RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 SKIV2L2P42285 1042 aaKnown RBP4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 GABRB2P47870 512 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 PPP2R5BQ15173 497 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 C5orf22Q49AR2 442 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 GLE1Q53GS7 698 aaKnown RBP4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 SOWAHCQ53LP3 525 aaPredicted RBP4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 SGO1Q5FBB7 561 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 FAM171A1Q5VUB5 890 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 LRRC8EQ6NSJ5 796 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 SUSD1Q6UWL2 747 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 FAR1Q8WVX9 515 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 HAS1Q92839 578 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 ARHGEF26Q96DR7 871 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 SPATA17Q96L03 361 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 FER1L6-AS2Q96M78 137 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 TOX2Q96NM4 488 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 KRTAP3-1Q9BYR8 98 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 FAM129AQ9BZQ8 928 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 HIPK3Q9H422 1215 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 ZCCHC4Q9H5U6 513 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 ZWILCHQ9H900 591 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 PARD6AQ9NPB6 346 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 ARGLU1Q9NWB6 273 aaPredicted RBP4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 PAG1Q9NWQ8 432 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 FBXO40Q9UH90 709 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 ANAPC2Q9UJX6 822 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 ADAM21Q9UKJ8 722 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 AOX1Q06278 1338 aa4.36□□□□□ -1.71
HMGN3P1-201ENST00000453847 LOC102723996A0A087X1L8 192 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 A0A1B0GVM2 712 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 TMEM247A6NEH6 219 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 KLRF2D3W0D1 207 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 H0Y626 953 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 CHL1O00533 1208 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 SPRY1O43609 319 aaPredicted RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 KLK8O60259 260 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 TBCAO75347 108 aaKnown RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 NEURL1O76050 574 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 PEX11BO96011 259 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 WNT1P04628 370 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 ST6GAL1P15907 406 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 CPT2P23786 658 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 PON1P27169 355 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 EEF1DP29692 281 aaKnown RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 HOXA7P31268 230 aaPredicted RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 CAPZA2P47755 286 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 CENPAP49450 140 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 CYP2J2P51589 502 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 STAT2P52630 851 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 PNLIPRP2P54317 469 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 YWHAZP63104 245 aaKnown RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 MRPS5P82675 430 aaKnown RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 HOXA4Q00056 320 aaPredicted RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 PPP2R5CQ13362 524 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 COG2Q14746 738 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 VEPH1Q14D04 833 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 PGM5Q15124 567 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 HIST2H2ACQ16777 129 aaPredicted RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 CRY2Q49AN0 593 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 CDONQ4KMG0 1287 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 ZNF805Q5CZA5 627 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 C9orf152Q5JTZ5 239 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 LRIF1Q5T3J3 769 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 TMEM268Q5VZI3 342 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 TMEM198Q66K66 360 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 TRAT1Q6PIZ9 186 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 FBXO46Q6PJ61 603 aaPredicted RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 CPLX2Q6PUV4 134 aaKnown RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 TRIM72Q6ZMU5 477 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 RBM44Q6ZP01 1051 aaKnown RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 QSOX2Q6ZRP7 698 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 WDR5BQ86VZ2 330 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 RASAL3Q86YV0 1011 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 CARNMT1Q8N4J0 409 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 CHST13Q8NET6 341 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 OR6J1Q8NGC5 347 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 PROKR1Q8TCW9 393 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 IGFBPL1Q8WX77 278 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 RMDN1Q96DB5 314 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 LINC00615Q96LM1 132 aaPredicted RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 CCDC17Q96LX7 622 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 DGAT2Q96PD7 388 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 XAB2Q9HCS7 855 aaKnown RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 WDR6Q9NNW5 1121 aaKnown RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 TFCP2L1Q9NZI6 479 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 SELENONQ9NZV5 590 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 CPSF2Q9P2I0 782 aaKnown RBP4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 GTF3C4Q9UKN8 822 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 PLAGL1Q9UM63 463 aa4.35□□□□□ -1.71
HMGN3P1-201ENST00000453847 DDTLA6NHG4 134 aaPredicted RBP4.34□□□□□ -1.71
HMGN3P1-201ENST00000453847 HSPB2A8KAH6 182 aa4.34□□□□□ -1.71
HMGN3P1-201ENST00000453847 BTBD19C9JJ37 291 aa4.34□□□□□ -1.71
HMGN3P1-201ENST00000453847 H7C1Q1 480 aa4.34□□□□□ -1.71
HMGN3P1-201ENST00000453847 EBAG9O00559 213 aa4.34□□□□□ -1.71
HMGN3P1-201ENST00000453847 MGST3O14880 152 aa4.34□□□□□ -1.71
HMGN3P1-201ENST00000453847 HS6ST1O60243 411 aa4.34□□□□□ -1.71
HMGN3P1-201ENST00000453847 MITFO75030 526 aaPredicted RBP4.34□□□□□ -1.71
HMGN3P1-201ENST00000453847 ESRRBO95718 433 aa4.34□□□□□ -1.71
HMGN3P1-201ENST00000453847 GGPS1O95749 300 aa4.34□□□□□ -1.71
HMGN3P1-201ENST00000453847 MT-CYBP00156 380 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms