RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.73□□□□□ -1.65
VPS13A-211ENST00000484581 ASAH2Q9NR71 780 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 SLC6A13Q9NSD5 602 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.73□□□□□ -1.65
VPS13A-211ENST00000484581 ARGLU1Q9NWB6 273 aaPredicted RBP4.73□□□□□ -1.65
VPS13A-211ENST00000484581 NLKQ9UBE8 527 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 FBXL17Q9UF56 701 aa4.73□□□□□ -1.65
VPS13A-211ENST00000484581 MAST3O60307 1309 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.72□□□□□ -1.65
VPS13A-211ENST00000484581 TCRBV7S3A2A0A539 114 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 FAM90A8PA6NJQ4 464 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 BTBD19C9JJ37 291 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 H7C1Q1 480 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 SNAP23O00161 211 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 CTDSP2O14595 271 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 USP12O75317 370 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 TBX10O75333 385 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 NDUFS3O75489 264 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 DDAH2O95865 285 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 ELFN1P0C7U0 828 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 FAM90A13PP0C7W8 464 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 FAM90A24PP0C7X0 464 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 SELLP14151 372 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 AKR1A1P14550 325 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 SLC2A4P14672 509 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 DRD4P21917 467 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 IDUAP35475 653 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 PIP4K2AP48426 406 aaPredicted RBP4.72□□□□□ -1.65
VPS13A-211ENST00000484581 GNAQP50148 359 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 ARSFP54793 590 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 F2RL1P55085 397 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 HDAC4P56524 1084 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 CYP4F2P78329 520 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 OLIG2Q13516 323 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 KPNB1Q14974 876 aaKnown RBP4.72□□□□□ -1.65
VPS13A-211ENST00000484581 HIST2H2ACQ16777 129 aaPredicted RBP4.72□□□□□ -1.65
VPS13A-211ENST00000484581 ALG11Q2TAA5 492 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 PLK5Q496M5 336 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 C10orf76Q5T2E6 689 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 ADALQ6DHV7 355 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 IL27RAQ6UWB1 636 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 DHRS13Q6UX07 377 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 DENND5BQ6ZUT9 1274 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 SLFN11Q7Z7L1 901 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 IL17RCQ8NAC3 791 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 POGLUT1Q8NBL1 392 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 GDPD5Q8WTR4 605 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 ZNF653Q96CK0 615 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 DAZAP1Q96EP5 407 aaKnown RBP4.72□□□□□ -1.65
VPS13A-211ENST00000484581 SAT2Q96F10 170 aaPredicted RBP4.72□□□□□ -1.65
VPS13A-211ENST00000484581 PGAP3Q96FM1 320 aaPredicted RBP4.72□□□□□ -1.65
VPS13A-211ENST00000484581 VMP1Q96GC9 406 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 ABHD1Q96SE0 405 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 LTB4R2Q9NPC1 389 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 ARL8BQ9NVJ2 186 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 CCL27Q9Y4X3 112 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 PCDHGB5Q9Y5G0 923 aa4.72□□□□□ -1.65
VPS13A-211ENST00000484581 SOS1Q07889 1333 aaPredicted RBP4.72□□□□□ -1.65
VPS13A-211ENST00000484581 OR2A25A4D2G3 310 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 INO80B-WBP1J3KQ70 363 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 EXOC3O60645 756 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 IGLV2-14P01704 120 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 HSP90AB1P08238 724 aaKnown RBP4.71□□□□□ -1.66
VPS13A-211ENST00000484581 KRT10P13645 584 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 PTPN2P17706 415 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 MUTP22033 750 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 PTGER1P34995 402 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 SOX2P48431 317 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 ZNF41P51814 821 aaPredicted RBP4.71□□□□□ -1.66
VPS13A-211ENST00000484581 PMS2P54278 862 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 MFAP4P55083 255 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 RRP1P56182 461 aaKnown RBP4.71□□□□□ -1.66
VPS13A-211ENST00000484581 KRTAP10-9P60411 292 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 MRPS35P82673 323 aaKnown RBP4.71□□□□□ -1.66
VPS13A-211ENST00000484581 PLIN5Q00G26 463 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 SLC14A1Q13336 389 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 FGFBP1Q14512 234 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 VEPH1Q14D04 833 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 CDC37Q16543 378 aaPredicted RBP4.71□□□□□ -1.66
VPS13A-211ENST00000484581 ME3Q16798 604 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 C15orf59Q2T9L4 293 aaPredicted RBP4.71□□□□□ -1.66
VPS13A-211ENST00000484581 EPHA10Q5JZY3 1008 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 TMEM268Q5VZI3 342 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 KIAA0930Q6ICG6 404 aaPredicted RBP4.71□□□□□ -1.66
VPS13A-211ENST00000484581 NAPRTQ6XQN6 538 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 SLC29A4Q7RTT9 530 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 GLCCI1Q86VQ1 547 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 SYT2Q8N9I0 419 aaPredicted RBP4.71□□□□□ -1.66
VPS13A-211ENST00000484581 TDRD5Q8NAT2 981 aaKnown RBP4.71□□□□□ -1.66
VPS13A-211ENST00000484581 FAM98AQ8NCA5 519 aaKnown RBP4.71□□□□□ -1.66
VPS13A-211ENST00000484581 ACTRT2Q8TDY3 377 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 FAR1Q8WVX9 515 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 SGCDQ92629 289 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 ARHGEF26Q96DR7 871 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 GCNAQ96QF7 691 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 KLHL4Q9C0H6 718 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 PLEKHA4Q9H4M7 779 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 CXorf56Q9H5V9 222 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 PLK2Q9NYY3 685 aa4.71□□□□□ -1.66
VPS13A-211ENST00000484581 OGFRQ9NZT2 677 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms