RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 AP1S1P61966 158 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 SEMG2Q02383 582 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 ITKQ08881 620 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 GALNT2Q10471 571 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 INAVAQ3KP66 663 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 ZSCAN30Q86W11 494 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 TMTC1Q8IUR5 882 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 LRRC49Q8IUZ0 686 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 RHOT1Q8IXI2 618 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 OXR1Q8N573 874 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 PQLC3Q8N755 202 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 SPC24Q8NBT2 197 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 HCAR2Q8TDS4 363 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 LRRN4Q8WUT4 740 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 FAF2Q96CS3 445 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 ZNF830Q96NB3 372 aaPredicted RBP12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 C1QTNF2Q9BXJ5 285 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 NT5MQ9NPB1 228 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 ANGPTL2Q9UKU9 493 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 TTLL3Q9Y4R7 772 aa12.73□□□□□ -0.37
PPP1R3F-204ENST00000471261 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 POM121BA6NF01 834 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 YKT6O15498 198 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 CBFA2T3O75081 653 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 TM7SF2O76062 418 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 NDUFA10O95299 355 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 LCA5LO95447 670 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 EPHA8P29322 1005 aaPredicted RBP12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 PMLP29590 882 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 HSPA9P38646 679 aaKnown RBP12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 SUOXP51687 545 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 NAP1L1P55209 391 aaKnown RBP12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 POLR2LP62875 67 aaKnown RBP12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 GBE1Q04446 702 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 BNIP3Q12983 259 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 PAFAH1B3Q15102 231 aaKnown RBP12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 SHBQ15464 509 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 LRRC38Q5VT99 294 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 TIGD7Q6NT04 549 aaPredicted RBP12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 ABI3BPQ7Z7G0 1075 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 ZSWIM9Q86XI8 627 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 SLC22A18ASQ8N1D0 253 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 PGBD5Q8N414 524 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 CCNYQ8ND76 341 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 RNF25Q96BH1 459 aaPredicted RBP12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 RNF157Q96PX1 679 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 CDC6Q99741 560 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 MGME1Q9BQP7 344 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 C1QTNF7Q9BXJ2 289 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 GOLPH3Q9H4A6 298 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 ERVMER34-1Q9H9K5 563 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 NOD2Q9HC29 1040 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 ATP8A1Q9Y2Q0 1164 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 COQ6Q9Y2Z9 468 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 PCDHGC4Q9Y5F7 938 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 HEY1Q9Y5J3 304 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 HS3ST3A1Q9Y663 406 aa12.72□□□□□ -0.37
PPP1R3F-204ENST00000471261 TSPAN11A1L157 253 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 C3orf70A6NLC5 250 aaPredicted RBP12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 A8MX80 341 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 RIOK3O14730 519 aaKnown RBP12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 APOL1O14791 398 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 FTH1P19P0C7X4 201 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 C6P13671 934 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 SPINK2P20155 84 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 MX2P20592 715 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 MMP12P39900 470 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 RABIFP47224 123 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 LIG3P49916 1009 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 DYNLT1P63172 113 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 PDE1CQ14123 709 aaPredicted RBP12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 TCEAL1Q15170 157 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 IFI16Q16666 785 aaKnown RBP12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 TMEM52BQ4KMG9 183 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 CCDC157Q569K6 752 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 ZNF542PQ5EBM4 170 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 KYAT3Q6YP21 454 aaKnown RBP12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 KDM7AQ6ZMT4 941 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 DBX2Q6ZNG2 339 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 RFX6Q8HWS3 928 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 PNPLA1Q8N8W4 532 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 SAP25Q8TEE9 199 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 BMFQ96LC9 184 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 LENG8Q96PV6 779 aaPredicted RBP12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 NUDCD1Q96RS6 583 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 BAG1Q99933 345 aaPredicted RBP12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 DNAJC28Q9NX36 388 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 DDX56Q9NY93 547 aaKnown RBP12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 DTLQ9NZJ0 730 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 FTSJ1Q9UET6 329 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 ALG6Q9Y672 507 aa12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 EPN1Q9Y6I3 576 aaPredicted RBP12.71□□□□□ -0.37
PPP1R3F-204ENST00000471261 CABIN1Q9Y6J0 2220 aa12.7□□□□□ -0.38
PPP1R3F-204ENST00000471261 DOCK9Q9BZ29 2069 aa12.7□□□□□ -0.38
PPP1R3F-204ENST00000471261 TRAFD1O14545 582 aaPredicted RBP12.7□□□□□ -0.38
PPP1R3F-204ENST00000471261 MATN3O15232 486 aa12.7□□□□□ -0.38
PPP1R3F-204ENST00000471261 LZTS3O60299 673 aaPredicted RBP12.7□□□□□ -0.38
PPP1R3F-204ENST00000471261 TOP3BO95985 862 aaKnown RBP12.7□□□□□ -0.38
PPP1R3F-204ENST00000471261 ELFN1P0C7U0 828 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms