RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 COPS7BQ9H9Q2 264 aaPredicted RBP13.88□□□□□ -0.19
BRAT1-203ENST00000467558 MSRAQ9UJ68 235 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 ZMYM5Q9UJ78 669 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 CHD4Q14839 1912 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 NRP1O14786 923 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 ALDH1A2O94788 518 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 ZNF23P17027 643 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 SEMA5AQ13591 1074 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 IL27RAQ6UWB1 636 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 SERPINA13PQ6UXR4 307 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 SPATA22Q8NHS9 363 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 MECRQ9BV79 373 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 CAB39LQ9H9S4 337 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 TBC1D14Q9P2M4 693 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 CCDC154A6NI56 674 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 FGBP02675 491 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 TCF4P15884 667 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 MC4RP32245 332 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 OGDHQ02218 1023 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 SLC1A5Q15758 541 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 RBFAQ8N0V3 343 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 CSGALNACT1Q8TDX6 532 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 TRPC4APQ8TEL6 797 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 COPS8Q99627 209 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 HTATIP2Q9BUP3 242 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 C1QTNF7Q9BXJ2 289 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 SPACA6W5XKT8 324 aa13.88□□□□□ -0.19
BRAT1-203ENST00000467558 MEI4A8MW99 385 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 PFDN1O60925 122 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 FAM155BO75949 473 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 CTPS1P17812 591 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 RABGGTBP53611 331 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 SLC34A1Q06495 639 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 GPR158Q5T848 1215 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 C15orf39Q6ZRI6 1047 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 PDLIM7Q9NR12 457 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 PIGVQ9NUD9 493 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 PLK2Q9NYY3 685 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 DLGAP2Q9P1A6 1054 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 TRAFD1O14545 582 aaPredicted RBP13.87□□□□□ -0.19
BRAT1-203ENST00000467558 RPP40O75818 363 aaKnown RBP13.87□□□□□ -0.19
BRAT1-203ENST00000467558 TMEM63AO94886 807 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 UBTFL6P0CB48 400 aaPredicted RBP13.87□□□□□ -0.19
BRAT1-203ENST00000467558 LRPAP1P30533 357 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 PFKPQ01813 784 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 IL10RBQ08334 325 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 TCHHL1Q5QJ38 904 aaPredicted RBP13.87□□□□□ -0.19
BRAT1-203ENST00000467558 PLPP4Q5VZY2 271 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 GRAMD4Q6IC98 578 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 RHBDF2Q6PJF5 856 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 PATL1Q86TB9 770 aaKnown RBP13.87□□□□□ -0.19
BRAT1-203ENST00000467558 IFNLR1Q8IU57 520 aaPredicted RBP13.87□□□□□ -0.19
BRAT1-203ENST00000467558 MAGEC3Q8TD91 643 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 ATL1Q8WXF7 558 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 KCTD14Q9BQ13 255 aaPredicted RBP13.87□□□□□ -0.19
BRAT1-203ENST00000467558 KLHL4Q9C0H6 718 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 CACNG4Q9UBN1 327 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 SNX10Q9Y5X0 201 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 TJP1Q07157 1748 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 MAGEA13PA6NCF6 341 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 PIRO00625 290 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 CPSF4O95639 269 aaKnown RBP13.87□□□□□ -0.19
BRAT1-203ENST00000467558 EPB42P16452 691 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 HCAR3P49019 387 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 LIMK2P53671 638 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 SLC25A11Q02978 314 aaKnown RBP13.87□□□□□ -0.19
BRAT1-203ENST00000467558 GRM3Q14832 879 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 REPS1Q96D71 796 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 SCLYQ96I15 445 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 NSMCE2Q96MF7 247 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 OSBPL2Q9H1P3 480 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 MIEF1Q9NQG6 463 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 TOGARAM1Q9Y4F4 1720 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 SLC38A8A6NNN8 435 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 C1QTNF3-AMACRE9PGA6 284 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 MAGEC1O60732 1142 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 SERPINA6P08185 405 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 DSC2Q02487 901 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 IRF8Q02556 426 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 ZFP1Q6P2D0 407 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 TXNDC11Q6PKC3 985 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 PRSS55Q6UWB4 352 aaPredicted RBP13.87□□□□□ -0.19
BRAT1-203ENST00000467558 DHFR2Q86XF0 187 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 RNF148Q8N7C7 305 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 OR4K2Q8NGD2 314 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 STYXQ8WUJ0 223 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 ELMO1Q92556 727 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 VPS33AQ96AX1 596 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 MYO19Q96H55 970 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 TBC1D10AQ9BXI6 508 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 TLR6Q9Y2C9 796 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 TBC1D30Q9Y2I9 924 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 TCAF1Q9Y4C2 921 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 RAI2Q9Y5P3 530 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 STRCQ7RTU9 1775 aa13.87□□□□□ -0.19
BRAT1-203ENST00000467558 SHOX2O60902 331 aaPredicted RBP13.86□□□□□ -0.19
BRAT1-203ENST00000467558 MT-CYBP00156 380 aaPredicted RBP13.86□□□□□ -0.19
BRAT1-203ENST00000467558 RPL17P18621 184 aaKnown RBP13.86□□□□□ -0.19
BRAT1-203ENST00000467558 TLE2Q04725 743 aa13.86□□□□□ -0.19
BRAT1-203ENST00000467558 CDC16Q13042 620 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 632.7 ms