RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 HDAC10Q969S8 669 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 SPON1Q9HCB6 807 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 AGPAT4Q9NRZ5 378 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 CCM2LQ9NUG4 571 aaPredicted RBP14.07□□□□□ -0.16
VPS52-212ENST00000445902 WARS2Q9UGM6 360 aaKnown RBP14.07□□□□□ -0.16
VPS52-212ENST00000445902 POU2F3Q9UKI9 436 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 ITGB1BP2Q9UKP3 347 aa14.07□□□□□ -0.16
VPS52-212ENST00000445902 NR5A2O00482 541 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 VWA5AO00534 786 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 MAFGO15525 162 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 PGK1P00558 417 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 APOA4P06727 396 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 TTKP33981 857 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 GJA9P57773 515 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 MPP1Q00013 466 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 OTUD3Q5T2D3 398 aaPredicted RBP14.06□□□□□ -0.16
VPS52-212ENST00000445902 MFSD4BQ5TF39 518 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 PCYOX1LQ8NBM8 494 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 TRAPPC12Q8WVT3 735 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 MAELQ96JY0 434 aaKnown RBP14.06□□□□□ -0.16
VPS52-212ENST00000445902 EIF2AQ9BY44 585 aaKnown RBP14.06□□□□□ -0.16
VPS52-212ENST00000445902 LHPPQ9H008 270 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 EIF2B3Q9NR50 452 aaKnown RBP14.06□□□□□ -0.16
VPS52-212ENST00000445902 ARMC1Q9NVT9 282 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 MAP3K20Q9NYL2 800 aaKnown RBP14.06□□□□□ -0.16
VPS52-212ENST00000445902 KDM4FA0A1W2PPD8 638 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 KPNA4O00629 521 aaPredicted RBP14.06□□□□□ -0.16
VPS52-212ENST00000445902 SYNCRIPO60506 623 aaKnown RBP14.06□□□□□ -0.16
VPS52-212ENST00000445902 NCK1P16333 377 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 IL10P22301 178 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 PSMA4P25789 261 aaKnown RBP14.06□□□□□ -0.16
VPS52-212ENST00000445902 HPCAL1P37235 193 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 PIGFQ07326 219 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 ZBTB17Q13105 803 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 SQLEQ14534 574 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 CYBRD1Q53TN4 286 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 INTS11Q5TA45 600 aaKnown RBP14.06□□□□□ -0.16
VPS52-212ENST00000445902 DSG4Q86SJ6 1040 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 TMEM135Q86UB9 458 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 ZC3HC1Q86WB0 502 aaKnown RBP14.06□□□□□ -0.16
VPS52-212ENST00000445902 ZBTB8OSQ8IWT0 167 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 OR13F1Q8NGS4 319 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 POLE4Q9NR33 117 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 PKD2L2Q9NZM6 624 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 SLC30A1Q9Y6M5 507 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 SCN1AP35498 2009 aa14.06□□□□□ -0.16
VPS52-212ENST00000445902 ZNF646O15015 1829 aaPredicted RBP14.05□□□□□ -0.16
VPS52-212ENST00000445902 CAPGP40121 348 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 EFNA5P52803 228 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 PITX1P78337 314 aaPredicted RBP14.05□□□□□ -0.16
VPS52-212ENST00000445902 SPCS2Q15005 226 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 MAPRE2Q15555 327 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 ATP6AP1Q15904 470 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 THOC7Q6I9Y2 204 aaKnown RBP14.05□□□□□ -0.16
VPS52-212ENST00000445902 ABHD11Q8NFV4 315 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 RDH11Q8TC12 318 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 CCDC138Q96M89 665 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 PCYT2Q99447 389 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 C9orf16Q9BUW7 83 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 CDT1Q9H211 546 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 ADNPQ9H2P0 1102 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 ACOT9Q9Y305 439 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 TRIM64A6NGJ6 449 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 SPATA31C2B4DYI2 1134 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 ACOX3O15254 700 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 INPP4BO15327 924 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 KCNA5P22460 613 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 HK2P52789 917 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 FKBP1AP62942 108 aaKnown RBP14.05□□□□□ -0.16
VPS52-212ENST00000445902 SLC12A1Q13621 1099 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 SF3B4Q15427 424 aaKnown RBP eCLIP14.05□□□□□ -0.161e-6■■■■■ 49.7
VPS52-212ENST00000445902 MAPK11Q15759 364 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 AMHR2Q16671 573 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 KIF19Q2TAC6 998 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 PNPLA1Q8N8W4 532 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 ZNF280CQ8ND82 737 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 USP33Q8TEY7 942 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 PHF21BQ96EK2 531 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 DUS3LQ96G46 650 aaKnown RBP14.05□□□□□ -0.16
VPS52-212ENST00000445902 GPR22Q99680 433 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 BEGAINQ9BUH8 593 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 NT5C1AQ9BXI3 368 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 FTHL17Q9BXU8 183 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 DGCR6LQ9BY27 220 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 SEZ6LQ9BYH1 1024 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 RAD21L1Q9H4I0 556 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 MINDY3Q9H8M7 445 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 PALMDQ9NP74 551 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 TBC1D13Q9NVG8 400 aa14.05□□□□□ -0.16
VPS52-212ENST00000445902 SMPD3Q9NY59 655 aaPredicted RBP14.05□□□□□ -0.16
VPS52-212ENST00000445902 COL11A2P13942 1736 aaPredicted RBP14.05□□□□□ -0.16
VPS52-212ENST00000445902 TARM1B6A8C7 271 aa14.04□□□□□ -0.16
VPS52-212ENST00000445902 XYLBO75191 536 aa14.04□□□□□ -0.16
VPS52-212ENST00000445902 AHSGP02765 367 aa14.04□□□□□ -0.16
VPS52-212ENST00000445902 TCEA1P23193 301 aaKnown RBP14.04□□□□□ -0.16
VPS52-212ENST00000445902 GNL1P36915 607 aaPredicted RBP14.04□□□□□ -0.16
VPS52-212ENST00000445902 PCYT1AP49585 367 aa14.04□□□□□ -0.16
VPS52-212ENST00000445902 CCT8P50990 548 aa14.04□□□□□ -0.16
VPS52-212ENST00000445902 PPIL2Q13356 520 aa14.04□□□□□ -0.16
VPS52-212ENST00000445902 OXA1LQ15070 435 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms