RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 RPP40O75818 363 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PIGNO95427 931 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 NDST3O95803 873 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ITGA2P17301 1181 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ATP6V1B2P21281 511 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 SMIM11AP58511 58 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 IFI35P80217 286 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 HGSNATQ68CP4 663 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PPP4R4Q6NUP7 873 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 GPRIN3Q6ZVF9 776 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 GPR141Q7Z602 305 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 SLC41A1Q8IVJ1 513 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 SLC22A17Q8WUG5 538 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ELMO3Q96BJ8 720 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ZFYVE19Q96K21 471 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 SLC25A51Q9H1U9 297 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ALG9Q9H6U8 611 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ACP6Q9NPH0 428 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 C8orf4Q9NR00 106 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ADAM30Q9UKF2 790 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 RPL26L1Q9UNX3 145 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 VWA7Q9Y334 891 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PCDHB9Q9Y5E1 797 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PTPRJQ12913 1337 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ARVCFO00192 962 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 WNT7AO00755 349 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 MATN3O15232 486 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 NOL4O94818 638 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 C22orf31O95567 290 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 AP2A1O95782 977 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 LDLRP01130 860 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 SNRPB2P08579 225 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 SLC35G4P0C7Q5 338 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ZSCAN5DPP0CG00 497 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 IL10RBQ08334 325 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 GRB14Q14449 540 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 RD3Q7Z3Z2 195 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 SLC44A2Q8IWA5 706 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 MICU2Q8IYU8 434 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 RP9Q8TA86 221 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 CNBD2Q96M20 576 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 AGO3Q9H9G7 860 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 CCDC167Q9P0B6 97 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 LEF1Q9UJU2 399 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 FBXO5Q9UKT4 447 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 MRPS17Q9Y2R5 130 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 SQORQ9Y6N5 450 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 C4BP0C0L5 1744 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 NWD2Q9ULI1 1742 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 A0A1B0GW55 424 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 RGSL1A5PLK6 1076 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 KCNU1A8MYU2 1149 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 MRASO14807 208 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 DUX4L2P0CJ85 424 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 DUX4L3P0CJ86 424 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 DUX4L4P0CJ87 422 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 DUX4L5P0CJ88 424 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 DUX4L6P0CJ89 424 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 DUX4L7P0CJ90 424 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 TFEBP19484 476 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 GRIA4P48058 902 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ACLYP53396 1101 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 WNT3AP56704 352 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 TAS2R40P59535 323 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ARHGAP1Q07960 439 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 HSPA14Q0VDF9 509 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 AUHQ13825 339 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 GSTA3Q16772 222 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PTPRNQ16849 979 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 SLC10A6Q3KNW5 377 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 LSM12Q3MHD2 195 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ZDHHC13Q8IUH4 622 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 MAB21L3Q8N8X9 362 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 CLP1Q92989 425 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 C11orf84Q9BUA3 381 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ACE2Q9BYF1 805 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 YIPF3Q9GZM5 350 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 GMIPQ9P107 970 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 DUX4Q9UBX2 424 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 SFMBT1Q9UHJ3 866 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ZNF180Q9UJW8 692 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 MTF2Q9Y483 593 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 FAM237BA0A1B0GVD1 139 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ACSL4O60488 711 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ATG13O75143 517 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ASLP04424 464 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 AMD1P17707 334 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PIK3R1P27986 724 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 ABL2P42684 1182 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 CLK3P49761 638 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PNLIPRP1P54315 467 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 TRAF2Q12933 501 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PLPP4Q5VZY2 271 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PLEKHM3Q6ZWE6 761 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 COLGALT2Q8IYK4 626 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 CHPFQ8IZ52 775 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 RGL4Q8IZJ4 473 aa4.89□□□□□ -1.63
SCN3A-202ENST00000360093 C12orf50Q8NA57 414 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 PTCD3Q96EY7 689 aaKnown RBP4.89□□□□□ -1.63
SCN3A-202ENST00000360093 FETUBQ9UGM5 382 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms