RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 ARSFP54793 590 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 KRT83P78385 493 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 ABATP80404 500 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 SLC18A2Q05940 514 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 CHRNDQ07001 517 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 Q0VFX4 171 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 IFT88Q13099 833 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 ERV3-1Q14264 604 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 NAA25Q14CX7 972 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 PTPN14Q15678 1187 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 PKN2Q16513 984 aaKnown RBP3.32□□□□□ -1.88
RBM28-207ENST00000488249 TAF12Q16514 161 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 ZNF284Q2VY69 593 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 RILPL1Q5EBL4 403 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 FSCBQ5H9T9 825 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 GPATCH4Q5T3I0 446 aaKnown RBP3.32□□□□□ -1.88
RBM28-207ENST00000488249 INTS11Q5TA45 600 aaKnown RBP3.32□□□□□ -1.88
RBM28-207ENST00000488249 SPATA1Q5VX52 437 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 ATG9BQ674R7 924 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 ATG16L1Q676U5 607 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 FAAH2Q6GMR7 532 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 RETSATQ6NUM9 610 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 CPLX2Q6PUV4 134 aaKnown RBP3.32□□□□□ -1.88
RBM28-207ENST00000488249 IL20RBQ6UXL0 311 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 CCDC73Q6ZRK6 1079 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 TRILQ7L0X0 811 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.32□□□□□ -1.88
RBM28-207ENST00000488249 LRRTM4Q86VH4 590 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 PALB2Q86YC2 1186 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 IQCF1Q8N6M8 205 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 TEX9Q8N6V9 391 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 ZMIZ2Q8NF64 920 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 RASSF8Q8NHQ8 419 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 RAB40AQ8WXH6 277 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 CNOT9Q92600 299 aaKnown RBP3.32□□□□□ -1.88
RBM28-207ENST00000488249 TMEM18Q96B42 140 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 ZBTB10Q96DT7 871 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 VMP1Q96GC9 406 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 THOC3Q96J01 351 aaKnown RBP3.32□□□□□ -1.88
RBM28-207ENST00000488249 ZNF479Q96JC4 524 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 UBXN10Q96LJ8 280 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 ZPBPQ9BS86 351 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.32□□□□□ -1.88
RBM28-207ENST00000488249 LHPPQ9H008 270 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 ABCG4Q9H172 646 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 MROH8Q9H579 483 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 MVB12BQ9H7P6 319 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 DBNDD1Q9H9R9 158 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 WDR6Q9NNW5 1121 aaKnown RBP3.32□□□□□ -1.88
RBM28-207ENST00000488249 DCAF16Q9NXF7 216 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 ALKBH4Q9NXW9 302 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 IL36RNQ9UBH0 155 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 TBK1Q9UHD2 729 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 SRPRBQ9Y5M8 271 aaKnown RBP3.32□□□□□ -1.88
RBM28-207ENST00000488249 GPRASP1Q5JY77 1395 aa3.32□□□□□ -1.88
RBM28-207ENST00000488249 TRIP12Q14669 1992 aaPredicted RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 TSPY2A6NKD2 308 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 LACTBL1A8MY62 500 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 PES1O00541 588 aaKnown RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 IKBKBO14920 756 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 PER2O15055 1255 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 TSPY3P0CV98 308 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 TSPY8P0CW00 308 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 CENPAP49450 140 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 TSPY1Q01534 308 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 HNF4GQ14541 408 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 SMC1AQ14683 1233 aaKnown RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 PLCB4Q15147 1175 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 ZKSCAN8Q15776 578 aaPredicted RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 SLC45A4Q5BKX6 768 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 BRINP3Q76B58 766 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 MON1BQ7L1V2 547 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 MEPCEQ7L2J0 689 aaKnown RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 MCM10Q7L590 875 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 FASTKD5Q7L8L6 764 aaKnown RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 PRSS45Q7RTY3 260 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 CPXM2Q8N436 756 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 MCPH1Q8NEM0 835 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 AFAP1L1Q8TED9 768 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 TBC1D22AQ8WUA7 517 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 TMEM170AQ8WVE7 144 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 N4BP2L2Q92802 583 aaPredicted RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 RSRC1Q96IZ7 334 aaKnown RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 BARD1Q99728 777 aaKnown RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 PHF7Q9BWX1 381 aaPredicted RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 MRPL9Q9BYD2 267 aaKnown RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 NPFFR1Q9GZQ6 430 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 RANBP17Q9H2T7 1088 aaKnown RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 EPHX3Q9H6B9 360 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 NKIRAS2Q9NYR9 191 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 IFT80Q9P2H3 777 aaPredicted RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 PDP2Q9P2J9 529 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 GIMAP2Q9UG22 337 aa3.31□□□□□ -1.88
RBM28-207ENST00000488249 PA2G4Q9UQ80 394 aaKnown RBP3.31□□□□□ -1.88
RBM28-207ENST00000488249 C17orf113A0A1B0GUU1 675 aa3.3□□□□□ -1.88
RBM28-207ENST00000488249 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.3□□□□□ -1.88
RBM28-207ENST00000488249 CPLX1O14810 134 aa3.3□□□□□ -1.88
RBM28-207ENST00000488249 NCAM2O15394 837 aa3.3□□□□□ -1.88
RBM28-207ENST00000488249 IPO8O15397 1037 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms