RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 YPEL5P62699 121 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 ELP6Q0PNE2 266 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 GRM3Q14832 879 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 DEFB133Q30KQ1 61 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 PPP6R3Q5H9R7 873 aaPredicted RBP14.37□□□□□ -0.11
NELFE-201ENST00000375425 CYP4V2Q6ZWL3 525 aaPredicted RBP14.37□□□□□ -0.11
NELFE-201ENST00000375425 CAMK1DQ8IU85 385 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 ARHGAP12Q8IWW6 846 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 BTN2A2Q8WVV5 523 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 ZNF653Q96CK0 615 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 ZNF641Q96N77 438 aaPredicted RBP14.37□□□□□ -0.11
NELFE-201ENST00000375425 DCBLD2Q96PD2 775 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 FUCA2Q9BTY2 467 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 ABCG4Q9H172 646 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 TCEAL2Q9H3H9 227 aaPredicted RBP14.37□□□□□ -0.11
NELFE-201ENST00000375425 USP29Q9HBJ7 922 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 PCDH12Q9NPG4 1184 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 MYO1AQ9UBC5 1043 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 PNMA8BQ9ULN7 279 aaPredicted RBP14.37□□□□□ -0.11
NELFE-201ENST00000375425 COQ6Q9Y2Z9 468 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 BPTFQ12830 3046 aa14.37□□□□□ -0.11
NELFE-201ENST00000375425 TOR1BO14657 336 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 RIOK3O14730 519 aaKnown RBP14.36□□□□□ -0.11
NELFE-201ENST00000375425 TLX3O43711 291 aaPredicted RBP14.36□□□□□ -0.11
NELFE-201ENST00000375425 LRCH4O75427 683 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 GCATO75600 419 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 GP1BAP07359 652 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 RGRP47804 291 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 C1orf61Q13536 156 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 LRRC14Q15048 493 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 CDKN3Q16667 212 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 PRRT3Q5FWE3 981 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 CFAP58Q5T655 872 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 CDCP2Q5VXM1 449 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 AFMIDQ63HM1 303 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 ZCCHC8Q6NZY4 707 aaKnown RBP14.36□□□□□ -0.11
NELFE-201ENST00000375425 ERAP2Q6P179 960 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 ARHGAP36Q6ZRI8 547 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 SRLQ86TD4 932 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 PSTKQ8IV42 348 aaKnown RBP14.36□□□□□ -0.11
NELFE-201ENST00000375425 RBFAQ8N0V3 343 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 IFI44Q8TCB0 444 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 IL12RB2Q99665 862 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 ISCUQ9H1K1 167 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 MRPL47Q9HD33 250 aaKnown RBP14.36□□□□□ -0.11
NELFE-201ENST00000375425 EVA1BQ9NVM1 165 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 CWC15Q9P013 229 aaKnown RBP14.36□□□□□ -0.11
NELFE-201ENST00000375425 SPASTQ9UBP0 616 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 SALL4Q9UJQ4 1053 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 SCINQ9Y6U3 715 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 ADAMTS20P59510 1910 aa14.36□□□□□ -0.11
NELFE-201ENST00000375425 TSPAN11A1L157 253 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 CPED1A4D0V7 1026 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 DFFAO00273 331 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 TPP1O14773 563 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 BRINP1O60477 761 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 PRKCGP05129 697 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 MYBL1P10243 752 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 CSNK1DP48730 415 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 HCAR3P49019 387 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 ADKP55263 362 aaKnown RBP14.35□□□□□ -0.11
NELFE-201ENST00000375425 PPARDQ03181 441 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 NSUN2Q08J23 767 aaKnown RBP eCLIP14.35□□□□□ -0.11
NELFE-201ENST00000375425 IRF4Q15306 451 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 WSCD2Q2TBF2 565 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 FAXCQ5TGI0 409 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 BRAT1Q6PJG6 821 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 ZSWIM9Q86XI8 627 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 TP53INP2Q8IXH6 220 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 PHACTR4Q8IZ21 702 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 NPWQ8N729 165 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 TRIM11Q96F44 468 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 TUBGCP5Q96RT8 1024 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 SLC13A1Q9BZW2 595 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 ATP13A3Q9H7F0 1226 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 SP110Q9HB58 689 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 NCKIPSDQ9NZQ3 722 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 APOBEC3BQ9UH17 382 aaKnown RBP14.35□□□□□ -0.11
NELFE-201ENST00000375425 PCDHB1Q9Y5F3 818 aa14.35□□□□□ -0.11
NELFE-201ENST00000375425 EME2A4GXA9 379 aaPredicted RBP14.34□□□□□ -0.11
NELFE-201ENST00000375425 C6P13671 934 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 IL1R2P27930 398 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 ITPKBP27987 946 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 PCK1P35558 622 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 EIF2S3P41091 472 aaKnown RBP14.34□□□□□ -0.11
NELFE-201ENST00000375425 LIG3P49916 1009 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 PEX5P50542 639 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 ZNF135P52742 658 aaPredicted RBP14.34□□□□□ -0.11
NELFE-201ENST00000375425 IL10RBQ08334 325 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 DPYSQ14117 519 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 RFTN1Q14699 578 aaPredicted RBP14.34□□□□□ -0.11
NELFE-201ENST00000375425 FIGNQ5HY92 759 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 GUSBP11Q6P575 273 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 MACC1Q6ZN28 852 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 MAPK15Q8TD08 544 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 FGF11Q92914 225 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 DEPDC7Q96QD5 511 aa14.34□□□□□ -0.11
NELFE-201ENST00000375425 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.34□□□□□ -0.11
NELFE-201ENST00000375425 CINPQ9BW66 212 aaPredicted RBP14.34□□□□□ -0.11
NELFE-201ENST00000375425 ZWILCHQ9H900 591 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms