RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 DDR2Q16832 855 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 FAM98BQ52LJ0 330 aaKnown RBP11.64□□□□□ -0.55
PTCH1-208ENST00000430669 VPS50Q96JG6 964 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 TMEM161AQ9NX61 479 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 CROTQ9UKG9 612 aa11.64□□□□□ -0.55
PTCH1-208ENST00000430669 PFDN1O60925 122 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 IDO1P14902 403 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 PBX3P40426 434 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 CPA2P48052 419 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 CES3Q6UWW8 571 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 GMIPQ9P107 970 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 IGSF9Q9P2J2 1179 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 MFSD11O43934 449 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 ALOX15P16050 662 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-208ENST00000430669 SKIV2LQ15477 1246 aaKnown RBP11.63□□□□□ -0.55
PTCH1-208ENST00000430669 UPF1Q92900 1129 aaKnown RBP eCLIP11.63□□□□□ -0.55
PTCH1-208ENST00000430669 COPS7BQ9H9Q2 264 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-208ENST00000430669 AP4S1Q9Y587 144 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 TTC3P53804 2025 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 GNG14A0A1W2PPG7 69 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 KCNU1A8MYU2 1149 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 M0R3G1 203 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 IL10RBQ08334 325 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 RNF168Q8IYW5 571 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-208ENST00000430669 KAT2BQ92831 832 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 TIFAQ96CG3 184 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 DTNBP1Q96EV8 351 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 CAPNS2Q96L46 248 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 ZFP42Q96MM3 310 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 NLNQ9BYT8 704 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 PRRG3Q9BZD7 231 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 EPS8L2Q9H6S3 715 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 SMPD4Q9NXE4 827 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 ADAMTS5Q9UNA0 930 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 NR2E3Q9Y5X4 410 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 RGSL1A5PLK6 1076 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 GLUD1P00367 558 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 DDX6P26196 483 aaKnown RBP eCLIP11.63□□□□□ -0.55
PTCH1-208ENST00000430669 PPP2R1BP30154 601 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 TMEM259Q4ZIN3 620 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 FBXL19Q6PCT2 694 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 ZBED3Q96IU2 234 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-208ENST00000430669 CCDC90BQ9GZT6 254 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 VPS51Q9UID3 782 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 C1QTNF3-AMACRE9PGA6 284 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 PCNAP12004 261 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 DNAJB1P25685 340 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 ZNF132P52740 706 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 PLOD1Q02809 727 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-208ENST00000430669 FAM46CQ5VWP2 391 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 CPT1BQ92523 772 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 QRFPRQ96P65 431 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 A0A1B0GVM2 712 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 TCAF2A6NFQ2 919 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 GUCY1B2O75343 617 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 TFE3P19532 575 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-208ENST00000430669 CXCR2P25025 360 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 FASP25445 335 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 CDK18Q07002 472 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 PHC3Q8NDX5 983 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 CD99L2Q8TCZ2 262 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 OSBPL2Q9H1P3 480 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 ZDHHC6Q9H6R6 413 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 MYO16Q9Y6X6 1858 aa11.63□□□□□ -0.55
PTCH1-208ENST00000430669 GREB1LQ9C091 1923 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-208ENST00000430669 RPP40O75818 363 aaKnown RBP11.62□□□□□ -0.55
PTCH1-208ENST00000430669 OR1D2P34982 312 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 GPD2P43304 727 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 SLC34A1Q06495 639 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 PFKFB4Q16877 469 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 CERS6Q6ZMG9 384 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 METTL6Q8TCB7 284 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 CD101Q93033 1021 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 SFMBT1Q9UHJ3 866 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 DYRK3O43781 588 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 CCNT2O60583 730 aaKnown RBP11.62□□□□□ -0.55
PTCH1-208ENST00000430669 USP12O75317 370 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 ME2P23368 584 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 RRM2P31350 389 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 GJA9P57773 515 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 TAF10Q12962 218 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 SOWAHAQ2M3V2 549 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 FNBP1LQ5T0N5 605 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 ECHDC2Q86YB7 292 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 STX19Q8N4C7 294 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 TMCO5AQ8N6Q1 288 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 CATSPER2Q96P56 530 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 ARMC7Q9H6L4 198 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 GOLGA2P5Q9HBQ8 144 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 KCNH1O95259 989 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 TMEM154Q6P9G4 183 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 ZNF438Q7Z4V0 828 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 DPF3Q92784 378 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 NEUROG2Q9H2A3 272 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 ASB8Q9H765 288 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 SCML2Q9UQR0 700 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 TRPM7Q96QT4 1865 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 MYO1GB0I1T2 1018 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 TLL1O43897 1013 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 ANXA5P08758 320 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms