RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 CALB1P05937 261 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 CDK11BP21127 795 aaKnown RBP12.04□□□□□ -0.48
GABPB1-206ENST00000543881 AKT2P31751 481 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 ABL2P42684 1182 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 NFATC3Q12968 1075 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 ABI3BPQ7Z7G0 1075 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 SLFN11Q7Z7L1 901 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 PLPP6Q8IY26 295 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 AOPEPQ8N6M6 819 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 ANKRD20A12PQ8NF67 263 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 IFT43Q96FT9 208 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 PRR11Q96HE9 360 aaPredicted RBP12.04□□□□□ -0.48
GABPB1-206ENST00000543881 BMFQ96LC9 184 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 SYT11Q9BT88 431 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 FAM117AQ9C073 453 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 KLC2Q9H0B6 622 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 MAGEH1Q9H213 219 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 RETREG1Q9H6L5 497 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 ZDHHC6Q9H6R6 413 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 SEPT11Q9NVA2 429 aaKnown RBP12.04□□□□□ -0.48
GABPB1-206ENST00000543881 DNAJC28Q9NX36 388 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 TAS2R14Q9NYV8 317 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 IL17BQ9UHF5 180 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 GGT7Q9UJ14 662 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 PCDHGA8Q9Y5G5 932 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 HEMK1Q9Y5R4 338 aaPredicted RBP12.04□□□□□ -0.48
GABPB1-206ENST00000543881 TRPM6Q9BX84 2022 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 CXorf51AA0A1B0GTR3 108 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 POM121BA6NF01 834 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 CDRT15L2A8MXV6 281 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 SPINT1O43278 529 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 KDELR3O43731 214 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 RAMP2O60895 175 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 PAK4O96013 591 aaPredicted RBP12.03□□□□□ -0.48
GABPB1-206ENST00000543881 ETFBP38117 255 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 ZNF143P52747 638 aaPredicted RBP12.03□□□□□ -0.48
GABPB1-206ENST00000543881 HNRNPKP61978 463 aaKnown RBP eCLIP12.03□□□□□ -0.48
GABPB1-206ENST00000543881 OGDHQ02218 1023 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 TYRO3Q06418 890 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 POLD3Q15054 466 aaPredicted RBP12.03□□□□□ -0.48
GABPB1-206ENST00000543881 CDKN3Q16667 212 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 KIF26BQ2KJY2 2108 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 ZSCAN23Q3MJ62 389 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 CCDC183Q5T5S1 534 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 ATXN7L2Q5T6C5 722 aaPredicted RBP12.03□□□□□ -0.48
GABPB1-206ENST00000543881 ZCCHC8Q6NZY4 707 aaKnown RBP12.03□□□□□ -0.48
GABPB1-206ENST00000543881 DNAJC24Q6P3W2 148 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 SCYL2Q6P3W7 929 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 FOXR1Q6PIV2 292 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 Q6ZSR6 202 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 IRF2BP2Q7Z5L9 587 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 NETO2Q8NC67 525 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 GRAMD1AQ96CP6 724 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 MCEEQ96PE7 176 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 SLC17A9Q9BYT1 436 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 TRIM4Q9C037 500 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 GPR27Q9NS67 375 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 TMEM63CQ9P1W3 806 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 FZD10Q9ULW2 581 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 ITM2BQ9Y287 266 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 ENTPD2Q9Y5L3 495 aa12.03□□□□□ -0.48
GABPB1-206ENST00000543881 CPED1A4D0V7 1026 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 PMS2P1A4D2B8 440 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 C16orf96A6NNT2 1141 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 A6NNZ2 444 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 KRIT1O00522 736 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 AP1G1O43747 822 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 GSRP00390 522 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 EPHB2P29323 1055 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 RPS21P63220 83 aaKnown RBP12.02□□□□□ -0.48
GABPB1-206ENST00000543881 SRSF1Q07955 248 aaKnown RBP eCLIP12.02□□□□□ -0.48
GABPB1-206ENST00000543881 CLN3Q13286 438 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 MYLK3Q32MK0 819 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 ZNF805Q5CZA5 627 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 ACAD10Q6JQN1 1059 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 KIAA1161Q6NSJ0 714 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 GUSBP11Q6P575 273 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 RBM44Q6ZP01 1051 aaKnown RBP12.02□□□□□ -0.48
GABPB1-206ENST00000543881 PTAR1Q7Z6K3 402 aaPredicted RBP12.02□□□□□ -0.48
GABPB1-206ENST00000543881 DNAAF5Q86Y56 855 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 MCOLN2Q8IZK6 566 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 RYBPQ8N488 228 aaPredicted RBP12.02□□□□□ -0.48
GABPB1-206ENST00000543881 ARL14Q8N4G2 192 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 RTL3Q8N8U3 475 aaKnown RBP12.02□□□□□ -0.48
GABPB1-206ENST00000543881 EXD3Q8N9H8 876 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 ZNF548Q8NEK5 533 aaPredicted RBP12.02□□□□□ -0.48
GABPB1-206ENST00000543881 OR2AP1Q8NGE2 309 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 FEM1CQ96JP0 617 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 KLF6Q99612 283 aaPredicted RBP12.02□□□□□ -0.48
GABPB1-206ENST00000543881 C1QTNF2Q9BXJ5 285 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 HS3ST3A1Q9Y663 406 aa12.02□□□□□ -0.48
GABPB1-206ENST00000543881 IGLON5A6NGN9 336 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 BUB1O43683 1085 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 CREB3O43889 395 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 TMCC1O94876 653 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 CSF2P04141 144 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 UGT2B4P06133 528 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 FERP16591 822 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 GEMIN4P57678 1058 aaKnown RBP12.02□□□□□ -0.49
GABPB1-206ENST00000543881 ANO6Q4KMQ2 910 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms