RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PLEKHF1Q96S99 279 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 TMEM39BQ9GZU3 492 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 MOCS1Q9NZB8 636 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 BTRCQ9Y297 605 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 H3BNH8 94 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 M0R036 132 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 RIPK2O43353 540 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 USP12O75317 370 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 IFNGP01579 166 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 SRCP12931 536 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 CAV3P56539 151 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 ADSSL1Q8N142 457 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 DNAJA4Q8WW22 397 aaPredicted RBP16.52■□□□□ 0.23
PTCH1-201ENST00000331920 ETAA1Q9NY74 926 aa16.52■□□□□ 0.23
PTCH1-201ENST00000331920 GRIN2AQ12879 1464 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 QSOX1O00391 747 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 ADSSP30520 456 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 ZNF543Q08ER8 600 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 ZNF234Q14588 700 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 MEA1Q16626 185 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 AGPAT3Q9NRZ7 376 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 SAMD4AQ9UPU9 718 aaKnown RBP16.51■□□□□ 0.23
PTCH1-201ENST00000331920 HIF3AQ9Y2N7 669 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 IL1BP01584 269 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 NPR2P20594 1047 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 SLC6A2P23975 617 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 ELK3P41970 407 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 CDH17Q12864 832 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 ZNF730Q6ZMV8 503 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 GALNT7Q86SF2 657 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
PTCH1-201ENST00000331920 KBTBD8Q8NFY9 601 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 MTMR4Q9NYA4 1195 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 SEPHS1P49903 392 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 IRGCQ6NXR0 463 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 DEPDC4Q8N2C3 294 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 PPP1R16AQ96I34 528 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 DNMT3LQ9UJW3 386 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 AKAP8O43823 692 aaKnown RBP16.51■□□□□ 0.23
PTCH1-201ENST00000331920 DHFRP00374 187 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 SSTR1P30872 391 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 MASP1P48740 699 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 EN1Q05925 392 aaPredicted RBP16.51■□□□□ 0.23
PTCH1-201ENST00000331920 ZFP28Q8NHY6 868 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 PDGFDQ9GZP0 370 aaPredicted RBP16.51■□□□□ 0.23
PTCH1-201ENST00000331920 FBXO44Q9H4M3 255 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 FLT1P17948 1338 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 OR1I1O60431 355 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 ASMTP46597 345 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 MAPKAPK3Q16644 382 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 STOX1Q6ZVD7 989 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 TRIM43Q96BQ3 446 aaPredicted RBP16.51■□□□□ 0.23
PTCH1-201ENST00000331920 KLHL5Q96PQ7 755 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 NRP2O60462 931 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 PEX11AO75192 247 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 RTL4Q6ZR62 310 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 PAGE2Q7Z2X7 111 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 ADCY4Q8NFM4 1077 aa16.51■□□□□ 0.23
PTCH1-201ENST00000331920 MICAL2O94851 1124 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 PGAM1P18669 254 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 TSPAN5P62079 268 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 OR2L8Q8NGY9 312 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 OSMRQ99650 979 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 TUT1Q9H6E5 874 aaKnown RBP16.5■□□□□ 0.23
PTCH1-201ENST00000331920 CASZ1Q86V15 1759 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 ATP10AO60312 1499 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 ITGA2P17301 1181 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 DGKAP23743 735 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 CRADDP78560 199 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 CCNG2Q16589 344 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 CDKL4Q5MAI5 379 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 UBE2R2Q712K3 238 aaPredicted RBP16.5■□□□□ 0.23
PTCH1-201ENST00000331920 MED28Q9H204 178 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 MCCC2Q9HCC0 563 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 OSGEPQ9NPF4 335 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 ATPIF1Q9UII2 106 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 HOXA2O43364 376 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 CCZ1BP86790 482 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 CCZ1P86791 482 aaPredicted RBP16.5■□□□□ 0.23
PTCH1-201ENST00000331920 PTPAQ15257 358 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 RIMKLBQ9ULI2 386 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 URADA6NGE7 173 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 TRDMT1O14717 391 aaKnown RBP16.5■□□□□ 0.23
PTCH1-201ENST00000331920 IFI30P13284 250 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 AMPD1P23109 780 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 TNK2Q07912 1038 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 GIPC3Q8TF64 312 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 TMEM39AQ9NV64 488 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 FAM240BA0A1B0GVZ2 78 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 A0A1W2PQJ5 194 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 MYBL2P10244 700 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 GDI2P50395 445 aaKnown RBP16.5■□□□□ 0.23
PTCH1-201ENST00000331920 MPZL3Q6UWV2 235 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 RBM44Q6ZP01 1051 aaKnown RBP16.5■□□□□ 0.23
PTCH1-201ENST00000331920 ZNF611Q8N823 705 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 BRSK1Q8TDC3 778 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 ANKRD27Q96NW4 1050 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 NDNQ99608 321 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 RGSL1A5PLK6 1076 aa16.5■□□□□ 0.23
PTCH1-201ENST00000331920 C5orf51A6NDU8 294 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms