RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 C10orf120Q5SQS8 335 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 CCNJQ5T5M9 372 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 ANKRD40Q6AI12 368 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 PRMT9Q6P2P2 845 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 SLC51AQ86UW1 340 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 PTRH1Q86Y79 214 aaKnown RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 C2CD5Q86YS7 1000 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 TIGD4Q8IY51 512 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 PRSS58Q8IYP2 241 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 SLC37A3Q8NCC5 494 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 NCOA7Q8NI08 942 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 ST8SIA2Q92186 375 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 CYFIP2Q96F07 1278 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 CCDC17Q96LX7 622 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 PNKPQ96T60 521 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 SLC9A7Q96T83 725 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 FUCA2Q9BTY2 467 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 OSBPL6Q9BZF3 934 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 OR51B6Q9H340 312 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 NOL6Q9H6R4 1146 aaKnown RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 C10orf88Q9H8K7 445 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 ZNF395Q9H8N7 513 aaPredicted RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 CERS4Q9HA82 394 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 FBRSL1Q9HCM7 1045 aaKnown RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 KCNMB3Q9NPA1 279 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 THUMPD1Q9NXG2 353 aaKnown RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 NSMCE4AQ9NXX6 385 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 TMOD2Q9NZR1 351 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 H2AFY2Q9P0M6 372 aaPredicted RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 CFAP97Q9P2B7 532 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 CNOT11Q9UKZ1 510 aaKnown RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 PCDHA5Q9Y5H7 936 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 SNX13Q9Y5W8 968 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 SSH2Q76I76 1423 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 ATP10DQ9P241 1426 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 A0A1W2PQH9 124 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 SOBPA7XYQ1 873 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 AHRRA9YTQ3 701 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 H0YAE9 185 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 DVL2O14641 736 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 B4GAT1O43505 415 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 NOBOXO60393 691 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 OR7A10O76100 309 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 MBP02144 154 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 AFPP02771 609 aaKnown RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 FABP1P07148 127 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 STSP08842 583 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 CELA3AP09093 270 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 DHRS4L1P0CG22 281 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 SLC2A3P11169 496 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 VEGFAP15692 232 aaPredicted RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 LAG3P18627 525 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 NFKB1P19838 968 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 FGFR2P21802 821 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 CDC25AP30304 524 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 RRM2P31350 389 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 STX2P32856 288 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 ACAA2P42765 397 aaKnown RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 PTGIRP43119 386 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 RASSF2P50749 326 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 PRELPP51888 382 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 VAV2P52735 878 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 RAD23BP54727 409 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 PRKCQQ04759 706 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 CLCQ05315 142 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 CD300CQ08708 224 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 CHIT1Q13231 466 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 FAM189A2Q15884 450 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 PKDCCQ504Y2 493 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 PAGE2BQ5JRK9 111 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 PDSS1Q5T2R2 415 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 STRIP1Q5VSL9 837 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 RRAGBQ5VZM2 374 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 E4F1Q66K89 784 aaPredicted RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 CYP20A1Q6UW02 462 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 C5orf46Q6UWT4 87 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 RNF207Q6ZRF8 634 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 HTR3DQ70Z44 454 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 MTDHQ86UE4 582 aaKnown RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 KIF18BQ86Y91 864 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 DCP1BQ8IZD4 617 aaKnown RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 FAM109AQ8N4B1 249 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 MLKLQ8NB16 471 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 PRPF31Q8WWY3 499 aaKnown RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 PRCCQ92733 491 aaPredicted RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 MCRS1Q96EZ8 462 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 LMF1Q96S06 567 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 TRIM54Q9BYV2 358 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 IL1RAPL2Q9NP60 686 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 SNTG1Q9NSN8 517 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 CMTM6Q9NX76 183 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 MARK1Q9P0L2 795 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 DNAJB9Q9UBS3 223 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 IPO11Q9UI26 975 aaKnown RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 SLC24A2Q9UI40 661 aa5.02□□□□□ -1.61
EPHA3-202ENST00000452448 TRMT6Q9UJA5 497 aaKnown RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 AGO1Q9UL18 857 aaKnown RBP5.02□□□□□ -1.61
EPHA3-202ENST00000452448 ZNRF3Q9ULT6 936 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms