RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CTNNAL1Q9UBT7 734 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 MALT1Q9UDY8 824 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 ZNF112Q9UJU3 913 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 SLC45A1Q9Y2W3 748 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 DOCK7Q96N67 2140 aa3.53□□□□□ -1.84
HMGB1P29-201ENST00000505659 HSPB2A8KAH6 182 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 NPIPB11E5RHQ5 1161 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 RGS11O94810 467 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZNF432O94892 652 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 VNN2O95498 520 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 SRD5A1P18405 259 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 LIFRP42702 1097 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 ARL4CP56559 192 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 TRAF2Q12933 501 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 NAA25Q14CX7 972 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 SF3B4Q15427 424 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 HSPB2Q16082 182 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 PLEKHO1Q53GL0 409 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 XKR9Q5GH70 373 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZNF667Q5HYK9 610 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 RHBDF2Q6PJF5 856 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 IL20RBQ6UXL0 311 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 LDHAL6AQ6ZMR3 332 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 PRSS45Q7RTY3 260 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 AADATQ8N5Z0 425 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZNF114Q8NC26 417 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 SPATA20Q8TB22 786 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 TMEM170AQ8WVE7 144 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 DNASE2BQ8WZ79 361 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 TRIB2Q92519 343 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 ERGIC1Q969X5 290 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 ADGRG7Q96K78 797 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 REEP2Q9BRK0 252 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 PYM1Q9BRP8 204 aaKnown RBP3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 PHF7Q9BWX1 381 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 NOD2Q9HC29 1040 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 ICAM5Q9UMF0 924 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 GPR52Q9Y2T5 361 aa3.52□□□□□ -1.85
HMGB1P29-201ENST00000505659 SCN5AQ14524 2016 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 A0A0U1RQJ8 604 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 EBAG9O00559 213 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 CAMTA2O94983 1202 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 MYF6P23409 242 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 RYKP34925 604 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 HALP42357 657 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 PAPOLAP51003 745 aaKnown RBP3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 CLDN2P57739 230 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 HYAL1Q12794 435 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 ANKRD1Q15327 319 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 KIF19Q2TAC6 998 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 EDRF1Q3B7T1 1238 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZNF718Q3SXZ3 478 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 ESCO2Q56NI9 601 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZNF628Q5EBL2 1059 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 EFHC1Q5JVL4 640 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 FBXO47Q5MNV8 452 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 FAM69BQ5VUD6 431 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 LRRC8EQ6NSJ5 796 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 CCDC129Q6ZRS4 1044 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZNF329Q86UD4 541 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 CPXM2Q8N436 756 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 SPATA5Q8NB90 893 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 LSM14AQ8ND56 463 aaKnown RBP3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 SPATA3Q8NHX4 192 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 RUFY2Q8WXA3 655 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 SCMH1Q96GD3 660 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 EYA3Q99504 573 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 PKP4Q99569 1192 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 NUF2Q9BZD4 464 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 PPCSQ9HAB8 311 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 NOX4Q9NPH5 578 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 CYSLTR2Q9NS75 346 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 ANKRD10Q9NXR5 420 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 NDRG3Q9UGV2 375 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 SUFUQ9UMX1 484 aa3.51□□□□□ -1.85
HMGB1P29-201ENST00000505659 IGLV5-37A0A075B6J1 123 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 LOC102724159A0A0B4J2E5 919 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 C17orf113A0A1B0GUU1 675 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 hDV102S1A0JD36 115 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 TYW5A2RUC4 315 aaKnown RBP3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 DENND3A2RUS2 1198 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 KLRF2D3W0D1 207 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 IFNL4K9M1U5 179 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 SLC16A5O15375 505 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 SNRNP70P08621 437 aaKnown RBP3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 FMO4P31512 558 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 BRWD1-AS2P59051 145 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 ST3GAL1Q11201 340 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 DLG1Q12959 904 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 SNTA1Q13424 505 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 RUNX2Q13950 521 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 PWP2Q15269 919 aaKnown RBP3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 SOWAHAQ2M3V2 549 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 CPOQ8IVL8 374 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 SFTPA2Q8IWL1 248 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 PARP16Q8N5Y8 322 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 ZMIZ2Q8NF64 920 aa3.5□□□□□ -1.85
HMGB1P29-201ENST00000505659 GJC3Q8NFK1 279 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms