RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 ARSIQ5FYB1 569 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 SIRPB2Q5JXA9 342 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 CERCAMQ5T4B2 595 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 ARMC12Q5T9G4 340 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 FBXO38Q6PIJ6 1188 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 ZBED8Q8IZ13 594 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 IL17RCQ8NAC3 791 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 TUBGCP5Q96RT8 1024 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 TRIB3Q96RU7 358 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 SUV39H2Q9H5I1 410 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 ARNT2Q9HBZ2 717 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 ARGLU1Q9NWB6 273 aaPredicted RBP11.04□□□□□ -0.64
BRCC3-204ENST00000369462 BFARQ9NZS9 450 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 SUN2Q9UH99 717 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 IL36AQ9UHA7 158 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 MUTYHQ9UIF7 546 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 WASF2Q9Y6W5 498 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 TRAFD1O14545 582 aaPredicted RBP11.04□□□□□ -0.64
BRCC3-204ENST00000369462 PPFIA2O75334 1257 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 CTSLP07711 333 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 ATXN1LP0C7T5 689 aaKnown RBP11.04□□□□□ -0.64
BRCC3-204ENST00000369462 H2AFXP16104 143 aaPredicted RBP11.04□□□□□ -0.64
BRCC3-204ENST00000369462 MGAT1P26572 445 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 EPHB1P54762 984 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 PRKCQQ04759 706 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 ELAVL3Q14576 367 aaKnown RBP11.04□□□□□ -0.64
BRCC3-204ENST00000369462 GRM3Q14832 879 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 POM121L1PQ3SYA9 428 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 FBXO43Q4G163 708 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 CASC4Q6P4E1 433 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 TMC3Q7Z5M5 1100 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 ANKMY2Q8IV38 441 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 SIX5Q8N196 739 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 AGGF1Q8N302 714 aaeCLIP11.04□□□□□ -0.64
BRCC3-204ENST00000369462 MPP5Q8N3R9 675 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 TXNDC5Q8NBS9 432 aaKnown RBP11.04□□□□□ -0.64
BRCC3-204ENST00000369462 LPCAT1Q8NF37 534 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 NECAB3Q96P71 396 aaPredicted RBP11.04□□□□□ -0.64
BRCC3-204ENST00000369462 ADGRE3Q9BY15 652 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 PRSS16Q9NQE7 514 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 MAD1L1Q9Y6D9 718 aa11.04□□□□□ -0.64
BRCC3-204ENST00000369462 SDR42E2A6NKP2 422 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 HTRA2O43464 458 aaPredicted RBP11.03□□□□□ -0.64
BRCC3-204ENST00000369462 SYNCRIPO60506 623 aaKnown RBP11.03□□□□□ -0.64
BRCC3-204ENST00000369462 SOCS5O75159 536 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 PGLSO95336 258 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 KLF8O95600 359 aaPredicted RBP11.03□□□□□ -0.64
BRCC3-204ENST00000369462 PIRTP0C851 137 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 HLA-DPA1P20036 260 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 MAGEA4P43358 317 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 POU6F1Q14863 301 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 CFAP58Q5T655 872 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 SDE2Q6IQ49 451 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 GDPD4Q6W3E5 623 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 UBALD2Q8IYN6 164 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 OR8D1Q8WZ84 308 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 SIGLEC10Q96LC7 697 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 C9orf72Q96LT7 481 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 KLHL32Q96NJ5 620 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 FAM129BQ96TA1 746 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 ANKRD66B4E2M5 251 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 E7ESA3 106 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 FZD6O60353 706 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 PRKCGP05129 697 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 FGF1P05230 155 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 CHRM1P11229 460 aaPredicted RBP11.03□□□□□ -0.64
BRCC3-204ENST00000369462 SLC8A1P32418 973 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 ELK3P41970 407 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 MRPS21P82921 87 aaKnown RBP11.03□□□□□ -0.64
BRCC3-204ENST00000369462 SLMAPQ14BN4 828 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 DNAJC21Q5F1R6 531 aaKnown RBP11.03□□□□□ -0.64
BRCC3-204ENST00000369462 BEND6Q5SZJ8 279 aaPredicted RBP11.03□□□□□ -0.64
BRCC3-204ENST00000369462 IGDCC3Q8IVU1 814 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 RPLP0P6Q8NHW5 317 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 PYROXD1Q8WU10 500 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 HNRNPLLQ8WVV9 542 aaKnown RBP11.03□□□□□ -0.64
BRCC3-204ENST00000369462 SHDQ96IW2 340 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 ZNF641Q96N77 438 aaPredicted RBP11.03□□□□□ -0.64
BRCC3-204ENST00000369462 SMIM14Q96QK8 99 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 WDR83Q9BRX9 315 aaKnown RBP11.03□□□□□ -0.64
BRCC3-204ENST00000369462 SEMA4AQ9H3S1 761 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 SYBUQ9NX95 663 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 SARDHQ9UL12 918 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 CHMP2BQ9UQN3 213 aa11.03□□□□□ -0.64
BRCC3-204ENST00000369462 MTF2Q9Y483 593 aaPredicted RBP11.03□□□□□ -0.64
BRCC3-204ENST00000369462 ANKRD36A6QL64 1941 aa11.02□□□□□ -0.64
BRCC3-204ENST00000369462 BDP1A6H8Y1 2624 aa11.02□□□□□ -0.64
BRCC3-204ENST00000369462 AP3B1O00203 1094 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 KPNA3O00505 521 aaPredicted RBP11.02□□□□□ -0.65
BRCC3-204ENST00000369462 ALOX15BO15296 676 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 EIF3HO15372 352 aaKnown RBP eCLIP11.02□□□□□ -0.65
BRCC3-204ENST00000369462 ADAM23O75077 832 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 IL1BP01584 269 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 PRNPP04156 253 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 NPY2RP49146 381 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 UBXN2BQ14CS0 331 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 KYNUQ16719 465 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 CCDC38Q502W7 563 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 CEP128Q6ZU80 1094 aa11.02□□□□□ -0.65
BRCC3-204ENST00000369462 TRMT11Q7Z4G4 463 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms