RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 GPR27Q9NS67 375 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 SPEGQ15772 3267 aa18.43■□□□□ 0.54
VCX3A-203ENST00000612369 PALMO75781 387 aa18.42■□□□□ 0.54
VCX3A-203ENST00000612369 IL10RBQ08334 325 aa18.42■□□□□ 0.54
VCX3A-203ENST00000612369 NSUN2Q08J23 767 aaKnown RBP eCLIP18.42■□□□□ 0.54
VCX3A-203ENST00000612369 ELP6Q0PNE2 266 aa18.42■□□□□ 0.54
VCX3A-203ENST00000612369 CCDC122Q5T0U0 273 aa18.42■□□□□ 0.54
VCX3A-203ENST00000612369 ARHGAP12Q8IWW6 846 aa18.42■□□□□ 0.54
VCX3A-203ENST00000612369 SLC22A18ASQ8N1D0 253 aa18.42■□□□□ 0.54
VCX3A-203ENST00000612369 CXorf40AQ8TE69 158 aa18.42■□□□□ 0.54
VCX3A-203ENST00000612369 KLF6Q99612 283 aaPredicted RBP18.42■□□□□ 0.54
VCX3A-203ENST00000612369 NUP85Q9BW27 656 aa18.42■□□□□ 0.54
VCX3A-203ENST00000612369 C1QTNF7Q9BXJ2 289 aa18.42■□□□□ 0.54
VCX3A-203ENST00000612369 SUV39H2Q9H5I1 410 aa18.42■□□□□ 0.54
VCX3A-203ENST00000612369 SP110Q9HB58 689 aa18.42■□□□□ 0.54
VCX3A-203ENST00000612369 ANAPC7Q9UJX3 599 aa18.42■□□□□ 0.54
VCX3A-203ENST00000612369 ASPMQ8IZT6 3477 aa18.42■□□□□ 0.54
VCX3A-203ENST00000612369 PTPRBP23467 1997 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 TSPAN11A1L157 253 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 POM121BA6NF01 834 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 MYO1FO00160 1098 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 RAD51BO15315 384 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 INSIG1O15503 277 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 SPINT1O43278 529 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 TM7SF2O76062 418 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 RARAP10276 462 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 TIMP2P16035 220 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 XPAP23025 273 aaPredicted RBP18.41■□□□□ 0.54
VCX3A-203ENST00000612369 DGKAP23743 735 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 IL1R2P27930 398 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 ILKQ13418 452 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 TRIM14Q14142 442 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 SMAD1Q15797 465 aaKnown RBP18.41■□□□□ 0.54
VCX3A-203ENST00000612369 HS1BP3Q53T59 392 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 TMCO4Q5TGY1 634 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 BRAT1Q6PJG6 821 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 POLNQ7Z5Q5 900 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 PTAR1Q7Z6K3 402 aaPredicted RBP18.41■□□□□ 0.54
VCX3A-203ENST00000612369 NETO2Q8NC67 525 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 TSC1Q92574 1164 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 EXOC2Q96KP1 924 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 ZNF599Q96NL3 588 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 IPO11Q9UI26 975 aaKnown RBP18.41■□□□□ 0.54
VCX3A-203ENST00000612369 GGT7Q9UJ14 662 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 ZMIZ1Q9ULJ6 1067 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 ITM2BQ9Y287 266 aa18.41■□□□□ 0.54
VCX3A-203ENST00000612369 ARID1BQ8NFD5 2236 aaPredicted RBP18.4■□□□□ 0.54
VCX3A-203ENST00000612369 SPTY2D1-AS1A0A0U1RR47 76 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 DFFAO00273 331 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 TOR1BO14657 336 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 RFPL3O75679 317 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 CKMT2P17540 419 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 RENBPP51606 427 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 HNRNPKP61978 463 aaKnown RBP eCLIP18.4■□□□□ 0.54
VCX3A-203ENST00000612369 ZNF211Q13398 564 aaPredicted RBP18.4■□□□□ 0.54
VCX3A-203ENST00000612369 UGP2Q16851 508 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 SMTNL2Q2TAL5 461 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 TMEM52BQ4KMG9 183 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 CFAP58Q5T655 872 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 SPECC1LQ69YQ0 1117 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 SRLQ86TD4 932 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 TMPRSS12Q86WS5 348 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 SLC25A45Q8N413 288 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 NPWQ8N729 165 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 ZCCHC14Q8WYQ9 949 aaKnown RBP18.4■□□□□ 0.54
VCX3A-203ENST00000612369 HSPH1Q92598 858 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 CENPTQ96BT3 561 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 CINPQ9BW66 212 aaPredicted RBP18.4■□□□□ 0.54
VCX3A-203ENST00000612369 ATP13A3Q9H7F0 1226 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.4■□□□□ 0.54
VCX3A-203ENST00000612369 LCMT1Q9UIC8 334 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 NENFQ9UMX5 172 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 IGF2RP11717 2491 aa18.4■□□□□ 0.54
VCX3A-203ENST00000612369 NEMP2A6NFY4 417 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 SDC3O75056 442 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 PIAS2O75928 621 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 PIGNO95427 931 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 ALPPL2P10696 532 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 TCF4P15884 667 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 SERPINA4P29622 427 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 SERPINB6P35237 376 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 ACADVLP49748 655 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 PFN3P60673 137 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 YPEL5P62699 121 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 SLC25A11Q02978 314 aaKnown RBP18.39■□□□□ 0.53
VCX3A-203ENST00000612369 FZD2Q14332 565 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 HADHQ16836 314 aaKnown RBP18.39■□□□□ 0.53
VCX3A-203ENST00000612369 ERAP2Q6P179 960 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 TMCO3Q6UWJ1 677 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 PARGQ86W56 976 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 TSEN2Q8NCE0 465 aaKnown RBP18.39■□□□□ 0.53
VCX3A-203ENST00000612369 OR8K1Q8NGG5 319 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 OR4C6Q8NH72 309 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 CSPG4P5Q96PW8 444 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 PSKH2Q96QS6 385 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 RCOR3Q9P2K3 495 aaPredicted RBP18.39■□□□□ 0.53
VCX3A-203ENST00000612369 SEPT3Q9UH03 358 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 PLXNB3Q9ULL4 1909 aa18.39■□□□□ 0.53
VCX3A-203ENST00000612369 H3BM21 787 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 BUB1BO60566 1050 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms