RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 SLC9A9Q8IVB4 645 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 OR52K2Q8NGK3 314 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 CLEC4CQ8WTT0 213 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 HEPHQ9BQS7 1158 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 TRIM62Q9BVG3 475 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 ZMYND15Q9H091 742 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 KBTBD4Q9NVX7 518 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 DMAC2Q9NW81 257 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 OR51B4Q9Y5P0 310 aa11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 OAS3Q9Y6K5 1087 aaKnown RBP11.15□□□□□ -0.62
PTP4A1-207ENST00000639568 SMAD6O43541 496 aaKnown RBP11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 SNAP91O60641 907 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 CLDN11O75508 207 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 TM7SF2O76062 418 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 PDGFAP04085 211 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 NR3C1P04150 777 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 SLC2A3P11169 496 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 KRT13P13646 458 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 LIMK2P53671 638 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 PMS2P54278 862 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 C1orf220Q5T0J3 134 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 FBXL22Q6P050 247 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 PMF1Q6P1K2 205 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 LINGO4Q6UY18 593 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 UNC13DQ70J99 1090 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 OR4D9Q8NGE8 314 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 KIAA1524Q8TCG1 905 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 RBM15Q96T37 977 aaKnown RBP eCLIP11.14□□□□□ -0.634e-6■■□□□ 13.1
PTP4A1-207ENST00000639568 PRMT1Q99873 361 aaKnown RBP11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 ZPBPQ9BS86 351 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 CUEDC2Q9H467 287 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 SLAMF7Q9NQ25 335 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 MBNL1Q9NR56 388 aaKnown RBP11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 OCIAD1Q9NX40 245 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 VPS51Q9UID3 782 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 ITM2BQ9Y287 266 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 MRPS18BQ9Y676 258 aaKnown RBP11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 WASF2Q9Y6W5 498 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 PCNX1Q96RV3 2341 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 ESPL1Q14674 2120 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 ABCA2Q9BZC7 2435 aa11.14□□□□□ -0.63
PTP4A1-207ENST00000639568 SDK2Q58EX2 2172 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 CSMD2Q7Z408 3487 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 C16orf96A6NNT2 1141 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 SART1O43290 800 aaKnown RBP11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 DIAPH2O60879 1101 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 MMP20O60882 483 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 LRCH4O75427 683 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 SORBS2O94875 1100 aaKnown RBP11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 FYNP06241 537 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 TRIM49P0CI25 452 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 TRIM49CP0CI26 452 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 PYGBP11216 843 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 VDRP11473 427 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 MPSTP25325 297 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 PPM1FP49593 454 aaPredicted RBP11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 CEBPZQ03701 1054 aaKnown RBP11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 PPP3CAQ08209 521 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 ELOAQ14241 798 aaKnown RBP11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 NFATC4Q14934 902 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 KLHL40Q2TBA0 621 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 ZRANB3Q5FWF4 1079 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 SPECC1LQ69YQ0 1117 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 SP5Q6BEB4 398 aaPredicted RBP11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 CEACAM20Q6UY09 585 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 INTS8Q75QN2 995 aaKnown RBP11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 RYBPQ8N488 228 aaPredicted RBP11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 ESX1Q8N693 406 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 CXorf40AQ8TE69 158 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 SLC35F5Q8WV83 523 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 RTP4Q96DX8 246 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 CTRCQ99895 268 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 ZDHHC6Q9H6R6 413 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 MRPL40Q9NQ50 206 aaKnown RBP11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 KIAA1257Q9ULG3 409 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 VANGL2Q9ULK5 521 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 TBC1D30Q9Y2I9 924 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 NIPBLQ6KC79 2804 aaeCLIP11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 SCN8AQ9UQD0 1980 aa11.13□□□□□ -0.63
PTP4A1-207ENST00000639568 CDC14CA4D256 554 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 O00370 1275 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 STK17BO94768 372 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 RHOCP08134 193 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 CD1CP29017 333 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 CCR1P32246 355 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 STAT5AP42229 794 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 ABL2P42684 1182 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 CCNHP51946 323 aaPredicted RBP11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 YWHAEP62258 255 aaKnown RBP11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 AUHQ13825 339 aaKnown RBP11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 LRRC14Q15048 493 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 PRR30Q53SZ7 412 aaPredicted RBP11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 CARD16Q5EG05 197 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 SYPL2Q5VXT5 272 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 KRT39Q6A163 491 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 CNNM4Q6P4Q7 775 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 TTC7BQ86TV6 843 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 IRF2BP1Q8IU81 584 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 SFTPA2Q8IWL1 248 aa11.12□□□□□ -0.63
PTP4A1-207ENST00000639568 PCDH20Q8N6Y1 951 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms