RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 KCTD3Q9Y597 815 aa17.01■□□□□ 0.31
SREK1-212ENST00000522912 SLC4A7Q9Y6M7 1214 aa17.01■□□□□ 0.31
SREK1-212ENST00000522912 CCDC195A0A1B0GUA6 201 aa17■□□□□ 0.31
SREK1-212ENST00000522912 H0Y626 953 aa17■□□□□ 0.31
SREK1-212ENST00000522912 PAPSS2O95340 614 aaPredicted RBP17■□□□□ 0.31
SREK1-212ENST00000522912 EPOP01588 193 aa17■□□□□ 0.31
SREK1-212ENST00000522912 PROCP04070 461 aa17■□□□□ 0.31
SREK1-212ENST00000522912 MPOP05164 745 aa17■□□□□ 0.31
SREK1-212ENST00000522912 CKMP06732 381 aa17■□□□□ 0.31
SREK1-212ENST00000522912 HSPA1AP0DMV8 641 aaKnown RBP17■□□□□ 0.31
SREK1-212ENST00000522912 HSPA1BP0DMV9 641 aaKnown RBP17■□□□□ 0.31
SREK1-212ENST00000522912 CR2P20023 1033 aa17■□□□□ 0.31
SREK1-212ENST00000522912 SLC1A2P43004 574 aa17■□□□□ 0.31
SREK1-212ENST00000522912 THOC5Q13769 683 aaKnown RBP17■□□□□ 0.31
SREK1-212ENST00000522912 GALNT3Q14435 633 aa17■□□□□ 0.31
SREK1-212ENST00000522912 CHI3L2Q15782 390 aa17■□□□□ 0.31
SREK1-212ENST00000522912 PSRC1Q6PGN9 363 aaPredicted RBP17■□□□□ 0.31
SREK1-212ENST00000522912 CLEC14AQ86T13 490 aa17■□□□□ 0.31
SREK1-212ENST00000522912 RNF135Q8IUD6 432 aa17■□□□□ 0.31
SREK1-212ENST00000522912 MRPL43Q8N983 215 aaKnown RBP17■□□□□ 0.31
SREK1-212ENST00000522912 C2CD4AQ8NCU7 369 aaPredicted RBP17■□□□□ 0.31
SREK1-212ENST00000522912 HERVK_113Q902F9 699 aa17■□□□□ 0.31
SREK1-212ENST00000522912 E2F7Q96AV8 911 aa17■□□□□ 0.31
SREK1-212ENST00000522912 CORO1BQ9BR76 489 aa17■□□□□ 0.31
SREK1-212ENST00000522912 EMILIN2Q9BXX0 1053 aa17■□□□□ 0.31
SREK1-212ENST00000522912 NPHS2Q9NP85 383 aa17■□□□□ 0.31
SREK1-212ENST00000522912 SLC39A10Q9ULF5 831 aa17■□□□□ 0.31
SREK1-212ENST00000522912 LZTS1Q9Y250 596 aa17■□□□□ 0.31
SREK1-212ENST00000522912 HELZP42694 1942 aaKnown RBP16.99■□□□□ 0.31
SREK1-212ENST00000522912 A0A096LPK6 155 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 LDB2O43679 373 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 ZMPSTE24O75844 475 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 LUC7L3O95232 432 aaKnown RBP16.99■□□□□ 0.31
SREK1-212ENST00000522912 GLUD1P00367 558 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 IL1BP01584 269 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 FGF1P05230 155 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 C2P06681 752 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 MYL4P12829 197 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 HLA-DPA1P20036 260 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 LIG3P49916 1009 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 SCNN1BP51168 640 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 PGGT1BP53609 377 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 IRF9Q00978 393 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 BST1Q10588 318 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 ZNF470Q6ECI4 717 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 NEPROQ6NW34 567 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 LINGO4Q6UY18 593 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 ZNF783Q6ZMS7 281 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 SPRED2Q7Z698 418 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 MFSD6LQ8IWD5 586 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 TRIM42Q8IWZ5 723 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 C7orf61Q8IZ16 206 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 ELMOD1Q8N336 334 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 SPPL3Q8TCT6 385 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 BHMTQ93088 406 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 HCFC1R1Q9NWW0 138 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 CFAP97Q9P2B7 532 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 FBXO5Q9UKT4 447 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 OR51B4Q9Y5P0 310 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 INSIG1O15503 277 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 ALDH3A1P30838 453 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 CCR2P41597 374 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 ARSDP51689 593 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 TMPRSS15P98073 1019 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 SLC14A2Q15849 920 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 UGP2Q16851 508 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 FASTKD1Q53R41 847 aaKnown RBP16.99■□□□□ 0.31
SREK1-212ENST00000522912 FYB2Q5VWT5 728 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 HTR3DQ70Z44 454 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 FITM2Q8N6M3 262 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 RFWD2Q8NHY2 731 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 POF1BQ8WVV4 589 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 ALG14Q96F25 216 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 FEM1AQ9BSK4 669 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 FAM167BQ9BTA0 163 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 SLC46A2Q9BY10 475 aa16.99■□□□□ 0.31
SREK1-212ENST00000522912 ZNF395Q9H8N7 513 aaPredicted RBP16.99■□□□□ 0.31
SREK1-212ENST00000522912 LSM7Q9UK45 103 aaKnown RBP16.99■□□□□ 0.31
SREK1-212ENST00000522912 MYO7AQ13402 2215 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 TRAV19A0A0A6YYK7 116 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 CCL22O00626 93 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 AURKAO14965 403 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 UBOX5O94941 541 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 NDST3O95803 873 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 SYN1P17600 705 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 CDC25CP30307 473 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 HADHAP40939 763 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 CLCN4P51793 760 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 PCLAFQ15004 111 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 SLC41A1Q8IVJ1 513 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 BBS7Q8IWZ6 715 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 HAUS2Q9NVX0 235 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 CHKBQ9Y259 395 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 USH1CQ9Y6N9 552 aa16.98■□□□□ 0.31
SREK1-212ENST00000522912 HGSO14964 777 aaPredicted RBP16.97■□□□□ 0.31
SREK1-212ENST00000522912 TMCC1O94876 653 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 HAUS5O94927 633 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 GSTA1P08263 222 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 PIRTP0C851 137 aa16.97■□□□□ 0.31
SREK1-212ENST00000522912 TROVE2P10155 538 aaKnown RBP eCLIP16.97■□□□□ 0.313e-14■■□□□ 13.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms