RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 PKDCCQ504Y2 493 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 TXNRD3NBQ6F5E7 133 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 ALKBH5Q6P6C2 394 aaKnown RBP5.07□□□□□ -1.6
SYCP1-209ENST00000613524 IRF2BP2Q7Z5L9 587 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 TADA2BQ86TJ2 420 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 VPS36Q86VN1 386 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 GPR65Q8IYL9 337 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 TTC39CQ8N584 583 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 ATP11CQ8NB49 1132 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 CLRN3Q8NCR9 226 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 MDGA1Q8NFP4 955 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 OR52K2Q8NGK3 314 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 FAM122AQ96E09 287 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 HSFY1Q96LI6 401 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 PRICKLE1Q96MT3 831 aaPredicted RBP5.07□□□□□ -1.6
SYCP1-209ENST00000613524 SERPINB11Q96P15 392 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 ERGIC2Q96RQ1 377 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 NUP85Q9BW27 656 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 CCDC86Q9H6F5 360 aaKnown RBP5.07□□□□□ -1.6
SYCP1-209ENST00000613524 GOLGA6AQ9NYA3 693 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 SEPT10Q9P0V9 454 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 ARHGAP20Q9P2F6 1191 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 KIAA1257Q9ULG3 409 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 STAP1Q9ULZ2 295 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 PACSIN2Q9UNF0 486 aaPredicted RBP5.07□□□□□ -1.6
SYCP1-209ENST00000613524 MAPRE3Q9UPY8 281 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 DUSP10Q9Y6W6 482 aa5.07□□□□□ -1.6
SYCP1-209ENST00000613524 GTPBP10A4D1E9 387 aaKnown RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 TTC34A8MYJ7 566 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 KPNA3O00505 521 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 SLC9A3R1O14745 358 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 ZNF185O15231 689 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 DDX3YO15523 660 aaKnown RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 GFRA3O60609 400 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 KCNH1O95259 989 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 B3GALT4O96024 378 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 ACVRL1P37023 503 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 IL12RB1P42701 662 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 ACADSBP45954 432 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 PSMD8P48556 350 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 PPM1FP49593 454 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 RENBPP51606 427 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 SLC7A9P82251 487 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 LMAN2Q12907 356 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 CA9Q16790 459 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 DPY19L1Q2PZI1 675 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 EFHC1Q5JVL4 640 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 ADGRF1Q5T601 910 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 DPY19L2P1Q6NXN4 242 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 LYSMD3Q7Z3D4 306 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 PHACTR4Q8IZ21 702 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 ARHGAP18Q8N392 663 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 TERB1Q8NA31 727 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 PPP1R35Q8TAP8 253 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 BHLHE41Q9C0J9 482 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 C10orf88Q9H8K7 445 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 RSPH14Q9UHP6 348 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 GMEB2Q9UKD1 530 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 GPR55Q9Y2T6 319 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 HS3ST4Q9Y661 456 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 SAR1BQ9Y6B6 198 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 ANKRD11Q6UB99 2663 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 CACNA1BQ00975 2339 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 BOD1L1Q8NFC6 3051 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 K7EQS6 105 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 MAN2B1O00754 1011 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 SHOXO15266 292 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 IRAK2O43187 625 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 GDF9O60383 454 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 DLX3O60479 287 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 SHOX2O60902 331 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 GJB3O75712 270 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 UBOX5O94941 541 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 FSBPO95073 299 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 RHOCP08134 193 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 POLR2EP19388 210 aaKnown RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 GPD1P21695 349 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 BCKDHBP21953 392 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 PRKCHP24723 683 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 CHKAP35790 457 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 SLC19A1P41440 591 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 PTGER3P43115 390 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 GALCP54803 685 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 JAM2P57087 298 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 ST8SIA6P61647 398 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 NHLH1Q02575 133 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 GSTM4Q03013 218 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 ZNF177Q13360 481 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 SF3A2Q15428 464 aaKnown RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 STILQ15468 1287 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 CCDC14Q49A88 953 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 FAM133BQ5BKY9 247 aaKnown RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 MS4A13Q5J8X5 152 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 RAB41Q5JT25 222 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 ARMC3Q5W041 872 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 TMEM215Q68D42 235 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 MBLAC2Q68D91 279 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 CCNI2Q6ZMN8 369 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 ASCL5Q7RTU5 278 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 916 ms