RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 FICDQ9BVA6 458 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 UBE2ZQ9H832 354 aaPredicted RBP14.84□□□□□ -0.03
CXCL12-201ENST00000343575 SLCO3A1Q9UIG8 710 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 SLC27A6Q9Y2P4 619 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 NUMBLQ9Y6R0 609 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 LOC285095A0A1B0GVY8 99 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 PSMD3O43242 534 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 MBTPS2O43462 519 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 C1QAP02745 245 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 BMP1P13497 986 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 TPH1P17752 444 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 ATP5DP30049 168 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 OPRD1P41143 372 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 DGKGP49619 791 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 SCNN1BP51168 640 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 SARNPP82979 210 aaKnown RBP14.84□□□□□ -0.03
CXCL12-201ENST00000343575 RUNX3Q13761 415 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 NAA25Q14CX7 972 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 PCSK7Q16549 785 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 ATXN7L2Q5T6C5 722 aaPredicted RBP14.84□□□□□ -0.03
CXCL12-201ENST00000343575 MBLAC2Q68D91 279 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 NAPEPLDQ6IQ20 393 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 CAPN12Q6ZSI9 719 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 CEP128Q6ZU80 1094 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 TTC8Q8TAM2 541 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 SORCS1Q8WY21 1168 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 MYO19Q96H55 970 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 NUDCD1Q96RS6 583 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 TRIB3Q96RU7 358 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 ARNT2Q9HBZ2 717 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 SYBUQ9NX95 663 aa14.84□□□□□ -0.03
CXCL12-201ENST00000343575 PRRT4C9JH25 899 aa14.83□□□□□ -0.04
CXCL12-201ENST00000343575 INSIG1O15503 277 aa14.83□□□□□ -0.04
CXCL12-201ENST00000343575 PRLP01236 227 aa14.83□□□□□ -0.04
CXCL12-201ENST00000343575 ATXN1LP0C7T5 689 aaKnown RBP14.83□□□□□ -0.04
CXCL12-201ENST00000343575 DMC1Q14565 340 aa14.83□□□□□ -0.04
CXCL12-201ENST00000343575 TNFAIP8L3Q5GJ75 292 aa14.83□□□□□ -0.04
CXCL12-201ENST00000343575 AHI1Q8N157 1196 aa14.83□□□□□ -0.04
CXCL12-201ENST00000343575 BBS5Q8N3I7 341 aa14.83□□□□□ -0.04
CXCL12-201ENST00000343575 ZNF557Q8N988 423 aaPredicted RBP14.83□□□□□ -0.04
CXCL12-201ENST00000343575 LRRC39Q96DD0 335 aa14.83□□□□□ -0.04
CXCL12-201ENST00000343575 MRGPRX3Q96LB0 322 aa14.83□□□□□ -0.04
CXCL12-201ENST00000343575 EBNA1BP2Q99848 306 aaKnown RBP14.83□□□□□ -0.04
CXCL12-201ENST00000343575 SELENOSQ9BQE4 189 aa14.83□□□□□ -0.04
CXCL12-201ENST00000343575 MYLKQ15746 1914 aa14.83□□□□□ -0.04
CXCL12-201ENST00000343575 MIA3Q5JRA6 1907 aa14.83□□□□□ -0.04
CXCL12-201ENST00000343575 ANTXRLA6NF34 631 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 SDR42E2A6NKP2 422 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 C2CD4DB7Z1M9 353 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 ABHD2P08910 425 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 NQO1P15559 274 aaKnown RBP14.82□□□□□ -0.04
CXCL12-201ENST00000343575 GDI1P31150 447 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 GJA4P35212 333 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 RHOAP61586 193 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 ECT2LQ008S8 904 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 CDH17Q12864 832 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 SLC14A2Q15849 920 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 PTPRNQ16849 979 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 NCEH1Q6PIU2 408 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 C3orf62Q6ZUJ4 267 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 LINC00523Q86TU6 105 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 LRRC34Q8IZ02 419 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 ATP11CQ8NB49 1132 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 NXPE3Q969Y0 559 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 PPP1R2P1Q96PQ5 205 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 TRMT61BQ9BVS5 477 aaKnown RBP14.82□□□□□ -0.04
CXCL12-201ENST00000343575 TM6SF2Q9BZW4 377 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 ANKRD36A6QL64 1941 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 KIAA1549LQ6ZVL6 1849 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 PIAS1O75925 651 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 WFS1O76024 890 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 SERPINF2P08697 491 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 SKIV2L2P42285 1042 aaKnown RBP14.82□□□□□ -0.04
CXCL12-201ENST00000343575 GEMIN4P57678 1058 aaKnown RBP14.82□□□□□ -0.04
CXCL12-201ENST00000343575 SMAD4Q13485 552 aaKnown RBP14.82□□□□□ -0.04
CXCL12-201ENST00000343575 SLC1A5Q15758 541 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 UNC5AQ6ZN44 842 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 DNAAF3Q8N9W5 541 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 MDM1Q8TC05 714 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 CYB5D2Q8WUJ1 264 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 TTC25Q96NG3 672 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 FSD1LQ9BXM9 530 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 TNKS2Q9H2K2 1166 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 ZC3H7BQ9UGR2 993 aaKnown RBP14.82□□□□□ -0.04
CXCL12-201ENST00000343575 ERVW-1Q9UQF0 538 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 PCDHGC4Q9Y5F7 938 aa14.82□□□□□ -0.04
CXCL12-201ENST00000343575 SNX3O60493 162 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 PDHA1P08559 390 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 VIMP08670 466 aaKnown RBP14.81□□□□□ -0.04
CXCL12-201ENST00000343575 GKP32189 559 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 CCNG1P51959 295 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 SULT2A1Q06520 285 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 CDK18Q07002 472 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 TRAF2Q12933 501 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 GALNTL6Q49A17 601 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 SIRPB2Q5JXA9 342 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 STEAP4Q687X5 459 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 GPR153Q6NV75 609 aa14.81□□□□□ -0.04
CXCL12-201ENST00000343575 APLFQ8IW19 511 aaPredicted RBP14.81□□□□□ -0.04
CXCL12-201ENST00000343575 YAF2Q8IY57 180 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms