RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 TMEM174Q8WUU8 243 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 USP6NLQ92738 828 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 TMEM18Q96B42 140 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 INTS12Q96CB8 462 aaKnown RBP2.4□□□□□ -2.03
ITGB1-213ENST00000484088 RSRC1Q96IZ7 334 aaKnown RBP2.4□□□□□ -2.03
ITGB1-213ENST00000484088 VCPIP1Q96JH7 1222 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 MAP7D2Q96T17 732 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 MXRA8Q9BRK3 442 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 TRMOQ9BU70 441 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 C1QTNF5Q9BXJ0 243 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 POLDIP3Q9BY77 421 aaKnown RBP2.4□□□□□ -2.03
ITGB1-213ENST00000484088 ZHX3Q9H4I2 956 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 ESRP2Q9H6T0 727 aaKnown RBP2.4□□□□□ -2.03
ITGB1-213ENST00000484088 PLEKHA5Q9HAU0 1116 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 CLK4Q9HAZ1 481 aaKnown RBP2.4□□□□□ -2.03
ITGB1-213ENST00000484088 VEZTQ9HBM0 779 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 SIRT3Q9NTG7 399 aaPredicted RBP2.4□□□□□ -2.03
ITGB1-213ENST00000484088 SPATS2LQ9NUQ6 558 aaKnown RBP2.4□□□□□ -2.03
ITGB1-213ENST00000484088 BABAM1Q9NWV8 329 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 IRAK4Q9NWZ3 460 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 TRNAU1APQ9NX07 287 aaKnown RBP2.4□□□□□ -2.03
ITGB1-213ENST00000484088 ANKRD10Q9NXR5 420 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 ELOVL5Q9NYP7 299 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 PLK2Q9NYY3 685 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 NDRG3Q9UGV2 375 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 SLC45A1Q9Y2W3 748 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 RAP2CQ9Y3L5 183 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 SLC4A4Q9Y6R1 1079 aa2.4□□□□□ -2.03
ITGB1-213ENST00000484088 NOTCH4Q99466 2003 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 GAGE12JA6NER3 117 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 A8MZ25 164 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 STMND1H3BQB6 276 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 SNAP23O00161 211 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 GFPT2O94808 682 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 FTCDO95954 541 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 FGBP02675 491 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 CENPBP07199 599 aaPredicted RBP2.39□□□□□ -2.03
ITGB1-213ENST00000484088 ZNF8P17098 575 aaPredicted RBP2.39□□□□□ -2.03
ITGB1-213ENST00000484088 CDAP32320 146 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 PTGER1P34995 402 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 AVPR1AP37288 418 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 HADHAP40939 763 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 CASP2P42575 452 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 GPR12P47775 334 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 PIP4K2AP48426 406 aaPredicted RBP2.39□□□□□ -2.03
ITGB1-213ENST00000484088 CLCN5P51795 746 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 DRG2P55039 364 aaKnown RBP2.39□□□□□ -2.03
ITGB1-213ENST00000484088 EIF3BP55884 814 aaKnown RBP2.39□□□□□ -2.03
ITGB1-213ENST00000484088 TMPRSS3P57727 454 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 ADORA2A-AS1P86434 159 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 SETQ01105 290 aaPredicted RBP2.39□□□□□ -2.03
ITGB1-213ENST00000484088 CAPSQ13938 189 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 EIF4A2Q14240 407 aaKnown RBP2.39□□□□□ -2.03
ITGB1-213ENST00000484088 HNF4GQ14541 408 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 TAF11Q15544 211 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 COL28A1Q2UY09 1125 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 SOWAHCQ53LP3 525 aaPredicted RBP2.39□□□□□ -2.03
ITGB1-213ENST00000484088 SPATA1Q5VX52 437 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 PLEKHA7Q6IQ23 1121 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 TTI2Q6NXR4 508 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 NCEH1Q6PIU2 408 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 FBXO46Q6PJ61 603 aaPredicted RBP2.39□□□□□ -2.03
ITGB1-213ENST00000484088 SLC16A12Q6ZSM3 486 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 MTSS1LQ765P7 747 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 FASTKD5Q7L8L6 764 aaKnown RBP2.39□□□□□ -2.03
ITGB1-213ENST00000484088 TBC1D26Q86UD7 250 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 TDRPQ86YL5 185 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 KIAA2013Q8IYS2 634 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 NME8Q8N427 588 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 WDTC1Q8N5D0 677 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 ARFGAP1Q8N6T3 406 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 GJC3Q8NFK1 279 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 MPLKIPQ8TAP9 179 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 ETNPPLQ8TBG4 499 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 WASF1Q92558 559 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 KIF1BPQ96EK5 621 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 SAAL1Q96ER3 474 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 MMABQ96EY8 250 aaPredicted RBP2.39□□□□□ -2.03
ITGB1-213ENST00000484088 APOLD1Q96LR9 279 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 TMEM79Q9BSE2 394 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 NUF2Q9BZD4 464 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 LHPPQ9H008 270 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 TERF2IPQ9NYB0 399 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 TBC1D29Q9UFV1 150 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 FBXO9Q9UK97 447 aaPredicted RBP2.39□□□□□ -2.03
ITGB1-213ENST00000484088 NFE2L3Q9Y4A8 694 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 LSM4Q9Y4Z0 139 aaKnown RBP2.39□□□□□ -2.03
ITGB1-213ENST00000484088 KCNE2Q9Y6J6 123 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 ZNF521Q96K83 1311 aa2.39□□□□□ -2.03
ITGB1-213ENST00000484088 A0A096LPK6 155 aa2.38□□□□□ -2.03
ITGB1-213ENST00000484088 A0A1W2PR77 199 aa2.38□□□□□ -2.03
ITGB1-213ENST00000484088 FSD2A1L4K1 749 aa2.38□□□□□ -2.03
ITGB1-213ENST00000484088 FRMD3A2A2Y4 597 aa2.38□□□□□ -2.03
ITGB1-213ENST00000484088 BECN2A8MW95 431 aa2.38□□□□□ -2.03
ITGB1-213ENST00000484088 DDNO94850 711 aaPredicted RBP2.38□□□□□ -2.03
ITGB1-213ENST00000484088 MT-CYBP00156 380 aaPredicted RBP2.38□□□□□ -2.03
ITGB1-213ENST00000484088 LDHCP07864 332 aa2.38□□□□□ -2.03
ITGB1-213ENST00000484088 HOXB5P09067 269 aa2.38□□□□□ -2.03
ITGB1-213ENST00000484088 ACADMP11310 421 aa2.38□□□□□ -2.03
ITGB1-213ENST00000484088 SLC2A4P14672 509 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms