RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 FAM114A1Q8IWE2 563 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 RXFP2Q8WXD0 754 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 NAT6Q93015 286 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 TBATAQ96M53 351 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 OSBPL1AQ9BXW6 950 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 STK33Q9BYT3 514 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 CLPBQ9H078 707 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 RETREG1Q9H6L5 497 aa13.98□□□□□ -0.17
CXCL12-202ENST00000374426 MBNL1Q9NR56 388 aaKnown RBP13.98□□□□□ -0.17
CXCL12-202ENST00000374426 NOCTQ9UK39 431 aaKnown RBP13.98□□□□□ -0.17
CXCL12-202ENST00000374426 J3QKU1 62 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 K7ENP7 123 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 YY2O15391 372 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 MMP20O60882 483 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 RAMP2O60895 175 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 TSHRP16473 764 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 ITIH2P19823 946 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 MMP8P22894 467 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 SDC4P31431 198 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 RPIAP49247 311 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 UBE2HP62256 183 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 YPEL5P62699 121 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 DPCR1Q3MIW9 517 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 ARL13BQ3SXY8 428 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 INO80CQ6PI98 192 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-202ENST00000374426 FOXR1Q6PIV2 292 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 GDPD4Q6W3E5 623 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 MACC1Q6ZN28 852 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 PHLDB2Q86SQ0 1253 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 TTC7BQ86TV6 843 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 TP53I13Q8NBR0 393 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-202ENST00000374426 JOSD2Q8TAC2 188 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 GPT2Q8TD30 523 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 SLC20A1Q8WUM9 679 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 GLMNQ92990 594 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 TBC1D31Q96DN5 1066 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 CCDC3Q9BQI4 270 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 SLC13A1Q9BZW2 595 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 HPCAL4Q9UM19 191 aa13.97□□□□□ -0.17
CXCL12-202ENST00000374426 C2CD4BA6NLJ0 364 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 PES1O00541 588 aaKnown RBP13.96□□□□□ -0.17
CXCL12-202ENST00000374426 NTN3O00634 580 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-202ENST00000374426 KDELR3O43731 214 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 TM7SF2O76062 418 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 TMCC1O94876 653 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 TNFSF15O95150 251 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 GJB6O95452 261 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 CYP1A1P04798 512 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-202ENST00000374426 ANXA6P08133 673 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 CELA2BP08218 269 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-202ENST00000374426 PLEKP08567 350 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-202ENST00000374426 EIF4A3P38919 411 aaKnown RBP13.96□□□□□ -0.17
CXCL12-202ENST00000374426 PTPN9P43378 593 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 HDAC4P56524 1084 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 PPARDQ03181 441 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 KLHL40Q2TBA0 621 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 FAXCQ5TGI0 409 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 STRADAQ7RTN6 431 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 CLEC14AQ86T13 490 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 ARL14Q8N4G2 192 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 CCDC185Q8N715 623 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 NETO2Q8NC67 525 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 WDR36Q8NI36 951 aaKnown RBP13.96□□□□□ -0.17
CXCL12-202ENST00000374426 WDR48Q8TAF3 677 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 CENPIQ92674 756 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-202ENST00000374426 CCDC97Q96F63 343 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-202ENST00000374426 GDAP1L1Q96MZ0 367 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 EPAS1Q99814 870 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 WRAP53Q9BUR4 548 aaKnown RBP13.96□□□□□ -0.17
CXCL12-202ENST00000374426 TTYH3Q9C0H2 523 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 NOL6Q9H6R4 1146 aaKnown RBP13.96□□□□□ -0.17
CXCL12-202ENST00000374426 PADI4Q9UM07 663 aa13.96□□□□□ -0.17
CXCL12-202ENST00000374426 CCDC187A0A096LP49 1063 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 TOR1BO14657 336 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 BUB1O43683 1085 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 C6P13671 934 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 TIMP2P16035 220 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 CHRNB2P17787 502 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 MLLT3P42568 568 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-202ENST00000374426 FMO1Q01740 532 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 CLN3Q13286 438 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 SPIDRQ14159 915 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 IRF4Q15306 451 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 KIAA1614Q5VZ46 1190 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 ESRP1Q6NXG1 681 aaKnown RBP13.95□□□□□ -0.18
CXCL12-202ENST00000374426 ZNF677Q86XU0 584 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 SLC30A5Q8TAD4 765 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 CXorf40AQ8TE69 158 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 C11orf70Q9BRQ4 267 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 C1QTNF7Q9BXJ2 289 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 KLC2Q9H0B6 622 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 GANQ9H2C0 597 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 SAMSN1Q9NSI8 373 aaKnown RBP13.95□□□□□ -0.18
CXCL12-202ENST00000374426 DKK3Q9UBP4 350 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 RABGEF1Q9UJ41 708 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 MFHAS1Q9Y4C4 1052 aa13.95□□□□□ -0.18
CXCL12-202ENST00000374426 ZSCAN5CA6NGD5 496 aaPredicted RBP13.94□□□□□ -0.18
CXCL12-202ENST00000374426 B8ZZF3 427 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 GFPT2O94808 682 aa13.94□□□□□ -0.18
CXCL12-202ENST00000374426 ITGA2BP08514 1039 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 985 ms