RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 LGMNQ99538 433 aa22.04■■□□□ 1.12
DDX39A-215ENST00000590696 TCEAL2Q9H3H9 227 aaPredicted RBP22.04■■□□□ 1.12
DDX39A-215ENST00000590696 NCKIPSDQ9NZQ3 722 aa22.04■■□□□ 1.12
DDX39A-215ENST00000590696 SPASTQ9UBP0 616 aa22.04■■□□□ 1.12
DDX39A-215ENST00000590696 ASXL3Q9C0F0 2248 aa22.04■■□□□ 1.12
DDX39A-215ENST00000590696 TPP1O14773 563 aa22.03■■□□□ 1.12
DDX39A-215ENST00000590696 ZNF143P52747 638 aaPredicted RBP22.03■■□□□ 1.12
DDX39A-215ENST00000590696 YBEYP58557 167 aaPredicted RBP22.03■■□□□ 1.12
DDX39A-215ENST00000590696 YPEL5P62699 121 aa22.03■■□□□ 1.12
DDX39A-215ENST00000590696 TLE3Q04726 772 aa22.03■■□□□ 1.12
DDX39A-215ENST00000590696 C1orf61Q13536 156 aa22.03■■□□□ 1.12
DDX39A-215ENST00000590696 DNAJC24Q6P3W2 148 aa22.03■■□□□ 1.12
DDX39A-215ENST00000590696 EFL1Q7Z2Z2 1120 aaKnown RBP22.03■■□□□ 1.12
DDX39A-215ENST00000590696 ZNF248Q8NDW4 579 aa22.03■■□□□ 1.12
DDX39A-215ENST00000590696 HMCESQ96FZ2 354 aa22.03■■□□□ 1.12
DDX39A-215ENST00000590696 NAF1Q96HR8 494 aaKnown RBP22.03■■□□□ 1.12
DDX39A-215ENST00000590696 POLR1BQ9H9Y6 1135 aa22.03■■□□□ 1.12
DDX39A-215ENST00000590696 MBNL1Q9NR56 388 aaKnown RBP22.03■■□□□ 1.12
DDX39A-215ENST00000590696 APOBEC3BQ9UH17 382 aaKnown RBP22.03■■□□□ 1.12
DDX39A-215ENST00000590696 LIMA1Q9UHB6 759 aaKnown RBP22.03■■□□□ 1.12
DDX39A-215ENST00000590696 PNMA8BQ9ULN7 279 aaPredicted RBP22.03■■□□□ 1.12
DDX39A-215ENST00000590696 FZD10Q9ULW2 581 aa22.03■■□□□ 1.12
DDX39A-215ENST00000590696 MFHAS1Q9Y4C4 1052 aa22.03■■□□□ 1.12
DDX39A-215ENST00000590696 TCRBV5S1A1TA0A578 114 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 EME2A4GXA9 379 aaPredicted RBP22.02■■□□□ 1.12
DDX39A-215ENST00000590696 RASA4BC9J798 803 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 RASA4O43374 803 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 GCATO75600 419 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 PRB1P04280 392 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 TIMP2P16035 220 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 LSSP48449 732 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 ADKP55263 362 aaKnown RBP22.02■■□□□ 1.12
DDX39A-215ENST00000590696 PCBP4P57723 403 aaKnown RBP22.02■■□□□ 1.12
DDX39A-215ENST00000590696 RPL7AP62424 266 aaKnown RBP22.02■■□□□ 1.12
DDX39A-215ENST00000590696 C1QBPQ07021 282 aaKnown RBP22.02■■□□□ 1.12
DDX39A-215ENST00000590696 SERINC3Q13530 473 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 NR0B2Q15466 257 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 ISXQ2M1V0 245 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 KLHL40Q2TBA0 621 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 PRRT3Q5FWE3 981 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 GPR155Q7Z3F1 870 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 PHACTR4Q8IZ21 702 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 TP53I13Q8NBR0 393 aaPredicted RBP22.02■■□□□ 1.12
DDX39A-215ENST00000590696 ANKRD20A12PQ8NF67 263 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 SLC39A7Q92504 469 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 MCEEQ96PE7 176 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 EPAS1Q99814 870 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 AGPAT1Q99943 283 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 WRAP53Q9BUR4 548 aaKnown RBP22.02■■□□□ 1.12
DDX39A-215ENST00000590696 C1QTNF7Q9BXJ2 289 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 CATSPERBQ9H7T0 1116 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 DKK3Q9UBP4 350 aa22.02■■□□□ 1.12
DDX39A-215ENST00000590696 ANKRD62A6NC57 917 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 LGALS16A8MUM7 142 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 WASH4PA8MWX3 477 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 RIOK3O14730 519 aaKnown RBP22.01■■□□□ 1.11
DDX39A-215ENST00000590696 ATXN7O15265 892 aaPredicted RBP22.01■■□□□ 1.11
DDX39A-215ENST00000590696 INSIG1O15503 277 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 DXOO77932 396 aaKnown RBP22.01■■□□□ 1.11
DDX39A-215ENST00000590696 EIF4A3P38919 411 aaKnown RBP22.01■■□□□ 1.11
DDX39A-215ENST00000590696 CXADRP78310 365 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 UBXN1Q04323 297 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 CYTH1Q15438 398 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 PARP15Q460N3 678 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 FAXCQ5TGI0 409 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 CRTC1Q6UUV9 634 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 CLEC17AQ6ZS10 378 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 RBM43Q6ZSC3 357 aaKnown RBP22.01■■□□□ 1.11
DDX39A-215ENST00000590696 HIC2Q96JB3 615 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 EXOC2Q96KP1 924 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 BOCQ9BWV1 1114 aa22.01■■□□□ 1.11
DDX39A-215ENST00000590696 CPEB1Q9BZB8 566 aaKnown RBP22.01■■□□□ 1.11
DDX39A-215ENST00000590696 TK2O00142 265 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 LZTS3O60299 673 aaPredicted RBP22■■□□□ 1.11
DDX39A-215ENST00000590696 PIGNO95427 931 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 XPAP23025 273 aaPredicted RBP22■■□□□ 1.11
DDX39A-215ENST00000590696 AIF1P55008 147 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 TMEM52BQ4KMG9 183 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 PERM1Q5SV97 790 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 PPP1R15BQ5SWA1 713 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 MACC1Q6ZN28 852 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 UMODL1-AS1Q8N2C9 162 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 GLMNQ92990 594 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 NCAPGQ9BPX3 1015 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 CNPY3Q9BT09 278 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 LRRC61Q9BV99 259 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 SLC13A1Q9BZW2 595 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 LHX3Q9UBR4 397 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 COQ6Q9Y2Z9 468 aa22■■□□□ 1.11
DDX39A-215ENST00000590696 TEX51A0A1B0GUA7 166 aa21.99■■□□□ 1.11
DDX39A-215ENST00000590696 TOR1BO14657 336 aa21.99■■□□□ 1.11
DDX39A-215ENST00000590696 MUSKO15146 869 aa21.99■■□□□ 1.11
DDX39A-215ENST00000590696 ANXA6P08133 673 aa21.99■■□□□ 1.11
DDX39A-215ENST00000590696 CDK11BP21127 795 aaKnown RBP21.99■■□□□ 1.11
DDX39A-215ENST00000590696 RPIAP49247 311 aa21.99■■□□□ 1.11
DDX39A-215ENST00000590696 ERVPABLB-1P60509 514 aa21.99■■□□□ 1.11
DDX39A-215ENST00000590696 MYL5Q02045 173 aa21.99■■□□□ 1.11
DDX39A-215ENST00000590696 PPARDQ03181 441 aa21.99■■□□□ 1.11
DDX39A-215ENST00000590696 IRF4Q15306 451 aa21.99■■□□□ 1.11
DDX39A-215ENST00000590696 C6orf132Q5T0Z8 1188 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms