RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 SNRPD1P62314 119 aaKnown RBP11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 OGDHQ02218 1023 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 SYCP1Q15431 976 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 CLEC16AQ2KHT3 1053 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 KLHL40Q2TBA0 621 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 HS1BP3Q53T59 392 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 C3orf38Q5JPI3 329 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 ZCCHC8Q6NZY4 707 aaKnown RBP11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 GDPD4Q6W3E5 623 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 STRADAQ7RTN6 431 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 ZSWIM9Q86XI8 627 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 ZNF677Q86XU0 584 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 TP53I13Q8NBR0 393 aaPredicted RBP11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 MSANTD4Q8NCY6 345 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 ENOX1Q8TC92 643 aaKnown RBP11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 NSMCE3Q96MG7 304 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 DEPDC7Q96QD5 511 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 LGMNQ99538 433 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 LRRC61Q9BV99 259 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 BOCQ9BWV1 1114 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 TTYH3Q9C0H2 523 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 ABCG4Q9H172 646 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 POLR1BQ9H9Y6 1135 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 GPATCH2LQ9NWQ4 482 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 ADAM22Q9P0K1 906 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 LHX3Q9UBR4 397 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 RABGEF1Q9UJ41 708 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 CSNK1G3Q9Y6M4 447 aa11.7□□□□□ -0.54
PRPF40B-212ENST00000551111 EME2A4GXA9 379 aaPredicted RBP11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 SIGLEC16A6NMB1 481 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 RASA4BC9J798 803 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 J3KR12 359 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 YY2O15391 372 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 RASA4O43374 803 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 BUB1BO60566 1050 aaPredicted RBP11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 DXOO77932 396 aaKnown RBP11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 PRKCGP05129 697 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 GP1BAP07359 652 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 KRT10P13645 584 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 TSHRP16473 764 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 GPD1P21695 349 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 EPHB2P29323 1055 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 EIF4A3P38919 411 aaKnown RBP11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 RGRP47804 291 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 IRF4Q15306 451 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 ARL13BQ3SXY8 428 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 ARHGAP40Q5TG30 622 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 SCYL2Q6P3W7 929 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 MON1BQ7L1V2 547 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 GPR155Q7Z3F1 870 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 SLFN11Q7Z7L1 901 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 ZNF354CQ86Y25 554 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 SFTPA2Q8IWL1 248 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 PHACTR4Q8IZ21 702 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 ZNF843Q8N446 348 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 RTL3Q8N8U3 475 aaKnown RBP11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 FAM174AQ8TBP5 190 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 ASB12Q8WXK4 309 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 TSACCQ96A04 125 aaPredicted RBP11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 NTAN1Q96AB6 310 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 RAB7BQ96AH8 199 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 VCPIP1Q96JH7 1222 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 IL12RB2Q99665 862 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 EPAS1Q99814 870 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 DUSP23Q9BVJ7 150 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 SEMA4CQ9C0C4 833 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 TAS2R14Q9NYV8 317 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 APOBEC3BQ9UH17 382 aaKnown RBP11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 DACH1Q9UI36 760 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 SALL4Q9UJQ4 1053 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 HPCAL4Q9UM19 191 aa11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 FLNBO75369 2602 aaKnown RBP11.69□□□□□ -0.54
PRPF40B-212ENST00000551111 H3BM21 787 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 CREB3O43889 395 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 LZTS3O60299 673 aaPredicted RBP11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 TM7SF2O76062 418 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 ETFBP38117 255 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 STAT1P42224 750 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 DUSP3P51452 185 aaPredicted RBP11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 COPB1P53618 953 aaKnown RBP11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 GSCP56915 257 aaPredicted RBP11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 RHOAP61586 193 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 SERINC3Q13530 473 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 CA9Q16790 459 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 WSCD2Q2TBF2 565 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 PPP1R15BQ5SWA1 713 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 FAXCQ5TGI0 409 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 FOXR1Q6PIV2 292 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 APTXQ7Z2E3 356 aaKnown RBP11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 B3GNT8Q7Z7M8 397 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 PHF13Q86YI8 300 aaPredicted RBP11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 TP53INP2Q8IXH6 220 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 C3orf20Q8ND61 904 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 ZNF248Q8NDW4 579 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 DENND6BQ8NEG7 585 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 CELF6Q96J87 481 aaKnown RBP11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 GDAP1L1Q96MZ0 367 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 ZNF578Q96N58 590 aaPredicted RBP11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 MCEEQ96PE7 176 aa11.68□□□□□ -0.54
PRPF40B-212ENST00000551111 SELENOOQ9BVL4 669 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms