RNA–Protein interactions for RNA: ENST00000570513.5

CALCOCO2-225, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-225	ENST00000570513	TMEM245	Q9H330	911 aa		11.64	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	OCEL1	Q9H607	264 aa		11.64	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	XAB2	Q9HCS7	855 aa	Known RBP	11.64	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	RAI2	Q9Y5P3	530 aa		11.64	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	EDDM13	A0A1B0GTR0	161 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	CCDC151	A5D8V7	595 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	SIN3B	O75182	1162 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	AVIL	O75366	819 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	ATXN1L	P0C7T5	689 aa	Known RBP	11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	DRD1	P21728	446 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	CD72	P21854	359 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	CES1	P23141	567 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	MAGEA3	P43357	314 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	SESN2	P58004	480 aa	Predicted RBP	11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	CDK18	Q07002	472 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	GALNT3	Q14435	633 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	MYLK3	Q32MK0	819 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	BBS9	Q3SYG4	887 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	MSS51	Q4VC12	460 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	FNBP1L	Q5T0N5	605 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	FBXO38	Q6PIJ6	1188 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	CHPF	Q8IZ52	775 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	SLC25A41	Q8N5S1	370 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	LPCAT1	Q8NF37	534 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	VOPP1	Q96AW1	172 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	ERLEC1	Q96DZ1	483 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	IFT43	Q96FT9	208 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	TUBGCP5	Q96RT8	1024 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	TRIB3	Q96RU7	358 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	WDR83	Q9BRX9	315 aa	Known RBP	11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	FOXP3	Q9BZS1	431 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	ATP13A3	Q9H7F0	1226 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	CASS4	Q9NQ75	786 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	FBXL21	Q9UKT6	434 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	NDRG2	Q9UN36	371 aa	Known RBP	11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	CHKB	Q9Y259	395 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	STARD13	Q9Y3M8	1113 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	PCDHGC4	Q9Y5F7	938 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	STON1	Q9Y6Q2	735 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	WASF2	Q9Y6W5	498 aa		11.63	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	WASH3P	C4AMC7	463 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	RNF40	O75150	1001 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	SOCS5	O75159	536 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	PPFIA2	O75334	1257 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	ERLIN1	O75477	346 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	KLF8	O95600	359 aa	Predicted RBP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	NDST3	O95803	873 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	UGT2B4	P06133	528 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	EPHX1	P07099	455 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	CTSL	P07711	333 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	MLN	P12872	115 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	H2AFX	P16104	143 aa	Predicted RBP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	CA4	P22748	312 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	MGAT1	P26572	445 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	SERPINA4	P29622	427 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	TNNT3	P45378	269 aa	Predicted RBP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	SARNP	P82979	210 aa	Known RBP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	PRKCQ	Q04759	706 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	BCL2L1	Q07817	233 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	PDIA2	Q13087	525 aa	Known RBP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	ENPP2	Q13822	863 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	ELAVL3	Q14576	367 aa	Known RBP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	FASTKD3	Q14CZ7	662 aa	Known RBP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	MAP9	Q49MG5	647 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	C2orf27A	Q580R0	203 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	DNAJC21	Q5F1R6	531 aa	Known RBP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	SIRPB2	Q5JXA9	342 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	DENND5A	Q6IQ26	1287 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	LRRC8B	Q6P9F7	803 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	EMB	Q6PCB8	327 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	CENPU	Q71F23	418 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	TMC3	Q7Z5M5	1100 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	LINC00523	Q86TU6	105 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	CAMK1D	Q8IU85	385 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	PLPP6	Q8IY26	295 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	PDIK1L	Q8N165	341 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	STK40	Q8N2I9	435 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	AGGF1	Q8N302	714 aa	eCLIP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	PAF1	Q8N7H5	531 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	DNAAF3	Q8N9W5	541 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	PTPRN2	Q92932	1015 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	NECAB3	Q96P71	396 aa	Predicted RBP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	HEPH	Q9BQS7	1158 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	PHACTR1	Q9C0D0	580 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	SAYSD1	Q9NPB0	183 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	SYBU	Q9NX95	663 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	IL36A	Q9UHA7	158 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	MUTYH	Q9UIF7	546 aa		11.62	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	UNC80	Q8N2C7	3258 aa		11.61	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	LOC285095	A0A1B0GVY8	99 aa		11.61	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	KRBA1	A5PL33	1030 aa		11.61	□□□□□ -0.55
CALCOCO2-225	ENST00000570513		E7ESA3	106 aa		11.61	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	MAN2B1	O00754	1011 aa		11.61	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	TRAFD1	O14545	582 aa	Predicted RBP	11.61	□□□□□ -0.55
CALCOCO2-225	ENST00000570513	NPC1	O15118	1278 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms