RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 TRNP1Q6NT89 227 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 UGT3A1Q6NUS8 523 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 CNSTQ6PJW8 725 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 MYO1HQ8N1T3 1032 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 MIER2Q8N344 545 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 DCBLD1Q8N8Z6 715 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 GANCQ8TET4 914 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 WDR60Q8WVS4 1066 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 HGH1Q9BTY7 390 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 STN1Q9H668 368 aaKnown RBP8.52□□□□□ -1.05
PTPRK-206ENST00000368215 YY1AP1Q9H869 796 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 GTF2IRD1Q9UHL9 959 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 OR51F1A6NGY5 319 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 MOXD2PA6NHM9 499 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 SYNCRIPO60506 623 aaKnown RBP8.52□□□□□ -1.05
PTPRK-206ENST00000368215 CLPTM1O96005 669 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 ALDH1A1P00352 501 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 PFKMP08237 780 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 PRKCZQ05513 592 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 LSM12Q3MHD2 195 aaKnown RBP8.52□□□□□ -1.05
PTPRK-206ENST00000368215 SLC9B1Q4ZJI4 515 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 HECTD2Q5U5R9 776 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 SLC24A5Q71RS6 500 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 DHFR2Q86XF0 187 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 SPDYE1Q8NFV5 336 aaPredicted RBP8.52□□□□□ -1.05
PTPRK-206ENST00000368215 OR7D4Q8NG98 312 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 FAM162AQ96A26 154 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 NTAN1Q96AB6 310 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 TMEM209Q96SK2 561 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 SLC25A23Q9BV35 468 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 PKD2L2Q9NZM6 624 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 SLC2A6Q9UGQ3 507 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 ATP11BQ9Y2G3 1177 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 AK5Q9Y6K8 562 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 ZNF839A8K0R7 811 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 CD3EAPO15446 510 aaKnown RBP8.52□□□□□ -1.05
PTPRK-206ENST00000368215 SLC2A4P14672 509 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 CTPS1P17812 591 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 RPL17P18621 184 aaKnown RBP8.52□□□□□ -1.05
PTPRK-206ENST00000368215 MAP4P27816 1152 aaKnown RBP8.52□□□□□ -1.05
PTPRK-206ENST00000368215 SCNN1AP37088 669 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 GPR15P49685 360 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 ATP6AP1LQ52LC2 224 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 HECTD3Q5T447 861 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 TTC33Q6PID6 262 aaPredicted RBP8.52□□□□□ -1.05
PTPRK-206ENST00000368215 EFL1Q7Z2Z2 1120 aaKnown RBP8.52□□□□□ -1.05
PTPRK-206ENST00000368215 CUZD1Q86UP6 607 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 PLD6Q8N2A8 252 aaKnown RBP8.52□□□□□ -1.05
PTPRK-206ENST00000368215 SMG8Q8ND04 991 aaKnown RBP8.52□□□□□ -1.05
PTPRK-206ENST00000368215 FAM156AQ8NDB6 213 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 HEXDCQ8WVB3 486 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 IRGQQ8WZA9 623 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 NRBF2Q96F24 287 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 STX18Q9P2W9 335 aaKnown RBP8.52□□□□□ -1.05
PTPRK-206ENST00000368215 CDH22Q9UJ99 828 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 DNMT3LQ9UJW3 386 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 RPL26L1Q9UNX3 145 aaKnown RBP8.52□□□□□ -1.05
PTPRK-206ENST00000368215 PCDHB12Q9Y5F1 795 aa8.52□□□□□ -1.05
PTPRK-206ENST00000368215 KCNU1A8MYU2 1149 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 HLA-DQB2P05538 268 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 DLDP09622 509 aaKnown RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 SLC1A2P43004 574 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 TUFMP49411 452 aaKnown RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 ARHGDIAP52565 204 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 MSLNQ13421 630 aaPredicted RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 SYTL3Q4VX76 610 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 VARS2Q5ST30 1063 aaKnown RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 FAM45BPQ6NSW5 357 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 RP9Q8TA86 221 aaKnown RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 FAM45AQ8TCE6 357 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 TMEM79Q9BSE2 394 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 RUBCNLQ9H714 662 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 MIOSQ9NXC5 875 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 PLK2Q9NYY3 685 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 PRKAG3Q9UGI9 489 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 MYO1GB0I1T2 1018 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 SEPT4O43236 478 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 TBX10O75333 385 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 PGM3O95394 542 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 LINC00032P0C843 101 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 CCR10P46092 362 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 EPHB3P54753 998 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 LINGO4Q6UY18 593 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 AMIGO2Q86SJ2 522 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 GPSM1Q86YR5 675 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 LRRC49Q8IUZ0 686 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 RTL3Q8N8U3 475 aaKnown RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 OR4K2Q8NGD2 314 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 OR4L1Q8NH43 312 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 DNAJB14Q8TBM8 379 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 RDH11Q8TC12 318 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 KCTD13Q8WZ19 329 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 BTN2A3PQ96KV6 586 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 PNPLA8Q9NP80 782 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 SLC7A8Q9UHI5 535 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 TRAF6Q9Y4K3 522 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 ABLIM1O14639 778 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 SNRPB2P08579 225 aaKnown RBP8.51□□□□□ -1.05
PTPRK-206ENST00000368215 HGFP14210 728 aa8.51□□□□□ -1.05
PTPRK-206ENST00000368215 GCAP28676 217 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms