RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 TMC3Q7Z5M5 1100 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 PAF1Q8N7H5 531 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 OR52K1Q8NGK4 314 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 ANKRD7Q92527 254 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 LRIG1Q96JA1 1093 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 ZNF641Q96N77 438 aaPredicted RBP18.77■□□□□ 0.6
SSBP4-212ENST00000601919 TTC25Q96NG3 672 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 HEPHQ9BQS7 1158 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 NAT9Q9BTE0 207 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 ARNT2Q9HBZ2 717 aa18.77■□□□□ 0.6
SSBP4-212ENST00000601919 MUC22E2RYF6 1773 aaPredicted RBP18.77■□□□□ 0.6
SSBP4-212ENST00000601919 C19orf67A6NJJ6 358 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 WASH3PC4AMC7 463 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 USP12O75317 370 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 MAGEA4P43358 317 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 RPL26P61254 145 aaKnown RBP18.76■□□□□ 0.59
SSBP4-212ENST00000601919 SLC1A5Q15758 541 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 MLF2Q15773 248 aaPredicted RBP18.76■□□□□ 0.59
SSBP4-212ENST00000601919 FBXO43Q4G163 708 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 SPDYCQ5MJ68 293 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 BEND6Q5SZJ8 279 aaPredicted RBP18.76■□□□□ 0.59
SSBP4-212ENST00000601919 CFAP58Q5T655 872 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 ARMC12Q5T9G4 340 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 SDE2Q6IQ49 451 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 TXNDC11Q6PKC3 985 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 DPY19L3Q6ZPD9 716 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 ZNF534Q76KX8 674 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 TRMT10CQ7L0Y3 403 aaKnown RBP18.76■□□□□ 0.59
SSBP4-212ENST00000601919 CCNJLQ8IV13 435 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 ZBED8Q8IZ13 594 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 ZNF513Q8N8E2 541 aaPredicted RBP18.76■□□□□ 0.59
SSBP4-212ENST00000601919 OR2A12Q8NGT7 310 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 PYROXD1Q8WU10 500 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 FAM3CQ92520 227 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 APOL2Q9BQE5 337 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 TDRD1Q9BXT4 1180 aaKnown RBP18.76■□□□□ 0.59
SSBP4-212ENST00000601919 OSBPL1AQ9BXW6 950 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 IL22Q9GZX6 179 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 TMEM245Q9H330 911 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 SAMD15Q9P1V8 674 aa18.76■□□□□ 0.59
SSBP4-212ENST00000601919 RPL26L1Q9UNX3 145 aaKnown RBP18.76■□□□□ 0.59
SSBP4-212ENST00000601919 MAGEB16A2A368 324 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 K7EQS6 105 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 ALOX15BO15296 676 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 GJB3O75712 270 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 CPP00450 1065 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 ALADP13716 330 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 GRIA1P42261 906 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 PMS2P54278 862 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 SESN2P58004 480 aaPredicted RBP18.75■□□□□ 0.59
SSBP4-212ENST00000601919 PRKCQQ04759 706 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 LAMB3Q13751 1172 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 CCDC38Q502W7 563 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 EGFLAMQ63HQ2 1017 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 TPRG1Q6ZUI0 275 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 KDELC2Q7Z4H8 507 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 DSG4Q86SJ6 1040 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 SFTPA1Q8IWL2 248 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 CHPFQ8IZ52 775 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 NDUFAF2Q8N183 169 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 MREGQ8N565 214 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 SLC25A41Q8N5S1 370 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 OR6K2Q8NGY2 324 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 OR8D1Q8WZ84 308 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 PWWP2AQ96N64 755 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 ZDHHC6Q9H6R6 413 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 FBRSL1Q9HCM7 1045 aaKnown RBP18.75■□□□□ 0.59
SSBP4-212ENST00000601919 CHKBQ9Y259 395 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 MRPS17Q9Y2R5 130 aaKnown RBP18.75■□□□□ 0.59
SSBP4-212ENST00000601919 PCDHGC4Q9Y5F7 938 aa18.75■□□□□ 0.59
SSBP4-212ENST00000601919 HTRA2O43464 458 aaPredicted RBP18.74■□□□□ 0.59
SSBP4-212ENST00000601919 AVILO75366 819 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 PRNPP04156 253 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 TSHRP16473 764 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 NFKBIAP25963 317 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 EPHB1P54762 984 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 MRPS21P82921 87 aaKnown RBP18.74■□□□□ 0.59
SSBP4-212ENST00000601919 TRAF2Q12933 501 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 ELAVL3Q14576 367 aaKnown RBP18.74■□□□□ 0.59
SSBP4-212ENST00000601919 IHHQ14623 411 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 SIRPB2Q5JXA9 342 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 FSTL4Q6MZW2 842 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 CASC4Q6P4E1 433 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 ZNF852Q6ZMS4 543 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 CAMK1DQ8IU85 385 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 UBALD2Q8IYN6 164 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 PDCD6IPQ8WUM4 868 aaKnown RBP18.74■□□□□ 0.59
SSBP4-212ENST00000601919 PTPRN2Q92932 1015 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 RMDN1Q96DB5 314 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 SHDQ96IW2 340 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 TRIB3Q96RU7 358 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 SRPK1Q96SB4 655 aaKnown RBP18.74■□□□□ 0.59
SSBP4-212ENST00000601919 TXLNGYQ9BZA5 131 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 SUV39H2Q9H5I1 410 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 IL36AQ9UHA7 158 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 STON1Q9Y6Q2 735 aa18.74■□□□□ 0.59
SSBP4-212ENST00000601919 SYNCRIPO60506 623 aaKnown RBP18.73■□□□□ 0.59
SSBP4-212ENST00000601919 PGLSO95336 258 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 EGFP01133 1207 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 EPHX1P07099 455 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms