RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 NOL4O94818 638 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 EPN2O95208 641 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 FGFR1P11362 822 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 COX7A2P14406 83 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 RAB10P61026 200 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 ACSBG2Q5FVE4 666 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 NT5DC4Q86YG4 428 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 PROX1Q92786 737 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 TNFRSF25Q93038 417 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 KREMEN1Q96MU8 473 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 POLR1EQ9GZS1 481 aaKnown RBP16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 EBF3Q9H4W6 596 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 SPACA6W5XKT8 324 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 HOXB8P17481 243 aaPredicted RBP16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 TYMPP19971 482 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 PAICSP22234 425 aaKnown RBP16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 BMT2Q1RMZ1 405 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 TIMM50Q3ZCQ8 353 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 LIPMQ5VYY2 423 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 HPS6Q86YV9 775 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 PDPRQ8NCN5 879 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 JOSD2Q8TAC2 188 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 ZFP14Q9HCL3 533 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 LEF1Q9UJU2 399 aaPredicted RBP16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 WASF2Q9Y6W5 498 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 DHRS12A0PJE2 317 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 PAPSS1O43252 624 aaPredicted RBP16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 BPGMP07738 259 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 SLC7A2P52569 658 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 MARSP56192 900 aaKnown RBP16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 CRY1Q16526 586 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 NCCRP1Q6ZVX7 275 aaPredicted RBP16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 VSIG10LQ86VR7 867 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 SELENOMQ8WWX9 145 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 UBA1P22314 1058 aaKnown RBP16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 FECHP22830 423 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 YWHAQP27348 245 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 PRKCQQ04759 706 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 PIGZQ86VD9 579 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 HERC6Q8IVU3 1022 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 OR52K2Q8NGK3 314 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 RPS6KB2Q9UBS0 482 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 UBA2Q9UBT2 640 aaPredicted RBP16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 MORF4L1Q9UBU8 362 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 DNAJB4Q9UDY4 337 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 GMPPBQ9Y5P6 360 aa16.59■□□□□ 0.25
SH3RF1-201ENST00000284637 MOXD2PA6NHM9 499 aa16.58■□□□□ 0.25
SH3RF1-201ENST00000284637 PTPN1P18031 435 aaKnown RBP16.58■□□□□ 0.25
SH3RF1-201ENST00000284637 POLD2P49005 469 aa16.58■□□□□ 0.25
SH3RF1-201ENST00000284637 SLC5A3P53794 718 aa16.58■□□□□ 0.25
SH3RF1-201ENST00000284637 MAPKAPK3Q16644 382 aa16.58■□□□□ 0.25
SH3RF1-201ENST00000284637 WSCD1Q658N2 575 aa16.58■□□□□ 0.25
SH3RF1-201ENST00000284637 KIAA0319LQ8IZA0 1049 aa16.58■□□□□ 0.25
SH3RF1-201ENST00000284637 CDYL2Q8N8U2 506 aa16.58■□□□□ 0.25
SH3RF1-201ENST00000284637 IL31RAQ8NI17 732 aa16.58■□□□□ 0.25
SH3RF1-201ENST00000284637 SENP8Q96LD8 212 aa16.58■□□□□ 0.25
SH3RF1-201ENST00000284637 CITED4Q96RK1 184 aa16.58■□□□□ 0.25
SH3RF1-201ENST00000284637 COG5Q9UP83 839 aa16.58■□□□□ 0.25
SH3RF1-201ENST00000284637 SIN3BO75182 1162 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 TGDSO95455 350 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 NADKO95544 446 aaPredicted RBP16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 LINGO3P0C6S8 592 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 CCNB1P14635 433 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 MTX3Q5HYI7 312 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 C12orf29Q8N999 325 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 ZNF540Q8NDQ6 660 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 MKL1Q969V6 931 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 KLHL32Q96NJ5 620 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 P2RX7Q99572 595 aaKnown RBP16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 ZNF670Q9BS34 389 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 ARMC7Q9H6L4 198 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 ZNF624Q9P2J8 865 aaPredicted RBP16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 ENOPH1Q9UHY7 261 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 C3orf18Q9UK00 162 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 CELF2O95319 508 aaKnown RBP16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 CDH13P55290 713 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 ZFP69Q49AA0 526 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 FAM180AQ6UWF9 173 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 FAM45AQ8TCE6 357 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 MRPL57Q9BQC6 102 aaKnown RBP16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 TRIM8Q9BZR9 551 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 ELOVL4Q9GZR5 314 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 CDH19Q9H159 772 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 HSD3B7Q9H2F3 369 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 PCDH12Q9NPG4 1184 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 ACSS2Q9NR19 701 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 AHSPQ9NZD4 102 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 NFASCO94856 1347 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 TBX10O75333 385 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 ZHX1-C8orf76Q96EF9 292 aa16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 MRPL39Q9NYK5 338 aaKnown RBP16.58■□□□□ 0.24
SH3RF1-201ENST00000284637 SLC39A12Q504Y0 691 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 TMEM110Q86TL2 294 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 PALB2Q86YC2 1186 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 HIPK1Q86Z02 1210 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 GAD1Q99259 594 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 FAM126AQ9BYI3 521 aaPredicted RBP16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 MBD2Q9UBB5 411 aa16.57■□□□□ 0.24
SH3RF1-201ENST00000284637 ZNF221Q9UK13 617 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms