RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 NR1D2Q14995 579 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 NFIL3Q16649 462 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 KLHL40Q2TBA0 621 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 ALFQ53S48 1182 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 ZNF805Q5CZA5 627 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 SPECC1LQ69YQ0 1117 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 NRSN1Q8IZ57 195 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 BMPERQ8N8U9 685 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 MARVELD3Q96A59 401 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 VOPP1Q96AW1 172 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 RTP4Q96DX8 246 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 TEFMQ96QE5 360 aaKnown RBP14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 POPDC2Q9HBU9 364 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 HS3ST4Q9Y661 456 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 MRPS18BQ9Y676 258 aaKnown RBP14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 CCDC168Q8NDH2 2452 aa14.02□□□□□ -0.17
NKX3-1-202ENST00000523261 POLR2DO15514 142 aaKnown RBP14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 TNFP01375 233 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 THRAP10827 490 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 F8A1P23610 371 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 BRD2P25440 801 aaKnown RBP14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 GKP32189 559 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 PSMC2P35998 433 aaKnown RBP14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 NASPP49321 788 aaPredicted RBP14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 YWHAZP63104 245 aaKnown RBP14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 NADK2Q4G0N4 442 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 PRR30Q53SZ7 412 aaPredicted RBP14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 LRRC73Q5JTD7 316 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 SHC4Q6S5L8 630 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 SETD3Q86TU7 594 aaPredicted RBP14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 C17orf82Q86X59 251 aaPredicted RBP14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 FAM129CQ86XR2 697 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 GRAMD1CQ8IYS0 662 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 OR4D9Q8NGE8 314 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 WDR92Q96MX6 357 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 APOOQ9BUR5 198 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 DPEP2Q9H4A9 486 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 FAM204AQ9H8W3 233 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 ST7Q9NRC1 585 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 EXOC1Q9NV70 894 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 DDIT4Q9NX09 232 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 TMEM184BQ9Y519 407 aaPredicted RBP14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 AKAP9Q99996 3911 aa14.01□□□□□ -0.17
NKX3-1-202ENST00000523261 SYNJ2BP-COX16A0A087WUM0 186 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 HNRNPRO43390 633 aaKnown RBP14□□□□□ -0.17
NKX3-1-202ENST00000523261 ZMPSTE24O75844 475 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 ADCY5O95622 1261 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 CALCAP01258 141 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 FURINP09958 794 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 PMS2P54278 862 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 MAZP56270 477 aaKnown RBP14□□□□□ -0.17
NKX3-1-202ENST00000523261 LRRC14Q15048 493 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 STILQ15468 1287 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 INPP5JQ15735 1006 aaPredicted RBP14□□□□□ -0.17
NKX3-1-202ENST00000523261 WSCD2Q2TBF2 565 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 FOXR2Q6PJQ5 311 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 TMEM270Q6UE05 265 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 KDELC2Q7Z4H8 507 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 IRF2BP1Q8IU81 584 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 OR7D4Q8NG98 312 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 OR6K2Q8NGY2 324 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 ATL2Q8NHH9 583 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 CXorf40AQ8TE69 158 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 OR1E3Q8WZA6 343 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 TM6SF2Q9BZW4 377 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 COX16Q9P0S2 106 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 POLHQ9Y253 713 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 FCF1Q9Y324 198 aaKnown RBP14□□□□□ -0.17
NKX3-1-202ENST00000523261 COQ4Q9Y3A0 265 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 OR1A2Q9Y585 309 aa14□□□□□ -0.17
NKX3-1-202ENST00000523261 ZSCAN21Q9Y5A6 473 aaPredicted RBP14□□□□□ -0.17
NKX3-1-202ENST00000523261 RHPN2P1A8MT19 583 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 RNF225M0QZC1 329 aaPredicted RBP13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 PAGE1O75459 146 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 TIMP2P16035 220 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 ITIH2P19823 946 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 MPSTP25325 297 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 CSF2RBP32927 897 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 STAT5AP42229 794 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 GPD2P43304 727 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 SLC20A2Q08357 652 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 DPYDQ12882 1025 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 SQSTM1Q13501 440 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 INPP5AQ14642 412 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 NAA30Q147X3 362 aaPredicted RBP13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 STK38Q15208 465 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 TAF5Q15542 800 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 RETSATQ6NUM9 610 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 PLPP6Q8IY26 295 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 TTC13Q8NBP0 860 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 LINC00301Q8NCQ3 95 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 CCL4L1Q8NHW4 92 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 POM121Q96HA1 1249 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 CTRCQ99895 268 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 WRAP53Q9BUR4 548 aaKnown RBP13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 UNKQ9C0B0 810 aaKnown RBP13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 SIK2Q9H0K1 926 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 TMEM168Q9H0V1 697 aa13.99□□□□□ -0.17
NKX3-1-202ENST00000523261 TRIT1Q9H3H1 467 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms