RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 TRIM5Q9C035 493 aa20.83■□□□□ 0.93
HIF1A-206ENST00000553999 MSRB2Q9Y3D2 182 aa20.83■□□□□ 0.93
HIF1A-206ENST00000553999 MAP1BP46821 2468 aaKnown RBP20.82■□□□□ 0.92
HIF1A-206ENST00000553999 SIGLEC6O43699 453 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 TM7SF2O76062 418 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 PROSCO94903 275 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 PROS1P07225 676 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 DGKAP23743 735 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 SERPINA4P29622 427 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 RXRGP48443 463 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 BCL2L1Q07817 233 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 FZD2Q14332 565 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 UGP2Q16851 508 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 ASTE1Q2TB18 679 aaPredicted RBP20.82■□□□□ 0.92
HIF1A-206ENST00000553999 FAM182AQ5T1J6 154 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 KANSL1Q7Z3B3 1105 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 RBFAQ8N0V3 343 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 SLC25A45Q8N413 288 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 KCTD6Q8NC69 237 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 CCDC42Q96M95 316 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 CPEB1Q9BZB8 566 aaKnown RBP20.82■□□□□ 0.92
HIF1A-206ENST00000553999 ATP13A3Q9H7F0 1226 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 NHEJ1Q9H9Q4 299 aaPredicted RBP20.82■□□□□ 0.92
HIF1A-206ENST00000553999 DKK3Q9UBP4 350 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 SEPT3Q9UH03 358 aa20.82■□□□□ 0.92
HIF1A-206ENST00000553999 PIAS2O75928 621 aa20.81■□□□□ 0.92
HIF1A-206ENST00000553999 PCCBP05166 539 aa20.81■□□□□ 0.92
HIF1A-206ENST00000553999 C6P13671 934 aa20.81■□□□□ 0.92
HIF1A-206ENST00000553999 ZNF135P52742 658 aaPredicted RBP20.81■□□□□ 0.92
HIF1A-206ENST00000553999 DPYSL3Q14195 570 aa20.81■□□□□ 0.92
HIF1A-206ENST00000553999 ERAP2Q6P179 960 aa20.81■□□□□ 0.92
HIF1A-206ENST00000553999 NYAP1Q6ZVC0 841 aa20.81■□□□□ 0.92
HIF1A-206ENST00000553999 PGBD5Q8N414 524 aa20.81■□□□□ 0.92
HIF1A-206ENST00000553999 LZTR1Q8N653 840 aa20.81■□□□□ 0.92
HIF1A-206ENST00000553999 TSC1Q92574 1164 aa20.81■□□□□ 0.92
HIF1A-206ENST00000553999 TCEAL2Q9H3H9 227 aaPredicted RBP20.81■□□□□ 0.92
HIF1A-206ENST00000553999 ZMIZ1Q9ULJ6 1067 aa20.81■□□□□ 0.92
HIF1A-206ENST00000553999 HYOU1Q9Y4L1 999 aa20.81■□□□□ 0.92
HIF1A-206ENST00000553999 TTLL3Q9Y4R7 772 aa20.81■□□□□ 0.92
HIF1A-206ENST00000553999 HS3ST3A1Q9Y663 406 aa20.81■□□□□ 0.92
HIF1A-206ENST00000553999 SSU72P8A0A1W2PR75 194 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 LZTS3O60299 673 aaPredicted RBP20.8■□□□□ 0.92
HIF1A-206ENST00000553999 SERPINB6P35237 376 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 RABIFP47224 123 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 LIG3P49916 1009 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 THOP1P52888 689 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 DAB2P98082 770 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 ELP6Q0PNE2 266 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 DENND2CQ68D51 928 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 TP53I13Q8NBR0 393 aaPredicted RBP20.8■□□□□ 0.92
HIF1A-206ENST00000553999 TUBGCP5Q96RT8 1024 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 NT5MQ9NPB1 228 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 SCUBE2Q9NQ36 999 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 UVRAGQ9P2Y5 699 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 KLF15Q9UIH9 416 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 ATP8A1Q9Y2Q0 1164 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 PCDHGC4Q9Y5F7 938 aa20.8■□□□□ 0.92
HIF1A-206ENST00000553999 TSPAN11A1L157 253 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 AKR1B15C9JRZ8 316 aaPredicted RBP20.79■□□□□ 0.92
HIF1A-206ENST00000553999 MAFKO60675 156 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 RFPL3O75679 317 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 PEX11BO96011 259 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 TMEM253P0C7T8 217 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 IL4RP24394 825 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 MMP12P39900 470 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 ACADVLP49748 655 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 ITKQ08881 620 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 C1orf61Q13536 156 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 TMEM52BQ4KMG9 183 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 NCBP2-AS2Q69YL0 99 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 BRAT1Q6PJG6 821 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 PARGQ86W56 976 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 PCDH19Q8TAB3 1148 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 SLC35G2Q8TBE7 412 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 NSMCE1Q8WV22 266 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 CENPTQ96BT3 561 aa20.79■□□□□ 0.92
HIF1A-206ENST00000553999 ZNF641Q96N77 438 aaPredicted RBP20.79■□□□□ 0.92
HIF1A-206ENST00000553999 TDRD6O60522 2096 aaKnown RBP20.79■□□□□ 0.92
HIF1A-206ENST00000553999 CEP295Q9C0D2 2601 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 SPTY2D1-AS1A0A0U1RR47 76 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 RIOK3O14730 519 aaKnown RBP20.78■□□□□ 0.92
HIF1A-206ENST00000553999 MMP13P45452 471 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 ARSEP51690 589 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 PFN3P60673 137 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 AP1S1P61966 158 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 EIF2B5Q13144 721 aaKnown RBP20.78■□□□□ 0.92
HIF1A-206ENST00000553999 RFTN1Q14699 578 aaPredicted RBP20.78■□□□□ 0.92
HIF1A-206ENST00000553999 GRM3Q14832 879 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 PTPRRQ15256 657 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 WSCD2Q2TBF2 565 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 HS1BP3Q53T59 392 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 ANKRD20A8PQ5CZ79 823 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 DENND6BQ8NEG7 585 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 ZNF548Q8NEK5 533 aaPredicted RBP20.78■□□□□ 0.92
HIF1A-206ENST00000553999 LMX1AQ8TE12 382 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 RAPGEF5Q92565 580 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 LENG8Q96PV6 779 aaPredicted RBP20.78■□□□□ 0.92
HIF1A-206ENST00000553999 PSKH2Q96QS6 385 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 C1QTNF7Q9BXJ2 289 aa20.78■□□□□ 0.92
HIF1A-206ENST00000553999 NOD2Q9HC29 1040 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms