RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 MARCOQ9UEW3 520 aaPredicted RBP18.5■□□□□ 0.55
SDC2-202ENST00000518385 EMCNQ9ULC0 261 aa18.5■□□□□ 0.55
SDC2-202ENST00000518385 MYO16Q9Y6X6 1858 aa18.5■□□□□ 0.55
SDC2-202ENST00000518385 MAGEB16A2A368 324 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 CACNG3O60359 315 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 TNFAIP8O95379 198 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 CAPNS1P04632 268 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 SERPINB8P50452 374 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 SLC25A3Q00325 362 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 TBL3Q12788 808 aaKnown RBP18.49■□□□□ 0.55
SDC2-202ENST00000518385 TRIP10Q15642 601 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 SYCP2LQ5T4T6 812 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 EPGNQ6UW88 154 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 RNF19BQ6ZMZ0 732 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 SPATA24Q86W54 205 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 TRPC4APQ8TEL6 797 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 HIC2Q96JB3 615 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 ZNF778Q96MU6 729 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 PGLYRP2Q96PD5 576 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 C20orf27Q9GZN8 174 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 RETREG1Q9H6L5 497 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 TIMMDC1Q9NPL8 285 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.49■□□□□ 0.55
SDC2-202ENST00000518385 TXNDC16Q9P2K2 825 aa18.49■□□□□ 0.55
SDC2-202ENST00000518385 ZNF638Q14966 1978 aaKnown RBP18.48■□□□□ 0.55
SDC2-202ENST00000518385 KCNK1O00180 336 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 ZNF195O14628 629 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 VNN2O95498 520 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 SRGAP2BP0DMP2 458 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 NPY2RP49146 381 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 TUFMP49411 452 aaKnown RBP18.48■□□□□ 0.55
SDC2-202ENST00000518385 RING1Q06587 406 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 PDE1CQ14123 709 aaPredicted RBP18.48■□□□□ 0.55
SDC2-202ENST00000518385 RFTN1Q14699 578 aaPredicted RBP18.48■□□□□ 0.55
SDC2-202ENST00000518385 PABPC1LQ4VXU2 614 aaKnown RBP18.48■□□□□ 0.55
SDC2-202ENST00000518385 ARMC3Q5W041 872 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 AFMIDQ63HM1 303 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 KCTD11Q693B1 232 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 B3GNT6Q6ZMB0 384 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 LINC00523Q86TU6 105 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 GPR65Q8IYL9 337 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 RTL3Q8N8U3 475 aaKnown RBP18.48■□□□□ 0.55
SDC2-202ENST00000518385 RP9Q8TA86 221 aaKnown RBP18.48■□□□□ 0.55
SDC2-202ENST00000518385 OVCA2Q8WZ82 227 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 BTN2A3PQ96KV6 586 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 SORT1Q99523 831 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 CLSTN3Q9BQT9 956 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 TTLL2Q9BWV7 592 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 CDH19Q9H159 772 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 LRRC40Q9H9A6 602 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 OSER1Q9NX31 292 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 BFARQ9NZS9 450 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 GMIPQ9P107 970 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 ADAMTS6Q9UKP5 1117 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 SNX10Q9Y5X0 201 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 HS3ST4Q9Y661 456 aa18.48■□□□□ 0.55
SDC2-202ENST00000518385 E9PAM4 449 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 ADAM12O43184 909 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 TLL1O43897 1013 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 USP1O94782 785 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 ITGA2BP08514 1039 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 ZDHHC11BP0C7U3 371 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 RHOQP17081 205 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 OR1D2P34982 312 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 SPRP35270 261 aaPredicted RBP18.47■□□□□ 0.55
SDC2-202ENST00000518385 ALDH1A3P47895 512 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 FOLH1Q04609 750 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 MGAT5BQ3V5L5 792 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 COL13A1Q5TAT6 717 aaPredicted RBP18.47■□□□□ 0.55
SDC2-202ENST00000518385 ARHGAP12Q8IWW6 846 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 TP53INP2Q8IXH6 220 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 DEFB107AQ8IZN7 70 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 ATPAF2Q8N5M1 289 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 ZSCAN18Q8TBC5 510 aaPredicted RBP18.47■□□□□ 0.55
SDC2-202ENST00000518385 RNF217Q8TC41 542 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 MIPOL1Q8TD10 442 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 PYDC1Q8WXC3 89 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 PRICKLE1Q96MT3 831 aaPredicted RBP18.47■□□□□ 0.55
SDC2-202ENST00000518385 UBE2OQ9C0C9 1292 aaKnown RBP18.47■□□□□ 0.55
SDC2-202ENST00000518385 VTI1BQ9UEU0 232 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 DMTF1Q9Y222 760 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 AAR2Q9Y312 384 aaKnown RBP18.47■□□□□ 0.55
SDC2-202ENST00000518385 KIAA1671Q9BY89 1806 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 C15orf38-AP3S2A0A0A6YYH1 394 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 TPP1O14773 563 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 MATN3O15232 486 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 ZBTB24O43167 697 aaPredicted RBP18.47■□□□□ 0.55
SDC2-202ENST00000518385 MSI1O43347 362 aaKnown RBP18.47■□□□□ 0.55
SDC2-202ENST00000518385 FGF18O76093 207 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 ALDOAP04075 364 aaKnown RBP18.47■□□□□ 0.55
SDC2-202ENST00000518385 POLBP06746 335 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 RPL17P18621 184 aaKnown RBP18.47■□□□□ 0.55
SDC2-202ENST00000518385 GPR15P49685 360 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 PGFP49763 221 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 NDST2P52849 883 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 AQP4P55087 323 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 USP46P62068 366 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 KLF10Q13118 480 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 MTM1Q13496 603 aa18.47■□□□□ 0.55
SDC2-202ENST00000518385 SDHAF4Q5VUM1 108 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms