3Q96PB7 478 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 PANX3Q96QZ0 392 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 NPY6RQ99463 290 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 CPNE1Q99829 537 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 TKTL2Q9H0I9 626 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 MMADHCQ9H3L0 296 aaPredicted RBP5.43□□□□□ -1.54
VAPA-203ENST00000577539 CRTAC1Q9NQ79 661 aa5.43□□□□□ -1.54
VAPA-203ENST00000577539 CITO14578 2027 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 SMIM35A0A1B0GVV1 85 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 KRBA1A5PL33 1030 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 CAPN14A8MX76 684 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 MAGEC1O60732 1142 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 PMPCBO75439 489 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 LTFP02788 710 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 ACADSP16219 412 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 CCNG1P51959 295 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 NIPAL4Q0D2K0 466 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 ASPHQ12797 758 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 TIFABQ6ZNK6 161 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 OTOP3Q7RTS5 596 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 FAM35AQ86V20 835 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 ZNF781Q8N8C0 355 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 URGCPQ8TCY9 931 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 ZNF778Q96MU6 729 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 CCDC106Q9BWC9 280 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 WDR55Q9H6Y2 383 aaPredicted RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 GDAP2Q9NXN4 497 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 RCOR3Q9P2K3 495 aaPredicted RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 OR12D3Q9UGF7 316 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 RGPD3A6NKT7 1758 aaPredicted RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 RGPD4Q7Z3J3 1758 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 ZNF487B1APH4 448 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 B3GAT3O94766 335 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 GLUD2P49448 558 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 SLC12A2P55011 1212 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 CACNB2Q08289 660 aaPredicted RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 ITKQ08881 620 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 TBCCQ15814 346 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 NKG7Q16617 165 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 STEAP4Q687X5 459 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 USP50Q70EL3 339 aaPredicted RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 GPRIN1Q7Z2K8 1008 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 NET1Q7Z628 596 aaPredicted RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 TDRD5Q8NAT2 981 aaKnown RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 SPATA22Q8NHS9 363 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 RAB3IL1Q8TBN0 382 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 PCED1BQ96HM7 432 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 VPS39Q96JC1 886 aa5.42□□□□□ -1.54
VAPA-203ENST00000577539 ZNF184Q99676 751 aaPredicted RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 C11orf84Q9BUA3 381 aaPredicted RBP5.42□□□□□ -1.54
VAPA-203ENST00000577539 GSX1Q9H4S2 264 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms